RNA–Protein interactions for RNA: YIL135C

VHS2, Transcript of Regulator of septin dynamics, yeast

Gene VHS2, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHS2	YIL135C	YMD8	Q03697	442 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	MYO5	Q04439	1219 aa	Known RBP	4.78	□□□□□ -1.64
VHS2	YIL135C	APC4	Q04601	652 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	ENT4	Q07872	247 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	DIS3	Q08162	1001 aa	Known RBP	4.78	□□□□□ -1.64
VHS2	YIL135C	CSM4	Q08955	156 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	ATG9	Q12142	997 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	YLR108C	Q12259	485 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	RTR2	Q12378	196 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	ATG31	Q12421	196 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	FMP16	Q12497	93 aa		4.78	□□□□□ -1.64
VHS2	YIL135C	HTZ1	Q12692	134 aa	Known RBP	4.78	□□□□□ -1.64
VHS2	YIL135C	REP1	P03871	373 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	PDE2	P06776	526 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	CDC33	P07260	213 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	MATALPHA1	P0CY06	175 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	HMLALPHA1	P0CY07	175 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	REV1	P12689	985 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	FRS1	P15624	595 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	FRS2	P15625	503 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	VMA16	P23968	213 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	RPL24B	P24000	155 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	SWI4	P25302	1093 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	CWP1	P28319	239 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	PRR1	P28708	518 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	CAM1	P29547	415 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	SYN8	P31377	255 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	DGR2	P32330	852 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	NTH1	P32356	751 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	MRP20	P32387	263 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	PRP21	P32524	280 aa	Predicted RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	SPS19	P32573	292 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	RAD5	P32849	1169 aa	Predicted RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	YPT7	P32939	208 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	MRPL7	P36519	292 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	THI2	P38141	450 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	SRP68	P38687	599 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	RRP3	P38712	501 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	RPH1	P39956	796 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	YER121W	P40076	114 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	YMR147W	P40218	223 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	TOS3	P43637	560 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	RPS7B	P48164	190 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	SOL4	P53315	255 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	PRP38	Q00723	242 aa	Predicted RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	RPA49	Q01080	415 aa	Predicted RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	ACS1	Q01574	713 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	UTP6	Q02354	440 aa	Known RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	SKI8	Q02793	397 aa	Predicted RBP	4.77	□□□□□ -1.65
VHS2	YIL135C	PPN1	Q04119	674 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	SMA2	Q04658	369 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	RFU1	Q08003	200 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	GPM2	Q12008	311 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	COX17	Q12287	69 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	AI5_BETA	Q9ZZX0	354 aa		4.77	□□□□□ -1.65
VHS2	YIL135C	ATP2	P00830	511 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	SPT3	P06844	337 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
VHS2	YIL135C	NHP6A	P11632	93 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	PEP5	P12868	1029 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	ABF1	P14164	731 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	SAR1	P20606	190 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	MRPS28	P21771	286 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	FEN2	P25621	512 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	FUB1	P25659	250 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	ITR2	P30606	609 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	TUL1	P36096	758 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	YBR139W	P38109	508 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	ECM8	P38246	354 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	YNG2	P38806	282 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	ALG8	P40351	577 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	YKE4	P40544	346 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	IRC5	P43610	853 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	ECM27	P47144	725 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	RFX1	P48743	811 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	MTD1	Q02046	320 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	SKO1	Q02100	647 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	UBP16	Q02863	499 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	FAR8	Q05040	523 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	HCR1	Q05775	265 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	YPR127W	Q06494	345 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	YEH1	Q07804	573 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	THP3	Q12049	470 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	LYS21	Q12122	440 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	RPN6	Q12377	434 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	SNF8	Q12483	233 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	ARP6	Q12509	438 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	DCP1	Q12517	231 aa	Predicted RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	YJR112W-A	Q3E743	109 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	Q0144	Q9ZZW2	109 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	FLO1	P32768	1537 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	GCN1	P33892	2672 aa	Known RBP	4.76	□□□□□ -1.65
VHS2	YIL135C	IRA2	P19158	3079 aa		4.76	□□□□□ -1.65
VHS2	YIL135C	TPK2	P06245	380 aa		4.75	□□□□□ -1.65
VHS2	YIL135C	RPL4A	P10664	362 aa	Known RBP	4.75	□□□□□ -1.65
VHS2	YIL135C	CBS2	P14905	389 aa		4.75	□□□□□ -1.65
VHS2	YIL135C	URA4	P20051	364 aa		4.75	□□□□□ -1.65
VHS2	YIL135C	AAT2	P23542	418 aa	Known RBP	4.75	□□□□□ -1.65
VHS2	YIL135C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
VHS2	YIL135C	GCD7	P32502	381 aa	Predicted RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 440.6 ms