RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ATP6V0A1Q93050 837 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 MTMR8Q96EF0 704 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 OSBPL7Q9BZF2 842 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 OSBPL3Q9H4L5 887 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 BCAS3Q9H6U6 928 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 TFIP11Q9UBB9 837 aaKnown RBP9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 INSL6Q9Y581 213 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 PCDHA1Q9Y5I3 950 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 COL4A6Q14031 1691 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 EMSYQ7Z589 1322 aa9.03□□□□□ -0.96
SMCHD1-210ENST00000583800 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 HIP1O00291 1037 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 TREHO43280 583 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 PPFIA4O75335 1185 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 IGHDP01880 384 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 CCND2P30279 289 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 HTRA4P83105 476 aaPredicted RBP9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 NUCB1Q02818 461 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 LEXMQ3ZCV2 418 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 PLEKHG4Q58EX7 1191 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 KCNV1Q6PIU1 500 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 PIGSQ96S52 555 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 CNNM2Q9H8M5 875 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 MLXIPQ9HAP2 919 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 CTNNA3Q9UI47 895 aa9.02□□□□□ -0.97
SMCHD1-210ENST00000583800 MUC6Q6W4X9 2439 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 H3BRB1 525 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 CYTH3O43739 400 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 UPP2O95045 317 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 AVPP01185 164 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 POLR2MP0CAP2 368 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 HOXC8P31273 242 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 SEMA3FQ13275 785 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 GRM4Q14833 912 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 EPC2Q52LR7 807 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 TRIM50Q86XT4 487 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 FAM178BQ8IXR5 827 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 GJD3Q8N144 294 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 YME1L1Q96TA2 773 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 RWDD1Q9H446 243 aaPredicted RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 TUT1Q9H6E5 874 aaKnown RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 GMPR2Q9P2T1 348 aaKnown RBP9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 TELO2Q9Y4R8 837 aa9.01□□□□□ -0.97
SMCHD1-210ENST00000583800 PI4K2BG5E9Z4 385 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 H3BQ06 376 aaPredicted RBP9□□□□□ -0.97
SMCHD1-210ENST00000583800 TGFB3P10600 412 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 MRPS9P82933 396 aaKnown RBP9□□□□□ -0.97
SMCHD1-210ENST00000583800 SP4Q02446 784 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
SMCHD1-210ENST00000583800 GPM6BQ13491 265 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 PTPROQ16827 1216 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 TIGD5Q53EQ6 642 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 TCEAL5Q5H9L2 206 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 METTL7BQ6UX53 244 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 CYFIP1Q7L576 1253 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 SCUBE3Q8IX30 993 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 SAMD3Q8N6K7 520 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 PIBF1Q8WXW3 757 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 SEPT8Q92599 483 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 TOP1MTQ969P6 601 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 MRPL38Q96DV4 380 aaKnown RBP9□□□□□ -0.97
SMCHD1-210ENST00000583800 GPR20Q99678 358 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 RIOX1Q9H6W3 641 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 SETD4Q9NVD3 440 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 TOR4AQ9NXH8 423 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 RTEL1Q9NZ71 1219 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 SUPT16HQ9Y5B9 1047 aaKnown RBP9□□□□□ -0.97
SMCHD1-210ENST00000583800 TTC3P53804 2025 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
SMCHD1-210ENST00000583800 H3BNC9 293 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 IFIT3O14879 490 aaKnown RBP8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 CAND2O75155 1236 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 CYP21A2P08686 494 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 ICAM3P32942 547 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 ARHGAP4P98171 946 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 TRDNQ13061 729 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 NEDD9Q14511 834 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 GNPTABQ3T906 1256 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 UTP14CQ5TAP6 766 aaKnown RBP8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 EP400NLQ6ZTU2 488 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 TMEM192Q8IY95 271 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 RDH13Q8NBN7 331 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 NEK9Q8TD19 979 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 LMBR1Q8WVP7 490 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 SAMD11Q96NU1 681 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 INPP4AQ96PE3 977 aaPredicted RBP8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 IFIH1Q9BYX4 1025 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms