RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeast

Gene RPN11, Length 921 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN11	YFR004W	DEF1	P35732	738 aa	Known RBP	5.74	□□□□□ -1.49
RPN11	YFR004W	YBR139W	P38109	508 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	ECM8	P38246	354 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	HSE1	P38753	452 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	ATG7	P38862	630 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	CEM1	P39525	442 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	YAR028W	P39548	234 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	YAL037W	P39728	267 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	YER034W	P40022	185 aa	Known RBP	5.74	□□□□□ -1.49
RPN11	YFR004W	GAB1	P41733	394 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	IRC5	P43610	853 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	HXT16	P47185	567 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	SWC4	P53201	476 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	SUR7	P54003	302 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	EGD1	Q02642	157 aa	Known RBP	5.74	□□□□□ -1.49
RPN11	YFR004W	SRL4	Q03085	281 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	TLG1	Q03322	224 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	ARG7	Q04728	441 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	BCH1	Q05029	724 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	ENT2	Q05785	613 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	RPN5	Q12250	445 aa	Known RBP	5.74	□□□□□ -1.49
RPN11	YFR004W	GLE1	Q12315	538 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	GPR1	Q12361	961 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	WTM1	Q12363	437 aa	Known RBP	5.74	□□□□□ -1.49
RPN11	YFR004W	YCL012C	Q8J0M4	134 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	SRN2	Q99176	213 aa		5.74	□□□□□ -1.49
RPN11	YFR004W	TY4B-P	A0A0B7P3V8	1104 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	GPH1	P06738	902 aa	Known RBP	5.73	□□□□□ -1.49
RPN11	YFR004W	RED1	P14291	827 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	DIT1	P21623	536 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	DBP2	P24783	546 aa	Known RBP	5.73	□□□□□ -1.49
RPN11	YFR004W	RNQ1	P25367	405 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	VMA6	P32366	345 aa	Known RBP	5.73	□□□□□ -1.49
RPN11	YFR004W	MTC2	P34246	357 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	RMA1	P36001	430 aa	Known RBP	5.73	□□□□□ -1.49
RPN11	YFR004W	GLG1	P36143	616 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	RIB1	P38066	345 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	BMT2	P38278	337 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	KRE29	P40026	464 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	CFD1	P40558	293 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	STB1	P42845	420 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	YFL066C	P43538	392 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	SWP82	P43554	623 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	YJR096W	P47137	282 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	EFM3	P47163	339 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	LYS5	P50113	272 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	MPS1	P54199	764 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	SDH1	Q00711	640 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	SWP1	Q02795	286 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	GPI17	Q04080	534 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	STP3	Q05937	343 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	ARR1	Q06596	294 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	FMP45	Q07651	309 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	PLB3	Q08108	686 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	YOL131W	Q08270	108 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	BSC6	Q08280	497 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	HER1	Q12276	1246 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	PNS1	Q12412	539 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	MHT1	Q12525	324 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	BRR1	Q99177	341 aa	Predicted RBP	5.73	□□□□□ -1.49
RPN11	YFR004W	MED11	Q99278	115 aa		5.73	□□□□□ -1.49
RPN11	YFR004W	LEU4	P06208	619 aa	Known RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	PUT2	P07275	575 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	RPL43A	P0CX25	92 aa	Known RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	RPL43B	P0CX26	92 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	RSC6	P25632	483 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	CDC12	P32468	407 aa	Known RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	PRP21	P32524	280 aa	Predicted RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	GDH2	P33327	1092 aa	Known RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	PIM1	P36775	1133 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	YCR087C-A	P37263	153 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	IML3	P38265	245 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	COS111	P38308	924 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	RCK1	P38622	512 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	PEX18	P38855	283 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	RPH1	P39956	796 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	YEL020C	P39994	560 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	MEP1	P40260	492 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	TOK1	P40310	691 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	NEO1	P40527	1151 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	ZIM17	P42844	174 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	FAR7	P43592	221 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	SLD3	P53135	668 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	YNL260C	P53846	198 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	AAT1	Q01802	451 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	GRX5	Q02784	150 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	TY1A-DR2	Q03964	440 aa	Known RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	RSM24	Q03976	319 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	CIA1	Q05583	330 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	SSQ1	Q05931	657 aa	Predicted RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	YDL114W	Q07530	308 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	MFG1	Q07684	458 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	THP1	Q08231	455 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	BUD7	Q08754	746 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	YDR056C	Q12025	205 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	TGL5	Q12043	749 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	SMF3	Q12078	473 aa	Predicted RBP	5.72	□□□□□ -1.49
RPN11	YFR004W	YPR011C	Q12251	326 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	YLR126C	Q12288	251 aa		5.72	□□□□□ -1.49
RPN11	YFR004W	YDL199C	Q12407	687 aa		5.72	□□□□□ -1.49

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