RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B SPR6Q01684 191 aa1.04□□□□□ -2.24
HTL1YCR020W-B POM152P39685 1337 aa1.04□□□□□ -2.24
HTL1YCR020W-B ATP1P07251 545 aaKnown RBP1.03□□□□□ -2.24
HTL1YCR020W-B SSC1P0CS90 654 aaKnown RBP1.03□□□□□ -2.24
HTL1YCR020W-B MRX8Q05473 314 aa1.03□□□□□ -2.24
HTL1YCR020W-B YHC1Q05900 231 aaKnown RBP1.03□□□□□ -2.24
HTL1YCR020W-B FAR10Q06001 478 aa1.03□□□□□ -2.24
HTL1YCR020W-B YLR177WQ06251 628 aa1.03□□□□□ -2.24
HTL1YCR020W-B IMH1Q06704 911 aaKnown RBP1.03□□□□□ -2.24
HTL1YCR020W-B YDL114WQ07530 308 aa1.03□□□□□ -2.24
HTL1YCR020W-B SRO7Q12038 1033 aa1.03□□□□□ -2.24
HTL1YCR020W-B EPT1P22140 391 aa1.02□□□□□ -2.25
HTL1YCR020W-B YER079WP40052 210 aaKnown RBP1.02□□□□□ -2.25
HTL1YCR020W-B YJL144WP47009 104 aa1.02□□□□□ -2.25
HTL1YCR020W-B SEH1P53011 349 aaKnown RBP1.02□□□□□ -2.25
HTL1YCR020W-B DDC1Q08949 612 aa1.02□□□□□ -2.25
HTL1YCR020W-B YOL159C-AQ3E769 90 aa1.02□□□□□ -2.25
HTL1YCR020W-B AUS1Q08409 1394 aa1.01□□□□□ -2.25
HTL1YCR020W-B ADE4P04046 510 aaKnown RBP1.01□□□□□ -2.25
HTL1YCR020W-B CKA1P15790 372 aa1.01□□□□□ -2.25
HTL1YCR020W-B CLC1P17891 233 aa1.01□□□□□ -2.25
HTL1YCR020W-B FUN26P31381 517 aa1.01□□□□□ -2.25
HTL1YCR020W-B CBF5P33322 483 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
HTL1YCR020W-B YBR241CP38142 488 aa1.01□□□□□ -2.25
HTL1YCR020W-B TRR2P38816 342 aa1.01□□□□□ -2.25
HTL1YCR020W-B YIL059CP40520 121 aa1.01□□□□□ -2.25
HTL1YCR020W-B YPS6P40583 537 aa1.01□□□□□ -2.25
HTL1YCR020W-B ZRG17P53735 605 aa1.01□□□□□ -2.25
HTL1YCR020W-B TRM112P53738 135 aaPredicted RBP1.01□□□□□ -2.25
HTL1YCR020W-B OCA2P53949 197 aa1.01□□□□□ -2.25
HTL1YCR020W-B PRP38Q00723 242 aaPredicted RBP1.01□□□□□ -2.25
HTL1YCR020W-B MSC3Q05812 728 aa1.01□□□□□ -2.25
HTL1YCR020W-B MCT1Q12283 360 aa1.01□□□□□ -2.25
HTL1YCR020W-B YOL085CQ99345 113 aa1.01□□□□□ -2.25
HTL1YCR020W-B DST1P07273 309 aa1□□□□□ -2.25
HTL1YCR020W-B ALG1P16661 449 aa1□□□□□ -2.25
HTL1YCR020W-B FUS3P16892 353 aaKnown RBP1□□□□□ -2.25
HTL1YCR020W-B URA4P20051 364 aa1□□□□□ -2.25
HTL1YCR020W-B CLB3P24870 427 aa1□□□□□ -2.25
HTL1YCR020W-B ROX1P25042 368 aa1□□□□□ -2.25
HTL1YCR020W-B UTR5P32630 166 aa1□□□□□ -2.25
HTL1YCR020W-B TOA1P32773 286 aa1□□□□□ -2.25
HTL1YCR020W-B PPQ1P32945 549 aa1□□□□□ -2.25
HTL1YCR020W-B GPI16P38875 610 aa1□□□□□ -2.25
HTL1YCR020W-B UTP9P38882 575 aaKnown RBP1□□□□□ -2.25
HTL1YCR020W-B RRT13P40042 185 aa1□□□□□ -2.25
HTL1YCR020W-B MMF1P40185 145 aaKnown RBP1□□□□□ -2.25
HTL1YCR020W-B YGR117CP53270 476 aa1□□□□□ -2.25
HTL1YCR020W-B REX2P54964 269 aaKnown RBP1□□□□□ -2.25
HTL1YCR020W-B SKO1Q02100 647 aa1□□□□□ -2.25
HTL1YCR020W-B DCS1Q06151 350 aa1□□□□□ -2.25
HTL1YCR020W-B YOR376WQ08900 122 aa1□□□□□ -2.25
HTL1YCR020W-B LDB17Q12342 491 aa1□□□□□ -2.25
HTL1YCR020W-B HMS1Q12398 434 aa1□□□□□ -2.25
HTL1YCR020W-B PCL9Q12477 304 aa1□□□□□ -2.25
HTL1YCR020W-B RPS18AP0CX55 146 aaKnown RBP0.99□□□□□ -2.25
HTL1YCR020W-B RPS18BP0CX56 146 aaPredicted RBP0.99□□□□□ -2.25
HTL1YCR020W-B MSP1P28737 362 aa0.99□□□□□ -2.25
HTL1YCR020W-B BRF1P29056 596 aa0.99□□□□□ -2.25
HTL1YCR020W-B SKG6P32900 734 aaPredicted RBP0.99□□□□□ -2.25
HTL1YCR020W-B HEL1P36113 551 aa0.99□□□□□ -2.25
HTL1YCR020W-B LSM12P38828 187 aaKnown RBP0.99□□□□□ -2.25
HTL1YCR020W-B HEM14P40012 539 aa0.99□□□□□ -2.25
HTL1YCR020W-B TRF5P48561 642 aaKnown RBP0.99□□□□□ -2.25
HTL1YCR020W-B KAP120Q02932 1032 aa0.99□□□□□ -2.25
HTL1YCR020W-B INP2Q03824 705 aa0.99□□□□□ -2.25
HTL1YCR020W-B ARX1Q03862 593 aaKnown RBP0.99□□□□□ -2.25
HTL1YCR020W-B YDR131CQ03899 556 aa0.99□□□□□ -2.25
HTL1YCR020W-B YMR130WQ04223 302 aa0.99□□□□□ -2.25
HTL1YCR020W-B COX3P00420 269 aa0.98□□□□□ -2.25
HTL1YCR020W-B SCH9P11792 824 aaKnown RBP0.98□□□□□ -2.25
HTL1YCR020W-B IMP2'P32351 346 aa0.98□□□□□ -2.25
HTL1YCR020W-B SPO23P33757 523 aa0.98□□□□□ -2.25
HTL1YCR020W-B SRB2P34162 210 aa0.98□□□□□ -2.25
HTL1YCR020W-B GPX2P38143 162 aa0.98□□□□□ -2.25
HTL1YCR020W-B PIB2P53191 635 aa0.98□□□□□ -2.25
HTL1YCR020W-B RNH201P53942 307 aa0.98□□□□□ -2.25
HTL1YCR020W-B YMR010WQ03687 405 aa0.98□□□□□ -2.25
HTL1YCR020W-B ASA1Q06822 443 aa0.98□□□□□ -2.25
HTL1YCR020W-B FLO11P08640 1367 aa0.97□□□□□ -2.25
HTL1YCR020W-B DBP7P36120 742 aaKnown RBP0.97□□□□□ -2.25
HTL1YCR020W-B FRM2P37261 193 aa0.97□□□□□ -2.25
HTL1YCR020W-B GEP4P38812 185 aa0.97□□□□□ -2.25
HTL1YCR020W-B YPT35P38815 214 aaKnown RBP0.97□□□□□ -2.25
HTL1YCR020W-B COS4P43542 379 aa0.97□□□□□ -2.25
HTL1YCR020W-B KEG1P43614 200 aa0.97□□□□□ -2.25
HTL1YCR020W-B VAC7P53950 1165 aa0.97□□□□□ -2.25
HTL1YCR020W-B RMI1Q02685 241 aa0.97□□□□□ -2.25
HTL1YCR020W-B MRX11Q03079 207 aa0.97□□□□□ -2.25
HTL1YCR020W-B DON1Q05610 365 aa0.97□□□□□ -2.25
HTL1YCR020W-B RTN2Q12443 393 aa0.97□□□□□ -2.25
HTL1YCR020W-B YAL067W-AQ8TGK6 75 aa0.97□□□□□ -2.25
HTL1YCR020W-B PAB1P04147 577 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26 RIP-Chip
HTL1YCR020W-B CDC21P06785 304 aa0.96□□□□□ -2.26
HTL1YCR020W-B MRP7P12687 371 aa0.96□□□□□ -2.26
HTL1YCR020W-B NIP1P32497 812 aaKnown RBP0.96□□□□□ -2.26
HTL1YCR020W-B SPS19P32573 292 aaKnown RBP0.96□□□□□ -2.26
HTL1YCR020W-B TIR2P33890 251 aa0.96□□□□□ -2.26
HTL1YCR020W-B SKT5P34226 696 aa0.96□□□□□ -2.26
HTL1YCR020W-B CAK1P43568 368 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms