RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YDR061WQ12298 539 aa2.12□□□□□ -2.07
BRO1YPL084W RNH203Q12338 110 aa2.12□□□□□ -2.07
BRO1YPL084W NCA2Q12374 616 aa2.12□□□□□ -2.07
BRO1YPL084W TRP1P00912 224 aa2.12□□□□□ -2.07
BRO1YPL084W SPT15P13393 240 aaKnown RBP2.12□□□□□ -2.07
BRO1YPL084W CBS2P14905 389 aa2.12□□□□□ -2.07
BRO1YPL084W OPI1P21957 404 aa2.12□□□□□ -2.07
BRO1YPL084W NAM9P27929 486 aa2.12□□□□□ -2.07
BRO1YPL084W CHK1P38147 527 aa2.12□□□□□ -2.07
BRO1YPL084W YSW1P38280 609 aa2.12□□□□□ -2.07
BRO1YPL084W PTH1P38876 190 aaKnown RBP2.12□□□□□ -2.07
BRO1YPL084W PAC11P40960 533 aa2.12□□□□□ -2.07
BRO1YPL084W MTM1P53320 366 aa2.12□□□□□ -2.07
BRO1YPL084W ERV2Q12284 196 aa2.12□□□□□ -2.07
BRO1YPL084W SKS1Q12505 502 aa2.12□□□□□ -2.07
BRO1YPL084W HHF1P02309 103 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W CYC3P06182 269 aa2.11□□□□□ -2.07
BRO1YPL084W ATP1P07251 545 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W SLM5P25345 492 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W MNS1P32906 549 aa2.11□□□□□ -2.07
BRO1YPL084W PAD1P33751 242 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
BRO1YPL084W RRP1P35178 278 aaPredicted RBP2.11□□□□□ -2.07
BRO1YPL084W MRPL4P36517 319 aa2.11□□□□□ -2.07
BRO1YPL084W KAP104P38217 918 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W SPP381P38282 291 aaPredicted RBP2.11□□□□□ -2.07
BRO1YPL084W CWC25P53854 179 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W RAX1Q08760 435 aa2.11□□□□□ -2.07
BRO1YPL084W SMF3Q12078 473 aaPredicted RBP2.11□□□□□ -2.07
BRO1YPL084W NFI1Q12216 726 aa2.11□□□□□ -2.07
BRO1YPL084W RPS8AP0CX39 200 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W RPS8BP0CX40 200 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W RPL12AP0CX53 165 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W RPL12BP0CX54 165 aa2.11□□□□□ -2.07
BRO1YPL084W COX13P32799 129 aa2.11□□□□□ -2.07
BRO1YPL084W LAS1P36146 502 aaPredicted RBP2.11□□□□□ -2.07
BRO1YPL084W DAD2P36162 133 aa2.11□□□□□ -2.07
BRO1YPL084W AVT5P38176 459 aa2.11□□□□□ -2.07
BRO1YPL084W RFS1P38234 210 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W ASN2P49090 572 aaKnown RBP2.11□□□□□ -2.07
BRO1YPL084W NUP116Q02630 1113 aa2.11□□□□□ -2.07
BRO1YPL084W HER2Q03557 464 aa2.11□□□□□ -2.07
BRO1YPL084W CAP2P13517 287 aa2.1□□□□□ -2.07
BRO1YPL084W DAP2P18962 818 aa2.1□□□□□ -2.07
BRO1YPL084W EXG1P23776 448 aaKnown RBP2.1□□□□□ -2.07
BRO1YPL084W ATM1P40416 690 aa2.1□□□□□ -2.07
BRO1YPL084W PMT5P52867 743 aa2.1□□□□□ -2.07
BRO1YPL084W SPR6Q01684 191 aa2.1□□□□□ -2.07
BRO1YPL084W URC2Q04411 772 aa2.1□□□□□ -2.07
BRO1YPL084W IPK1Q06667 281 aa2.1□□□□□ -2.07
BRO1YPL084W TLG2Q08144 397 aa2.1□□□□□ -2.07
BRO1YPL084W MSP1P28737 362 aa2.1□□□□□ -2.07
BRO1YPL084W YHR177WP38867 453 aa2.1□□□□□ -2.07
BRO1YPL084W YPI1P43587 155 aa2.1□□□□□ -2.07
BRO1YPL084W STE24P47154 453 aa2.1□□□□□ -2.07
BRO1YPL084W RTT102P53330 157 aa2.1□□□□□ -2.07
BRO1YPL084W SCW10Q04951 389 aa2.1□□□□□ -2.07
BRO1YPL084W MRPL35Q06678 367 aa2.1□□□□□ -2.07
BRO1YPL084W NDE2Q07500 545 aa2.1□□□□□ -2.07
BRO1YPL084W TMS1Q12116 473 aa2.1□□□□□ -2.07
BRO1YPL084W TFB5Q3E7C1 72 aaPredicted RBP2.1□□□□□ -2.07
BRO1YPL084W SPT7P35177 1332 aa2.09□□□□□ -2.07
BRO1YPL084W ARF1P11076 181 aaKnown RBP2.09□□□□□ -2.07
BRO1YPL084W DOA1P36037 715 aa2.09□□□□□ -2.07
BRO1YPL084W SBE22P38814 852 aa2.09□□□□□ -2.07
BRO1YPL084W PAN6P40459 309 aa2.09□□□□□ -2.07
BRO1YPL084W SPG5P42933 373 aa2.09□□□□□ -2.07
BRO1YPL084W TOS2P50078 622 aa2.09□□□□□ -2.07
BRO1YPL084W YGR117CP53270 476 aa2.09□□□□□ -2.07
BRO1YPL084W ASA1Q06822 443 aa2.09□□□□□ -2.07
BRO1YPL084W CUE5Q08412 411 aaKnown RBP2.09□□□□□ -2.07
BRO1YPL084W CEX1Q12453 761 aa2.09□□□□□ -2.07
BRO1YPL084W SRN2Q99176 213 aa2.09□□□□□ -2.07
BRO1YPL084W TPK3P05986 398 aa2.09□□□□□ -2.08
BRO1YPL084W PHO84P25297 587 aaKnown RBP2.09□□□□□ -2.08
BRO1YPL084W DAL2P25335 343 aa2.09□□□□□ -2.08
BRO1YPL084W PHA2P32452 334 aa2.09□□□□□ -2.08
BRO1YPL084W SKT5P34226 696 aa2.09□□□□□ -2.08
BRO1YPL084W ADH5P38113 351 aaKnown RBP2.09□□□□□ -2.08
BRO1YPL084W MSG5P38590 489 aa2.09□□□□□ -2.08
BRO1YPL084W COX14P39103 70 aa2.09□□□□□ -2.08
BRO1YPL084W YIL029CP40538 142 aa2.09□□□□□ -2.08
BRO1YPL084W HRI1Q05905 244 aaKnown RBP2.09□□□□□ -2.08
BRO1YPL084W YFH1Q07540 174 aa2.09□□□□□ -2.08
BRO1YPL084W LDS2Q08218 356 aa2.09□□□□□ -2.08
BRO1YPL084W SSC1P0CS90 654 aaKnown RBP2.08□□□□□ -2.08
BRO1YPL084W SCH9P11792 824 aaKnown RBP2.08□□□□□ -2.08
BRO1YPL084W PET123P17558 318 aa2.08□□□□□ -2.08
BRO1YPL084W POT1P27796 417 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
BRO1YPL084W FAA1P30624 700 aaKnown RBP2.08□□□□□ -2.08
BRO1YPL084W KAR9P32526 644 aa2.08□□□□□ -2.08
BRO1YPL084W YEF1P32622 495 aa2.08□□□□□ -2.08
BRO1YPL084W GDT1P38301 280 aaPredicted RBP2.08□□□□□ -2.08
BRO1YPL084W REE1P40893 198 aa2.08□□□□□ -2.08
BRO1YPL084W MRM2P53123 320 aa2.08□□□□□ -2.08
BRO1YPL084W YGR016WP53209 190 aa2.08□□□□□ -2.08
BRO1YPL084W PRP3Q03338 469 aaPredicted RBP2.08□□□□□ -2.08
BRO1YPL084W YDR286CQ05530 114 aa2.08□□□□□ -2.08
BRO1YPL084W YOP1Q12402 180 aa2.08□□□□□ -2.08
BRO1YPL084W POM152P39685 1337 aa2.08□□□□□ -2.08
BRO1YPL084W ARO2P28777 376 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms