RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B FCF1Q05498 189 aaPredicted RBP-0.66□□□□□ -2.51
YHL009W-BYHL009W-B IMA2Q08295 589 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B YIG1Q08956 461 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B YDR056CQ12025 205 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B YDL109CQ12103 647 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B APC2Q12440 853 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B AVL9Q12500 764 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B RKM4Q12504 494 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B YAL067W-AQ8TGK6 75 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B RAD9P14737 1309 aa-0.66□□□□□ -2.51
YHL009W-BYHL009W-B BUD4P47136 1447 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SPT7P35177 1332 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B LPD1P09624 499 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SST2P11972 698 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B CBF1P17106 351 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SPS22P25380 463 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B CYS4P32582 507 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B RAD24P32641 659 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B CSE4P36012 229 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B MRPL37P36532 105 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B OSH3P38713 996 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B APE4P38821 490 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SPC72P39723 622 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B EXO1P39875 702 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B VTC1P40046 129 aaRIP-Chip data-0.66□□□□□ -2.52not detected
YHL009W-BYHL009W-B SWP82P43554 623 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B YFR018CP43599 363 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B VHT1P53241 593 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B ARK1P53974 638 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B ARO80Q04052 950 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B ARC18Q05933 178 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B YDL073WQ07454 984 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B DIN7Q12086 430 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SMC6Q12749 1114 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B NOP14Q99207 810 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B LAT1P12695 482 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B UTR1P21373 530 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B HEM3P28789 327 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SSE2P32590 693 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B FRD1P32614 470 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B AUR1P36107 401 aaPredicted RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SHE3P38272 425 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B APD1P38281 316 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SWD1P39706 426 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B YER010CP40011 234 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B PKP2P53170 491 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B SOL4P53315 255 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B YGR266WP53326 701 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B FDC1Q03034 503 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B YMR099CQ03161 297 aaKnown RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B TDA1Q03533 586 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B YMR007WQ03675 126 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B VPS38Q05919 439 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B CTI6Q08923 506 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B FMP40Q08968 688 aaPredicted RBP-0.66□□□□□ -2.52
YHL009W-BYHL009W-B NCA2Q12374 616 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B LSO1Q3E827 93 aa-0.66□□□□□ -2.52
YHL009W-BYHL009W-B GLK1P17709 500 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B ZIP1P31111 875 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B HXT3P32466 567 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B ZRT1P32804 376 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B SEN34P39707 275 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B BDH1P39714 382 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B PUG1P40100 303 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B AVT7P40501 490 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B RPR2P40571 144 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B MNN11P46985 422 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B PET130P47065 347 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B YML6P51998 286 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B FLC3P53121 802 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B ATP25Q03153 612 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B HER2Q03557 464 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B POS5Q06892 414 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B SGT2Q12118 346 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B AIM7Q12156 149 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B MRX4Q12467 430 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B YPL247CQ12523 523 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B YCL021W-AQ96VH3 125 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B AAC1P04710 309 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B ARG3P05150 338 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B RPL7AP05737 244 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B RAD52P06778 471 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B TCP1P12612 559 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B MSM1P22438 575 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B PPH21P23594 369 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B GIT1P25346 518 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B PCL2P25693 308 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B ITR1P30605 584 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B CDC12P32468 407 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B CBF2P32504 956 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B RAD23P32628 398 aaKnown RBP-0.67□□□□□ -2.52
YHL009W-BYHL009W-B COT1P32798 439 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B DUT1P33317 147 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B TOM20P35180 183 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B SDS22P36047 338 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B TAE1P38340 232 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B PHO89P38361 574 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B MDM31P38880 579 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B FET3P38993 636 aa-0.67□□□□□ -2.52
YHL009W-BYHL009W-B PFD1P46988 109 aa-0.67□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms