RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W RSN1Q03516 953 aa3.24□□□□□ -1.89
NUP60YAR002W DLT1Q04216 342 aa3.24□□□□□ -1.89
NUP60YAR002W RPC11Q04307 110 aaPredicted RBP3.24□□□□□ -1.89
NUP60YAR002W ENT2Q05785 613 aa3.24□□□□□ -1.89
NUP60YAR002W DBP9Q06218 594 aaKnown RBP3.24□□□□□ -1.89
NUP60YAR002W SGO1Q08490 590 aa3.24□□□□□ -1.89
NUP60YAR002W ATG29Q12092 213 aa3.24□□□□□ -1.89
NUP60YAR002W NMD4Q12129 218 aa3.24□□□□□ -1.89
NUP60YAR002W YDL199CQ12407 687 aa3.24□□□□□ -1.89
NUP60YAR002W BRR1Q99177 341 aaPredicted RBP3.24□□□□□ -1.89
NUP60YAR002W YPR096CO13587 100 aa3.23□□□□□ -1.89
NUP60YAR002W LEU4P06208 619 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W FPR1P20081 114 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W GRR1P24814 1151 aa3.23□□□□□ -1.89
NUP60YAR002W SLM5P25345 492 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W TRX3P25372 127 aa3.23□□□□□ -1.89
NUP60YAR002W PPZ1P26570 692 aa3.23□□□□□ -1.89
NUP60YAR002W VMA6P32366 345 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W MRPL6P32904 214 aa3.23□□□□□ -1.89
NUP60YAR002W DEF1P35732 738 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W ARA1P38115 344 aa3.23□□□□□ -1.89
NUP60YAR002W YPT35P38815 214 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W EGD2P38879 174 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W YEL020CP39994 560 aa3.23□□□□□ -1.89
NUP60YAR002W GIM4P40005 111 aaKnown RBP3.23□□□□□ -1.89
NUP60YAR002W IES5P40060 125 aa3.23□□□□□ -1.89
NUP60YAR002W AVT6P40074 448 aa3.23□□□□□ -1.89
NUP60YAR002W OSW5P40219 148 aa3.23□□□□□ -1.89
NUP60YAR002W MPM1P40364 252 aa3.23□□□□□ -1.89
NUP60YAR002W GPI8P49018 411 aa3.23□□□□□ -1.89
NUP60YAR002W MUP1P50276 574 aa3.23□□□□□ -1.89
NUP60YAR002W SHE4P51534 789 aa3.23□□□□□ -1.89
NUP60YAR002W NBP35P52920 328 aa3.23□□□□□ -1.89
NUP60YAR002W IGO1P53897 168 aa3.23□□□□□ -1.89
NUP60YAR002W ARG5,6Q01217 863 aa3.23□□□□□ -1.89
NUP60YAR002W REC102Q02721 264 aa3.23□□□□□ -1.89
NUP60YAR002W SWP1Q02795 286 aa3.23□□□□□ -1.89
NUP60YAR002W RRN5Q02983 363 aa3.23□□□□□ -1.89
NUP60YAR002W TLG1Q03322 224 aa3.23□□□□□ -1.89
NUP60YAR002W YHM2Q04013 314 aa3.23□□□□□ -1.89
NUP60YAR002W GAD1Q04792 585 aa3.23□□□□□ -1.89
NUP60YAR002W FMP42Q04991 504 aa3.23□□□□□ -1.89
NUP60YAR002W ARR1Q06596 294 aa3.23□□□□□ -1.89
NUP60YAR002W MCM21Q06675 368 aa3.23□□□□□ -1.89
NUP60YAR002W TRM8Q12009 286 aa3.23□□□□□ -1.89
NUP60YAR002W MSH5Q12175 901 aa3.23□□□□□ -1.89
NUP60YAR002W RIB3Q99258 208 aa3.23□□□□□ -1.89
NUP60YAR002W TY2A-LR1P0C2J4 438 aa3.22□□□□□ -1.89
NUP60YAR002W YKR104WP0CE69 306 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-FP0CX61 438 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-GR2P0CX62 438 aa3.22□□□□□ -1.89
NUP60YAR002W CBS2P14905 389 aa3.22□□□□□ -1.89
NUP60YAR002W CLB2P24869 491 aa3.22□□□□□ -1.89
NUP60YAR002W ERG4P25340 473 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-CP25383 438 aa3.22□□□□□ -1.89
NUP60YAR002W NUP2P32499 720 aa3.22□□□□□ -1.89
NUP60YAR002W PRP21P32524 280 aaPredicted RBP3.22□□□□□ -1.89
NUP60YAR002W MGM101P32787 269 aaKnown RBP3.22□□□□□ -1.89
NUP60YAR002W CAT2P32796 670 aaKnown RBP3.22□□□□□ -1.89
NUP60YAR002W UTP11P34247 250 aaPredicted RBP3.22□□□□□ -1.89
NUP60YAR002W CBP4P37267 147 aa3.22□□□□□ -1.89
NUP60YAR002W TAE1P38340 232 aa3.22□□□□□ -1.89
NUP60YAR002W AXL2P38928 823 aa3.22□□□□□ -1.89
NUP60YAR002W GGC1P38988 300 aa3.22□□□□□ -1.89
NUP60YAR002W CCT6P39079 546 aa3.22□□□□□ -1.89
NUP60YAR002W LAS21P40367 830 aa3.22□□□□□ -1.89
NUP60YAR002W YFR020WP43600 232 aa3.22□□□□□ -1.89
NUP60YAR002W PMT4P46971 762 aa3.22□□□□□ -1.89
NUP60YAR002W YJL043WP47053 257 aa3.22□□□□□ -1.89
NUP60YAR002W BIR1P47134 954 aa3.22□□□□□ -1.89
NUP60YAR002W BUL1P48524 976 aa3.22□□□□□ -1.89
NUP60YAR002W COS12P53053 380 aa3.22□□□□□ -1.89
NUP60YAR002W SLD3P53135 668 aa3.22□□□□□ -1.89
NUP60YAR002W ESF2P53743 316 aaKnown RBP3.22□□□□□ -1.89
NUP60YAR002W ASI1P54074 624 aa3.22□□□□□ -1.89
NUP60YAR002W SRL4Q03085 281 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-DR2Q03483 438 aa3.22□□□□□ -1.89
NUP60YAR002W ARG7Q04728 441 aa3.22□□□□□ -1.89
NUP60YAR002W SWA2Q06677 668 aa3.22□□□□□ -1.89
NUP60YAR002W ATG10Q07879 167 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-BQ12260 438 aa3.22□□□□□ -1.89
NUP60YAR002W HER1Q12276 1246 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-OR2Q12293 438 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-DR1Q12392 438 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-OR1Q12439 438 aa3.22□□□□□ -1.89
NUP60YAR002W MHF1Q3E835 90 aa3.22□□□□□ -1.89
NUP60YAR002W MED11Q99278 115 aa3.22□□□□□ -1.89
NUP60YAR002W TY2A-DR3Q99303 438 aa3.22□□□□□ -1.89
NUP60YAR002W RPS21AP0C0V8 87 aaKnown RBP3.22□□□□□ -1.89
NUP60YAR002W LAT1P12695 482 aaKnown RBP3.22□□□□□ -1.89
NUP60YAR002W RHB1P25378 209 aa3.22□□□□□ -1.89
NUP60YAR002W IDH2P28241 369 aaKnown RBP3.22□□□□□ -1.89
NUP60YAR002W NPL6P32832 435 aa3.22□□□□□ -1.89
NUP60YAR002W HCS1P34243 683 aa3.22□□□□□ -1.89
NUP60YAR002W NTR2P36118 322 aaPredicted RBP3.22□□□□□ -1.89
NUP60YAR002W STP2P38704 541 aa3.22□□□□□ -1.89
NUP60YAR002W KRE29P40026 464 aa3.22□□□□□ -1.89
NUP60YAR002W GID8P40208 455 aa3.22□□□□□ -1.89
NUP60YAR002W APQ12P40532 138 aa3.22□□□□□ -1.89
NUP60YAR002W IRC5P43610 853 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms