RNA–Protein interactions for RNA: YGL171W

ROK1, Transcript of RNA-dependent ATPase, yeast

Gene ROK1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROK1	YGL171W	YAR1	P46683	200 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	RPS10B	P46784	105 aa	Known RBP	3.77	□□□□□ -1.81
ROK1	YGL171W	SNG1	P46950	547 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	BNA3	P47039	444 aa	Known RBP	3.77	□□□□□ -1.81
ROK1	YGL171W	YDL186W	P48568	277 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
ROK1	YGL171W	ERG5	P54781	538 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	SPP2	Q02521	185 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	GIM5	Q04493	163 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	NOP12	Q08208	459 aa	Known RBP	3.77	□□□□□ -1.81
ROK1	YGL171W	RAX1	Q08760	435 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	LSP1	Q12230	341 aa	Known RBP	3.77	□□□□□ -1.81
ROK1	YGL171W	PRP46	Q12417	451 aa	Predicted RBP	3.77	□□□□□ -1.81
ROK1	YGL171W	UBA3	Q99344	299 aa		3.77	□□□□□ -1.81
ROK1	YGL171W	GDH1	P07262	454 aa	Known RBP	3.76	□□□□□ -1.81
ROK1	YGL171W	PEP4	P07267	405 aa	Known RBP	3.76	□□□□□ -1.81
ROK1	YGL171W	MET16	P18408	261 aa	Predicted RBP	3.76	□□□□□ -1.81
ROK1	YGL171W	COQ1	P18900	473 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	MSB1	P21339	1137 aa	Known RBP	3.76	□□□□□ -1.81
ROK1	YGL171W	PBN1	P25580	416 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	KAR4	P25583	335 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	MSS51	P32335	436 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	ATP11	P32453	318 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	RGT1	P32862	1170 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	PTR2	P32901	601 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	YBR053C	P38235	358 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	YMR262W	P38430	313 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	INM1	P38710	295 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	DBP8	P38719	431 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	ANS1	P38832	159 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	PCF11	P39081	626 aa	Predicted RBP	3.76	□□□□□ -1.81
ROK1	YGL171W	MTW1	P39731	289 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	SNL1	P40548	159 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	HXT9	P40885	567 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	HIT1	P46973	164 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	HXT11	P54862	567 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	RSM23	Q01163	450 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	YMR087W	Q04299	284 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	EMI2	Q04409	500 aa	Known RBP	3.76	□□□□□ -1.81
ROK1	YGL171W	PIG1	Q06216	648 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	YDL057W	Q07379	328 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	MLH3	Q12083	715 aa		3.76	□□□□□ -1.81
ROK1	YGL171W	NCE102	Q12207	173 aa	RIP-Chip data	3.76	□□□□□ -1.81	not detected
ROK1	YGL171W	YPT1	P01123	206 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	RHO1	P06780	209 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	ADE5,7	P07244	802 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	NHP6B	P11633	99 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	ZRC1	P20107	442 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	CSM1	P25651	190 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	RPS5	P26783	225 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	PRR1	P28708	518 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	SKG6	P32900	734 aa	Predicted RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	GDH2	P33327	1092 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	VBA2	P38358	474 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	UBA4	P38820	440 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	RTT107	P38850	1070 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	TFG2	P41896	400 aa	Predicted RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	ABM1	P47146	123 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	AMA1	P50082	593 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	UBC11	P52492	156 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	VPS62	P53285	467 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	ZPR1	P53303	486 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	DIP5	P53388	608 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	CUS2	P53830	285 aa	Predicted RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	APM1	Q00776	475 aa	Predicted RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	MRP51	Q02950	344 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	GGA1	Q06336	557 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	YDL086W	Q07505	273 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	RAD9	P14737	1309 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	CHS1	P08004	1131 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	YLL053C	P0CD98	152 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	FRS2	P15625	503 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	DBR1	P24309	405 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	PPA2	P28239	310 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	PRP21	P32524	280 aa	Predicted RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	COS9	P36034	407 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	MAK5	P38112	773 aa	Predicted RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	YEL020C	P39994	560 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	DSE1	P40077	573 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	RFC4	P40339	323 aa	Known RBP	3.75	□□□□□ -1.81
ROK1	YGL171W	PHO86	P46956	311 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	GLG2	P47011	380 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	MUP1	P50276	574 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	RTT103	Q05543	409 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	GRS2	Q06817	618 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	PAM18	Q07914	168 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	TLG2	Q08144	397 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	THP1	Q08231	455 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	DSE3	Q08729	430 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	TIP41	Q12199	356 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	RUP1	Q12242	671 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	YKL033W-A	Q86ZR7	236 aa		3.75	□□□□□ -1.81
ROK1	YGL171W	ADH2	P00331	348 aa	Known RBP	3.74	□□□□□ -1.81
ROK1	YGL171W	CHO1	P08456	276 aa		3.74	□□□□□ -1.81
ROK1	YGL171W	RPS16A	P0CX51	143 aa	Known RBP	3.74	□□□□□ -1.81
ROK1	YGL171W	RPS16B	P0CX52	143 aa	Known RBP	3.74	□□□□□ -1.81
ROK1	YGL171W	STE4	P18851	423 aa		3.74	□□□□□ -1.81
ROK1	YGL171W	YSR3	P23501	404 aa		3.74	□□□□□ -1.81
ROK1	YGL171W	MSK1	P32048	576 aa		3.74	□□□□□ -1.81
ROK1	YGL171W	ACH1	P32316	526 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms