RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W ACL4Q03771 387 aa1.59□□□□□ -2.16
CTF4YPR135W VPS20Q04272 221 aa1.59□□□□□ -2.16
CTF4YPR135W HRD3Q05787 833 aa1.59□□□□□ -2.16
CTF4YPR135W LYS21Q12122 440 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W AVL9Q12500 764 aa1.59□□□□□ -2.16
CTF4YPR135W YER175W-AQ8TGU4 54 aa1.59□□□□□ -2.16
CTF4YPR135W YBR085C-AO43137 85 aa1.58□□□□□ -2.16
CTF4YPR135W BI2P03873 423 aa1.58□□□□□ -2.16
CTF4YPR135W CPR3P25719 182 aa1.58□□□□□ -2.16
CTF4YPR135W KRE6P32486 720 aa1.58□□□□□ -2.16
CTF4YPR135W TUL1P36096 758 aa1.58□□□□□ -2.16
CTF4YPR135W YPT10P38146 199 aa1.58□□□□□ -2.16
CTF4YPR135W NTC20P38302 140 aaPredicted RBP1.58□□□□□ -2.16
CTF4YPR135W SIP3P38717 1229 aa1.58□□□□□ -2.16
CTF4YPR135W CCT4P39078 528 aaKnown RBP1.58□□□□□ -2.16
CTF4YPR135W UTP6Q02354 440 aaKnown RBP1.58□□□□□ -2.16
CTF4YPR135W MSC1Q03104 513 aa1.58□□□□□ -2.16
CTF4YPR135W YMR160WQ03823 816 aa1.58□□□□□ -2.16
CTF4YPR135W ATG10Q07879 167 aa1.58□□□□□ -2.16
CTF4YPR135W YLR030WQ07967 263 aa1.58□□□□□ -2.16
CTF4YPR135W THR4P16120 514 aaKnown RBP1.58□□□□□ -2.16
CTF4YPR135W PDA1P16387 420 aaKnown RBP1.58□□□□□ -2.16
CTF4YPR135W CNE1P27825 502 aa1.58□□□□□ -2.16
CTF4YPR135W SSE1P32589 693 aaKnown RBP1.58□□□□□ -2.16
CTF4YPR135W NIP100P33420 868 aa1.58□□□□□ -2.16
CTF4YPR135W SDH8P38345 138 aa1.58□□□□□ -2.16
CTF4YPR135W RFC3P38629 340 aa1.58□□□□□ -2.16
CTF4YPR135W OTU2P38747 307 aaKnown RBP1.58□□□□□ -2.16
CTF4YPR135W FAD1P38913 306 aa1.58□□□□□ -2.16
CTF4YPR135W PHB1P40961 287 aa1.58□□□□□ -2.16
CTF4YPR135W GCD14P46959 383 aaPredicted RBP1.58□□□□□ -2.16
CTF4YPR135W COG7P53195 279 aa1.58□□□□□ -2.16
CTF4YPR135W BUD17P53727 317 aa1.58□□□□□ -2.16
CTF4YPR135W PRM1P53835 661 aa1.58□□□□□ -2.16
CTF4YPR135W IPI3P53877 555 aa1.58□□□□□ -2.16
CTF4YPR135W BOP3P53958 396 aa1.58□□□□□ -2.16
CTF4YPR135W PIR1Q03178 341 aa1.58□□□□□ -2.16
CTF4YPR135W SMA2Q04658 369 aa1.58□□□□□ -2.16
CTF4YPR135W STE23Q06010 1027 aa1.58□□□□□ -2.16
CTF4YPR135W CRN1Q06440 651 aa1.58□□□□□ -2.16
CTF4YPR135W YPR172WQ06608 200 aa1.58□□□□□ -2.16
CTF4YPR135W SIL1Q08199 421 aa1.58□□□□□ -2.16
CTF4YPR135W GSH2Q08220 491 aa1.58□□□□□ -2.16
CTF4YPR135W VPS54Q12071 889 aa1.58□□□□□ -2.16
CTF4YPR135W YBR255C-AQ3E776 120 aa1.58□□□□□ -2.16
CTF4YPR135W STE3P06783 470 aa1.57□□□□□ -2.16
CTF4YPR135W YPK1P12688 680 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W TAL1P15019 335 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W SCL1P21243 252 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W DAL81P21657 970 aa1.57□□□□□ -2.16
CTF4YPR135W UBA1P22515 1024 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W YJU2P28320 278 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W CDC5P32562 705 aa1.57□□□□□ -2.16
CTF4YPR135W SSE2P32590 693 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W NTR2P36118 322 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W ARA1P38115 344 aa1.57□□□□□ -2.16
CTF4YPR135W APD1P38281 316 aa1.57□□□□□ -2.16
CTF4YPR135W BFR1P38934 470 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
CTF4YPR135W YAT2P40017 923 aa1.57□□□□□ -2.16
CTF4YPR135W RSM25P40496 264 aa1.57□□□□□ -2.16
CTF4YPR135W YFR020WP43600 232 aa1.57□□□□□ -2.16
CTF4YPR135W YJL132WP47014 750 aa1.57□□□□□ -2.16
CTF4YPR135W YJR054WP47114 497 aa1.57□□□□□ -2.16
CTF4YPR135W MSY1P48527 492 aa1.57□□□□□ -2.16
CTF4YPR135W NBP35P52920 328 aa1.57□□□□□ -2.16
CTF4YPR135W EFM6P53970 246 aa1.57□□□□□ -2.16
CTF4YPR135W INP2Q03824 705 aa1.57□□□□□ -2.16
CTF4YPR135W PPM1Q04081 328 aa1.57□□□□□ -2.16
CTF4YPR135W YMR111CQ04461 462 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W ATG23Q06671 453 aa1.57□□□□□ -2.16
CTF4YPR135W RAX1Q08760 435 aa1.57□□□□□ -2.16
CTF4YPR135W DDC1Q08949 612 aa1.57□□□□□ -2.16
CTF4YPR135W YLR046CQ12253 270 aa1.57□□□□□ -2.16
CTF4YPR135W YDR262WQ12331 272 aa1.57□□□□□ -2.16
CTF4YPR135W YOR012WQ12351 137 aa1.57□□□□□ -2.16
CTF4YPR135W YDL007C-AQ2V2Q0 85 aa1.57□□□□□ -2.16
CTF4YPR135W COX1P00401 534 aa1.57□□□□□ -2.16
CTF4YPR135W AAC1P04710 309 aa1.57□□□□□ -2.16
CTF4YPR135W SCH9P11792 824 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W SPO7P18410 259 aa1.57□□□□□ -2.16
CTF4YPR135W URA4P20051 364 aa1.57□□□□□ -2.16
CTF4YPR135W RPC34P32910 317 aa1.57□□□□□ -2.16
CTF4YPR135W YBL055CP34220 418 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W BMH2P34730 273 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W YUH1P35127 236 aa1.57□□□□□ -2.16
CTF4YPR135W RSM22P36056 628 aa1.57□□□□□ -2.16
CTF4YPR135W MSG5P38590 489 aa1.57□□□□□ -2.16
CTF4YPR135W IMD2P38697 523 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W YJR079WP47126 109 aa1.57□□□□□ -2.16
CTF4YPR135W YGR149WP48236 432 aa1.57□□□□□ -2.16
CTF4YPR135W TOM22P49334 152 aa1.57□□□□□ -2.16
CTF4YPR135W MZM1Q03429 123 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W FIN1Q03898 291 aa1.57□□□□□ -2.16
CTF4YPR135W MRPL1Q04599 285 aa1.57□□□□□ -2.16
CTF4YPR135W VTA1Q06263 330 aa1.57□□□□□ -2.16
CTF4YPR135W YDL242WQ07746 117 aa1.57□□□□□ -2.16
CTF4YPR135W YLR012CQ07927 99 aa1.57□□□□□ -2.16
CTF4YPR135W FRE3Q08905 711 aa1.57□□□□□ -2.16
CTF4YPR135W FMP40Q08968 688 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W YDL211CQ12121 372 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms