RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W PFS1P38872 237 aa1.12□□□□□ -2.23
CUL3YGR003W AEP3Q12089 606 aa1.12□□□□□ -2.23
CUL3YGR003W CDC50P25656 391 aa1.12□□□□□ -2.23
CUL3YGR003W IES6P32617 166 aa1.12□□□□□ -2.23
CUL3YGR003W MRPL27P36526 146 aaPredicted RBP1.12□□□□□ -2.23
CUL3YGR003W OM14P38325 134 aa1.12□□□□□ -2.23
CUL3YGR003W NOC2P39744 710 aaKnown RBP1.12□□□□□ -2.23
CUL3YGR003W EFM4P40516 257 aa1.12□□□□□ -2.23
CUL3YGR003W YFR057WP43625 151 aa1.12□□□□□ -2.23
CUL3YGR003W CTK3P46963 296 aaPredicted RBP1.12□□□□□ -2.23
CUL3YGR003W YGR117CP53270 476 aa1.12□□□□□ -2.23
CUL3YGR003W SPR6Q01684 191 aa1.12□□□□□ -2.23
CUL3YGR003W RNY1Q02933 434 aaKnown RBP1.12□□□□□ -2.23
CUL3YGR003W ASA1Q06822 443 aa1.12□□□□□ -2.23
CUL3YGR003W YPR091CQ06833 770 aa1.12□□□□□ -2.23
CUL3YGR003W FCY22Q12119 530 aa1.12□□□□□ -2.23
CUL3YGR003W EAF3Q12432 401 aa1.12□□□□□ -2.23
CUL3YGR003W YBL111CQ3E7Y5 667 aa1.12□□□□□ -2.23
CUL3YGR003W ATP1P07251 545 aaKnown RBP1.11□□□□□ -2.23
CUL3YGR003W MDH1P17505 334 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
CUL3YGR003W SEH1P53011 349 aaKnown RBP1.11□□□□□ -2.23
CUL3YGR003W YGR111WP53265 400 aa1.11□□□□□ -2.23
CUL3YGR003W MDG1P53885 366 aa1.11□□□□□ -2.23
CUL3YGR003W NOP6Q07623 225 aaKnown RBP1.11□□□□□ -2.23
CUL3YGR003W SMC5Q08204 1093 aa1.11□□□□□ -2.23
CUL3YGR003W YDL199CQ12407 687 aa1.11□□□□□ -2.23
CUL3YGR003W PAB1P04147 577 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
CUL3YGR003W FUN26P31381 517 aa1.11□□□□□ -2.23
CUL3YGR003W NRP1P32770 719 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
CUL3YGR003W ATP3P38077 311 aaKnown RBP1.11□□□□□ -2.23
CUL3YGR003W MMF1P40185 145 aaKnown RBP1.11□□□□□ -2.23
CUL3YGR003W DFG10P40526 253 aa1.11□□□□□ -2.23
CUL3YGR003W PIB2P53191 635 aa1.11□□□□□ -2.23
CUL3YGR003W RRP46P53256 223 aaPredicted RBP1.11□□□□□ -2.23
CUL3YGR003W IGO1P53897 168 aa1.11□□□□□ -2.23
CUL3YGR003W SKI8Q02793 397 aaPredicted RBP1.11□□□□□ -2.23
CUL3YGR003W URC2Q04411 772 aa1.11□□□□□ -2.23
CUL3YGR003W PIN3Q06449 215 aa1.11□□□□□ -2.23
CUL3YGR003W CMS1Q07897 291 aaKnown RBP1.11□□□□□ -2.23
CUL3YGR003W GAT3Q07928 141 aa1.11□□□□□ -2.23
CUL3YGR003W CEX1Q12453 761 aa1.11□□□□□ -2.23
CUL3YGR003W PHO91P27514 894 aa1.1□□□□□ -2.23
CUL3YGR003W MCR1P36060 302 aaKnown RBP1.1□□□□□ -2.23
CUL3YGR003W HAC1P41546 238 aa1.1□□□□□ -2.23
CUL3YGR003W CIN2P46670 268 aa1.1□□□□□ -2.23
CUL3YGR003W YPS5P53057 165 aa1.1□□□□□ -2.23
CUL3YGR003W MED2Q12124 431 aa1.1□□□□□ -2.23
CUL3YGR003W ISA2Q12425 185 aa1.1□□□□□ -2.23
CUL3YGR003W YBR056W-AI2HB52 66 aa1.09□□□□□ -2.23
CUL3YGR003W RPL1AP0CX43 217 aaKnown RBP1.09□□□□□ -2.23
CUL3YGR003W RPL1BP0CX44 217 aaKnown RBP1.09□□□□□ -2.23
CUL3YGR003W ZRC1P20107 442 aa1.09□□□□□ -2.23
CUL3YGR003W CMK2P22517 447 aa1.09□□□□□ -2.23
CUL3YGR003W PDC2P32896 925 aa1.09□□□□□ -2.23
CUL3YGR003W SPO23P33757 523 aa1.09□□□□□ -2.23
CUL3YGR003W TIR2P33890 251 aa1.09□□□□□ -2.23
CUL3YGR003W MID2P36027 376 aa1.09□□□□□ -2.23
CUL3YGR003W OLA1P38219 394 aaKnown RBP1.09□□□□□ -2.23
CUL3YGR003W SPP381P38282 291 aaPredicted RBP1.09□□□□□ -2.23
CUL3YGR003W YGL262WP53054 175 aa1.09□□□□□ -2.23
CUL3YGR003W GYL1Q04322 720 aa1.09□□□□□ -2.23
CUL3YGR003W NDE2Q07500 545 aa1.09□□□□□ -2.23
CUL3YGR003W DCI1Q08558 271 aa1.09□□□□□ -2.23
CUL3YGR003W SPE3Q12074 293 aaKnown RBP1.09□□□□□ -2.23
CUL3YGR003W RPN5Q12250 445 aaKnown RBP1.09□□□□□ -2.23
CUL3YGR003W YOP1Q12402 180 aa1.09□□□□□ -2.23
CUL3YGR003W PSK1P31374 1356 aa1.09□□□□□ -2.24
CUL3YGR003W PIS1P06197 220 aaKnown RBP1.09□□□□□ -2.24
CUL3YGR003W CBP6P07253 162 aaPredicted RBP1.09□□□□□ -2.24
CUL3YGR003W HSP104P31539 908 aaKnown RBP1.09□□□□□ -2.24
CUL3YGR003W DBF4P32325 704 aa1.09□□□□□ -2.24
CUL3YGR003W VMA8P32610 256 aaKnown RBP1.09□□□□□ -2.24
CUL3YGR003W ANP1P32629 500 aa1.09□□□□□ -2.24
CUL3YGR003W SKT5P34226 696 aa1.09□□□□□ -2.24
CUL3YGR003W PFF1P38244 976 aa1.09□□□□□ -2.24
CUL3YGR003W GEP4P38812 185 aa1.09□□□□□ -2.24
CUL3YGR003W MLH1P38920 769 aa1.09□□□□□ -2.24
CUL3YGR003W ATM1P40416 690 aa1.09□□□□□ -2.24
CUL3YGR003W LCB2P40970 561 aa1.09□□□□□ -2.24
CUL3YGR003W IGD1P43598 195 aa1.09□□□□□ -2.24
CUL3YGR003W ATP22P50273 684 aaPredicted RBP1.09□□□□□ -2.24
CUL3YGR003W RSC1P53236 928 aa1.09□□□□□ -2.24
CUL3YGR003W TIR4Q12218 487 aaPredicted RBP1.09□□□□□ -2.24
CUL3YGR003W YOL085CQ99345 113 aa1.09□□□□□ -2.24
CUL3YGR003W TPK3P05986 398 aa1.08□□□□□ -2.24
CUL3YGR003W RPS14AP06367 137 aaKnown RBP1.08□□□□□ -2.24
CUL3YGR003W RNA1P11745 407 aaKnown RBP1.08□□□□□ -2.24
CUL3YGR003W PRR1P28708 518 aa1.08□□□□□ -2.24
CUL3YGR003W COX13P32799 129 aa1.08□□□□□ -2.24
CUL3YGR003W LTV1P34078 463 aa1.08□□□□□ -2.24
CUL3YGR003W MNL1P38888 796 aa1.08□□□□□ -2.24
CUL3YGR003W RPS14BP39516 138 aaKnown RBP1.08□□□□□ -2.24
CUL3YGR003W YNL208WP40159 199 aaKnown RBP1.08□□□□□ -2.24
CUL3YGR003W YIP5P53108 310 aa1.08□□□□□ -2.24
CUL3YGR003W VAC7P53950 1165 aa1.08□□□□□ -2.24
CUL3YGR003W NDL1Q06568 189 aa1.08□□□□□ -2.24
CUL3YGR003W YDL114WQ07530 308 aa1.08□□□□□ -2.24
CUL3YGR003W NSE1Q07913 336 aa1.08□□□□□ -2.24
CUL3YGR003W SMC6Q12749 1114 aa1.08□□□□□ -2.24
CUL3YGR003W SLM5P25345 492 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms