RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	RPS8B	P0CX40	200 aa	Known RBP	3.76	□□□□□ -1.81
EBP2	YKL172W	CLN3	P13365	580 aa		3.76	□□□□□ -1.81
EBP2	YKL172W	MMF1	P40185	145 aa	Known RBP	3.76	□□□□□ -1.81
EBP2	YKL172W	PRE5	P40302	234 aa	Known RBP	3.76	□□□□□ -1.81
EBP2	YKL172W	CCE1	Q03702	353 aa		3.76	□□□□□ -1.81
EBP2	YKL172W	NCA2	Q12374	616 aa		3.76	□□□□□ -1.81
EBP2	YKL172W	NAM2	P11325	894 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	ALG1	P16661	449 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	COX13	P32799	129 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	LCB2	P40970	561 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	TOS3	P43637	560 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	NUP116	Q02630	1113 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	YDR541C	Q03049	344 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	YMR027W	Q04371	470 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	NDL1	Q06568	189 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	MDM36	Q06820	579 aa		3.75	□□□□□ -1.81
EBP2	YKL172W	RPN5	Q12250	445 aa	Known RBP	3.75	□□□□□ -1.81
EBP2	YKL172W	ADH2	P00331	348 aa	Known RBP	3.74	□□□□□ -1.81
EBP2	YKL172W	ATP1	P07251	545 aa	Known RBP	3.74	□□□□□ -1.81
EBP2	YKL172W	PHO91	P27514	894 aa		3.74	□□□□□ -1.81
EBP2	YKL172W	SKN1	P33336	771 aa		3.74	□□□□□ -1.81
EBP2	YKL172W	SWD3	P38123	315 aa		3.74	□□□□□ -1.81
EBP2	YKL172W	PRP3	Q03338	469 aa	Predicted RBP	3.74	□□□□□ -1.81
EBP2	YKL172W	LOT6	Q07923	191 aa		3.74	□□□□□ -1.81
EBP2	YKL172W	WTM1	Q12363	437 aa	Known RBP	3.74	□□□□□ -1.81
EBP2	YKL172W	PHA2	P32452	334 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
EBP2	YKL172W	SKT5	P34226	696 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	MRPL4	P36517	319 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	SBE22	P38814	852 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	GDI1	P39958	451 aa	Known RBP	3.73	□□□□□ -1.81
EBP2	YKL172W	SIM1	P40472	476 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	PAC11	P40960	533 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	YGL039W	P53183	348 aa	Known RBP	3.73	□□□□□ -1.81
EBP2	YKL172W	JID1	Q12350	301 aa		3.73	□□□□□ -1.81
EBP2	YKL172W	PAR32	Q12515	295 aa	Known RBP	3.73	□□□□□ -1.81
EBP2	YKL172W	RPL1A	P0CX43	217 aa	Known RBP	3.72	□□□□□ -1.81
EBP2	YKL172W	RPL1B	P0CX44	217 aa	Known RBP	3.72	□□□□□ -1.81
EBP2	YKL172W	MNE1	P24720	663 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	SLM5	P25345	492 aa	Known RBP	3.72	□□□□□ -1.81
EBP2	YKL172W	SPR1	P32603	445 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	YEF1	P32622	495 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	MDL1	P33310	695 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	GPI16	P38875	610 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	MAM33	P40513	266 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	CHS6	P40955	746 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	MRM2	P53123	320 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	RRP46	P53256	223 aa	Predicted RBP	3.72	□□□□□ -1.81
EBP2	YKL172W	SHY1	P53266	389 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	PRM6	Q04705	352 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	YGK3	Q12222	375 aa	Predicted RBP	3.72	□□□□□ -1.81
EBP2	YKL172W	RBD2	Q12270	262 aa		3.72	□□□□□ -1.81
EBP2	YKL172W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.71	□□□□□ -1.82	not detected
EBP2	YKL172W	CAP2	P13517	287 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	RPB5	P20434	215 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	EXG1	P23776	448 aa	Known RBP	3.71	□□□□□ -1.82
EBP2	YKL172W	QDR3	P38227	689 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	JEM1	P40358	645 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	ROG1	P53118	685 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	YGR117C	P53270	476 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	MHR1	Q06630	226 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	CMS1	Q07897	291 aa	Known RBP	3.71	□□□□□ -1.82
EBP2	YKL172W	SMC5	Q08204	1093 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	EAF3	Q12432	401 aa		3.71	□□□□□ -1.82
EBP2	YKL172W	POM152	P39685	1337 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	PIS1	P06197	220 aa	Known RBP	3.7	□□□□□ -1.82
EBP2	YKL172W	PRR1	P28708	518 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	STP2	P38704	541 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	YJR085C	P47131	105 aa	Known RBP	3.7	□□□□□ -1.82
EBP2	YKL172W	ADA2	Q02336	434 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	YMR102C	Q03177	834 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	RTN1	Q04947	295 aa	Known RBP	3.7	□□□□□ -1.82
EBP2	YKL172W	RIF2	Q06208	395 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	AAD15	Q08361	143 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	CUE5	Q08412	411 aa	Known RBP	3.7	□□□□□ -1.82
EBP2	YKL172W	SRN2	Q99176	213 aa		3.7	□□□□□ -1.82
EBP2	YKL172W	HSP82	P02829	709 aa	Known RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	RPL12A	P0CX53	165 aa	Known RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	RPL12B	P0CX54	165 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	ARF1	P11076	181 aa	Known RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	MSI1	P13712	422 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	CSE2	P33308	149 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	DOA1	P36037	715 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	GDT1	P38301	280 aa	Predicted RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	ATM1	P40416	690 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	SEC28	P40509	296 aa	Known RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	EFM4	P40516	257 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	HAC1	P41546	238 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	AIM24	P47127	394 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	STE24	P47154	453 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	SPR6	Q01684	191 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	RCF1	Q03713	159 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	TMC1	Q08422	150 aa	Predicted RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	PLP2	Q12017	286 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	RNH203	Q12338	110 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	IZH2	Q12442	317 aa		3.69	□□□□□ -1.82
EBP2	YKL172W	HTZ1	Q12692	134 aa	Known RBP	3.69	□□□□□ -1.82
EBP2	YKL172W	PUP2	P32379	260 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	YSC83	P32792	385 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	RAD5	P32849	1169 aa	Predicted RBP	3.68	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms