RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C SFG1Q12507 346 aa3.23□□□□□ -1.89
MSM1YGR171C RMD5Q12508 421 aa3.23□□□□□ -1.89
MSM1YGR171C MAS1P10507 462 aa3.22□□□□□ -1.89
MSM1YGR171C MTF1P14908 341 aaKnown RBP3.22□□□□□ -1.89
MSM1YGR171C YCR022CP25620 114 aa3.22□□□□□ -1.89
MSM1YGR171C ICL1P28240 557 aaPredicted RBP3.22□□□□□ -1.89
MSM1YGR171C NDC1P32500 655 aa3.22□□□□□ -1.89
MSM1YGR171C GLC7P32598 312 aaKnown RBP3.22□□□□□ -1.89
MSM1YGR171C RGT1P32862 1170 aa3.22□□□□□ -1.89
MSM1YGR171C SPT10P35208 640 aa3.22□□□□□ -1.89
MSM1YGR171C RPC37P36121 282 aa3.22□□□□□ -1.89
MSM1YGR171C YBR056WP38081 501 aa3.22□□□□□ -1.89
MSM1YGR171C AIM10P39965 576 aaKnown RBP3.22□□□□□ -1.89
MSM1YGR171C HAT2P39984 401 aa3.22□□□□□ -1.89
MSM1YGR171C ALD5P40047 520 aaKnown RBP3.22□□□□□ -1.89
MSM1YGR171C SHO1P40073 367 aa3.22□□□□□ -1.89
MSM1YGR171C SNM1P40993 198 aa3.22□□□□□ -1.89
MSM1YGR171C LOH1P47055 219 aa3.22□□□□□ -1.89
MSM1YGR171C MND1P53102 219 aa3.22□□□□□ -1.89
MSM1YGR171C YNR048WP53740 393 aa3.22□□□□□ -1.89
MSM1YGR171C RPM2Q02773 1202 aa3.22□□□□□ -1.89
MSM1YGR171C ERV41Q04651 352 aa3.22□□□□□ -1.89
MSM1YGR171C ECM7Q06200 448 aa3.22□□□□□ -1.89
MSM1YGR171C YLR173WQ06247 608 aa3.22□□□□□ -1.89
MSM1YGR171C PEX27Q08580 376 aa3.22□□□□□ -1.89
MSM1YGR171C RNH203Q12338 110 aa3.22□□□□□ -1.89
MSM1YGR171C DCP1Q12517 231 aaPredicted RBP3.22□□□□□ -1.89
MSM1YGR171C TEF1P02994 458 aaKnown RBP3.22□□□□□ -1.89
MSM1YGR171C UNG1P12887 359 aa3.22□□□□□ -1.89
MSM1YGR171C RSR1P13856 272 aa3.22□□□□□ -1.89
MSM1YGR171C SAG1P20840 650 aa3.22□□□□□ -1.89
MSM1YGR171C MRPL25P23369 157 aa3.22□□□□□ -1.89
MSM1YGR171C TIP1P27654 210 aaPredicted RBP3.22□□□□□ -1.89
MSM1YGR171C CBF5P33322 483 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
MSM1YGR171C SKN1P33336 771 aa3.22□□□□□ -1.89
MSM1YGR171C TPO5P36029 618 aa3.22□□□□□ -1.89
MSM1YGR171C YKL070WP36087 169 aa3.22□□□□□ -1.89
MSM1YGR171C ATM1P40416 690 aa3.22□□□□□ -1.89
MSM1YGR171C SNL1P40548 159 aa3.22□□□□□ -1.89
MSM1YGR171C RAD17P48581 401 aa3.22□□□□□ -1.89
MSM1YGR171C AVT4P50944 713 aa3.22□□□□□ -1.89
MSM1YGR171C ARK1P53974 638 aa3.22□□□□□ -1.89
MSM1YGR171C CAB5Q03941 241 aa3.22□□□□□ -1.89
MSM1YGR171C URC2Q04411 772 aa3.22□□□□□ -1.89
MSM1YGR171C RRG8Q06109 277 aa3.22□□□□□ -1.89
MSM1YGR171C BOP2Q06150 570 aa3.22□□□□□ -1.89
MSM1YGR171C AAD15Q08361 143 aa3.22□□□□□ -1.89
MSM1YGR171C TIM18Q08749 192 aa3.22□□□□□ -1.89
MSM1YGR171C DAP1Q12091 152 aa3.22□□□□□ -1.89
MSM1YGR171C LDB17Q12342 491 aa3.22□□□□□ -1.89
MSM1YGR171C ADF1Q2V2Q1 113 aa3.22□□□□□ -1.89
MSM1YGR171C RPL12AP0CX53 165 aaKnown RBP3.21□□□□□ -1.9
MSM1YGR171C RPL12BP0CX54 165 aa3.21□□□□□ -1.9
MSM1YGR171C MRS3P10566 314 aa3.21□□□□□ -1.9
MSM1YGR171C PRP16P15938 1071 aaPredicted RBP3.21□□□□□ -1.9
MSM1YGR171C SPO12P17123 173 aa3.21□□□□□ -1.9
MSM1YGR171C CDC42P19073 191 aa3.21□□□□□ -1.9
MSM1YGR171C SLM5P25345 492 aaKnown RBP3.21□□□□□ -1.9
MSM1YGR171C PSO2P30620 661 aa3.21□□□□□ -1.9
MSM1YGR171C EFB1P32471 206 aaKnown RBP3.21□□□□□ -1.9
MSM1YGR171C DOA4P32571 926 aa3.21□□□□□ -1.9
MSM1YGR171C YHR177WP38867 453 aa3.21□□□□□ -1.9
MSM1YGR171C MMF1P40185 145 aaKnown RBP3.21□□□□□ -1.9
MSM1YGR171C RTT101P47050 842 aa3.21□□□□□ -1.9
MSM1YGR171C SSN8P47821 323 aa3.21□□□□□ -1.9
MSM1YGR171C POP6P53218 158 aa3.21□□□□□ -1.9
MSM1YGR171C MRP51Q02950 344 aa3.21□□□□□ -1.9
MSM1YGR171C MRPL35Q06678 367 aa3.21□□□□□ -1.9
MSM1YGR171C TY3A-GQ12173 290 aa3.21□□□□□ -1.9
MSM1YGR171C PKH2Q12236 1081 aaKnown RBP3.21□□□□□ -1.9
MSM1YGR171C TY3A-IQ99219 290 aa3.21□□□□□ -1.9
MSM1YGR171C OPI3P05375 206 aa3.2□□□□□ -1.9
MSM1YGR171C KSS1P14681 368 aa3.2□□□□□ -1.9
MSM1YGR171C PRO3P32263 286 aaKnown RBP3.2□□□□□ -1.9
MSM1YGR171C MEI5P32489 222 aa3.2□□□□□ -1.9
MSM1YGR171C SUA5P32579 426 aa3.2□□□□□ -1.9
MSM1YGR171C PAD1P33751 242 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
MSM1YGR171C PTK1P36002 662 aaPredicted RBP3.2□□□□□ -1.9
MSM1YGR171C ALG8P40351 577 aa3.2□□□□□ -1.9
MSM1YGR171C INA22P40576 216 aa3.2□□□□□ -1.9
MSM1YGR171C PIR3Q03180 325 aa3.2□□□□□ -1.9
MSM1YGR171C HCR1Q05775 265 aaKnown RBP3.2□□□□□ -1.9
MSM1YGR171C SMD2Q06217 110 aaKnown RBP3.2□□□□□ -1.9
MSM1YGR171C GPN3Q06543 272 aa3.2□□□□□ -1.9
MSM1YGR171C VAC14Q06708 880 aa3.2□□□□□ -1.9
MSM1YGR171C SRL2Q12020 392 aa3.2□□□□□ -1.9
MSM1YGR171C CAR2P07991 424 aaKnown RBP3.19□□□□□ -1.9
MSM1YGR171C YLL053CP0CD98 152 aa3.19□□□□□ -1.9
MSM1YGR171C SAM2P19358 384 aaKnown RBP3.19□□□□□ -1.9
MSM1YGR171C ITR1P30605 584 aa3.19□□□□□ -1.9
MSM1YGR171C BMH2P34730 273 aaKnown RBP3.19□□□□□ -1.9
MSM1YGR171C RPC25P35718 212 aa3.19□□□□□ -1.9
MSM1YGR171C MTC4P38335 694 aaKnown RBP3.19□□□□□ -1.9
MSM1YGR171C ALP1P38971 573 aa3.19□□□□□ -1.9
MSM1YGR171C MST28P39552 234 aa3.19□□□□□ -1.9
MSM1YGR171C RRT5P43607 289 aa3.19□□□□□ -1.9
MSM1YGR171C YGL242CP53066 181 aa3.19□□□□□ -1.9
MSM1YGR171C YNL247WP53852 767 aaKnown RBP3.19□□□□□ -1.9
MSM1YGR171C MDM36Q06820 579 aa3.19□□□□□ -1.9
MSM1YGR171C YPL199CQ08954 240 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms