RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YDR061WQ12298 539 aa2.86□□□□□ -1.95
VAB2YEL005C SNU66Q12420 587 aaPredicted RBP2.86□□□□□ -1.95
VAB2YEL005C HTZ1Q12692 134 aaKnown RBP2.86□□□□□ -1.95
VAB2YEL005C NFT1P0CE68 1218 aa2.85□□□□□ -1.95
VAB2YEL005C RPL1AP0CX43 217 aaKnown RBP2.85□□□□□ -1.95
VAB2YEL005C RPL1BP0CX44 217 aaKnown RBP2.85□□□□□ -1.95
VAB2YEL005C NIP1P32497 812 aaKnown RBP2.85□□□□□ -1.95
VAB2YEL005C SKN1P33336 771 aa2.85□□□□□ -1.95
VAB2YEL005C DOA1P36037 715 aa2.85□□□□□ -1.95
VAB2YEL005C GDT1P38301 280 aaPredicted RBP2.85□□□□□ -1.95
VAB2YEL005C PAN6P40459 309 aa2.85□□□□□ -1.95
VAB2YEL005C SPG5P42933 373 aa2.85□□□□□ -1.95
VAB2YEL005C TOS3P43637 560 aa2.85□□□□□ -1.95
VAB2YEL005C TLG2Q08144 397 aa2.85□□□□□ -1.95
VAB2YEL005C RAX1Q08760 435 aa2.85□□□□□ -1.95
VAB2YEL005C HSP82P02829 709 aaKnown RBP2.84□□□□□ -1.95
VAB2YEL005C SKT5P34226 696 aa2.84□□□□□ -1.95
VAB2YEL005C RXT2P38255 430 aa2.84□□□□□ -1.95
VAB2YEL005C MNL1P38888 796 aa2.84□□□□□ -1.95
VAB2YEL005C JLP2P40206 208 aa2.84□□□□□ -1.95
VAB2YEL005C ATM1P40416 690 aa2.84□□□□□ -1.95
VAB2YEL005C MAM33P40513 266 aa2.84□□□□□ -1.95
VAB2YEL005C EPL1P43572 832 aa2.84□□□□□ -1.95
VAB2YEL005C MDE1P47095 244 aa2.84□□□□□ -1.95
VAB2YEL005C EOS1P53938 366 aa2.84□□□□□ -1.95
VAB2YEL005C SPR6Q01684 191 aa2.84□□□□□ -1.95
VAB2YEL005C ADA2Q02336 434 aa2.84□□□□□ -1.95
VAB2YEL005C LOT6Q07923 191 aa2.84□□□□□ -1.95
VAB2YEL005C IRC25Q07951 179 aa2.84□□□□□ -1.95
VAB2YEL005C SRN2Q99176 213 aa2.84□□□□□ -1.95
VAB2YEL005C ARF1P11076 181 aaKnown RBP2.83□□□□□ -1.96
VAB2YEL005C RVS161P25343 265 aaKnown RBP2.83□□□□□ -1.96
VAB2YEL005C SWI3P32591 825 aa2.83□□□□□ -1.96
VAB2YEL005C YSC83P32792 385 aa2.83□□□□□ -1.96
VAB2YEL005C QDR3P38227 689 aa2.83□□□□□ -1.96
VAB2YEL005C PFF1P38244 976 aa2.83□□□□□ -1.96
VAB2YEL005C YBR137WP38276 179 aa2.83□□□□□ -1.96
VAB2YEL005C GPI16P38875 610 aa2.83□□□□□ -1.96
VAB2YEL005C REE1P40893 198 aa2.83□□□□□ -1.96
VAB2YEL005C TRM112P53738 135 aaPredicted RBP2.83□□□□□ -1.96
VAB2YEL005C EAF3Q12432 401 aa2.83□□□□□ -1.96
VAB2YEL005C POM152P39685 1337 aa2.83□□□□□ -1.96
VAB2YEL005C TPK3P05986 398 aa2.82□□□□□ -1.96
VAB2YEL005C PIS1P06197 220 aaKnown RBP2.82□□□□□ -1.96
VAB2YEL005C REV1P12689 985 aa2.82□□□□□ -1.96
VAB2YEL005C PUP2P32379 260 aa2.82□□□□□ -1.96
VAB2YEL005C YBL028CP38202 106 aa2.82□□□□□ -1.96
VAB2YEL005C HAC1P41546 238 aa2.82□□□□□ -1.96
VAB2YEL005C ASN2P49090 572 aaKnown RBP2.82□□□□□ -1.96
VAB2YEL005C SDT1P53078 280 aa2.82□□□□□ -1.96
VAB2YEL005C MRM2P53123 320 aa2.82□□□□□ -1.96
VAB2YEL005C MLC1P53141 149 aa2.82□□□□□ -1.96
VAB2YEL005C MTM1P53320 366 aa2.82□□□□□ -1.96
VAB2YEL005C YMR010WQ03687 405 aa2.82□□□□□ -1.96
VAB2YEL005C PRM6Q04705 352 aa2.82□□□□□ -1.96
VAB2YEL005C SNT309Q06091 175 aaPredicted RBP2.82□□□□□ -1.96
VAB2YEL005C NDL1Q06568 189 aa2.82□□□□□ -1.96
VAB2YEL005C AAD15Q08361 143 aa2.82□□□□□ -1.96
VAB2YEL005C RRG7Q08774 242 aaPredicted RBP2.82□□□□□ -1.96
VAB2YEL005C SPT7P35177 1332 aa2.82□□□□□ -1.96
VAB2YEL005C CYC3P06182 269 aa2.81□□□□□ -1.96
VAB2YEL005C CAP2P13517 287 aa2.81□□□□□ -1.96
VAB2YEL005C EXG1P23776 448 aaKnown RBP2.81□□□□□ -1.96
VAB2YEL005C YEL045CP32616 141 aa2.81□□□□□ -1.96
VAB2YEL005C YEF1P32622 495 aa2.81□□□□□ -1.96
VAB2YEL005C MRPL10P36520 322 aa2.81□□□□□ -1.96
VAB2YEL005C RFS1P38234 210 aaKnown RBP2.81□□□□□ -1.96
VAB2YEL005C MSG5P38590 489 aa2.81□□□□□ -1.96
VAB2YEL005C YHR131CP38835 850 aa2.81□□□□□ -1.96
VAB2YEL005C LCB3P47013 409 aa2.81□□□□□ -1.96
VAB2YEL005C AIM24P47127 394 aa2.81□□□□□ -1.96
VAB2YEL005C YIP5P53108 310 aa2.81□□□□□ -1.96
VAB2YEL005C YGR117CP53270 476 aa2.81□□□□□ -1.96
VAB2YEL005C MEH1Q02205 184 aa2.81□□□□□ -1.96
VAB2YEL005C YMR102CQ03177 834 aa2.81□□□□□ -1.96
VAB2YEL005C MRPL35Q06678 367 aa2.81□□□□□ -1.96
VAB2YEL005C MDM36Q06820 579 aa2.81□□□□□ -1.96
VAB2YEL005C SMC5Q08204 1093 aa2.81□□□□□ -1.96
VAB2YEL005C TMS1Q12116 473 aa2.81□□□□□ -1.96
VAB2YEL005C TFB5Q3E7C1 72 aaPredicted RBP2.81□□□□□ -1.96
VAB2YEL005C OPI3P05375 206 aa2.8□□□□□ -1.96
VAB2YEL005C CLN3P13365 580 aa2.8□□□□□ -1.96
VAB2YEL005C RRP7P25368 297 aaPredicted RBP2.8□□□□□ -1.96
VAB2YEL005C MSP1P28737 362 aa2.8□□□□□ -1.96
VAB2YEL005C RAD5P32849 1169 aaPredicted RBP2.8□□□□□ -1.96
VAB2YEL005C STP2P38704 541 aa2.8□□□□□ -1.96
VAB2YEL005C SBE22P38814 852 aa2.8□□□□□ -1.96
VAB2YEL005C YFR057WP43625 151 aa2.8□□□□□ -1.96
VAB2YEL005C RTT102P53330 157 aa2.8□□□□□ -1.96
VAB2YEL005C PRP3Q03338 469 aaPredicted RBP2.8□□□□□ -1.96
VAB2YEL005C RTN1Q04947 295 aaKnown RBP2.8□□□□□ -1.96
VAB2YEL005C RIF2Q06208 395 aa2.8□□□□□ -1.96
VAB2YEL005C CUE5Q08412 411 aaKnown RBP2.8□□□□□ -1.96
VAB2YEL005C JID1Q12350 301 aa2.8□□□□□ -1.96
VAB2YEL005C YOP1Q12402 180 aa2.8□□□□□ -1.96
VAB2YEL005C RPS8AP0CX39 200 aaKnown RBP2.79□□□□□ -1.96
VAB2YEL005C RPS8BP0CX40 200 aaKnown RBP2.79□□□□□ -1.96
VAB2YEL005C RPL12AP0CX53 165 aaKnown RBP2.79□□□□□ -1.96
VAB2YEL005C RPL12BP0CX54 165 aa2.79□□□□□ -1.96
VAB2YEL005C PRR1P28708 518 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms