RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	YDR061W	Q12298	539 aa		4.07	□□□□□ -1.76
NSE3	YDR288W	SUP35	P05453	685 aa	Known RBP	4.06	□□□□□ -1.76
NSE3	YDR288W	RPL6B	P05739	176 aa	Known RBP	4.06	□□□□□ -1.76
NSE3	YDR288W	NAM2	P11325	894 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	SWI3	P32591	825 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	QDR3	P38227	689 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	MNL1	P38888	796 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	COX14	P39103	70 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	PAC11	P40960	533 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	SPG5	P42933	373 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	YGR210C	P42942	411 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	EPL1	P43572	832 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	BTN2	P53286	410 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	RPL6A	Q02326	176 aa	Known RBP	4.06	□□□□□ -1.76
NSE3	YDR288W	NUP116	Q02630	1113 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	RAX1	Q08760	435 aa		4.06	□□□□□ -1.76
NSE3	YDR288W	POP5	P28005	173 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	YSC83	P32792	385 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	STP2	P38704	541 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	ATM1	P40416	690 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	RRP46	P53256	223 aa	Predicted RBP	4.05	□□□□□ -1.76
NSE3	YDR288W	MTM1	P53320	366 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	MTQ1	P53944	314 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	SPR6	Q01684	191 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	NDL1	Q06568	189 aa		4.05	□□□□□ -1.76
NSE3	YDR288W	PUP2	P32379	260 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	DOA1	P36037	715 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	RFS1	P38234	210 aa	Known RBP	4.04	□□□□□ -1.76
NSE3	YDR288W	GDT1	P38301	280 aa	Predicted RBP	4.04	□□□□□ -1.76
NSE3	YDR288W	PAN6	P40459	309 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	REE1	P40893	198 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	YIP5	P53108	310 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	MLC1	P53141	149 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	EOS1	P53938	366 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	MEH1	Q02205	184 aa		4.04	□□□□□ -1.76
NSE3	YDR288W	OPI3	P05375	206 aa		4.03	□□□□□ -1.76
NSE3	YDR288W	CYC3	P06182	269 aa		4.03	□□□□□ -1.76
NSE3	YDR288W	EXG1	P23776	448 aa	Known RBP	4.03	□□□□□ -1.76
NSE3	YDR288W	CHS6	P40955	746 aa		4.03	□□□□□ -1.76
NSE3	YDR288W	MDE1	P47095	244 aa		4.03	□□□□□ -1.76
NSE3	YDR288W	ASN2	P49090	572 aa	Known RBP	4.03	□□□□□ -1.76
NSE3	YDR288W	PAL1	Q05518	499 aa	Known RBP	4.03	□□□□□ -1.76
NSE3	YDR288W	ECM7	Q06200	448 aa		4.03	□□□□□ -1.76
NSE3	YDR288W	TMS1	Q12116	473 aa		4.03	□□□□□ -1.76
NSE3	YDR288W	POM152	P39685	1337 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	TPK3	P05986	398 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	RPS8A	P0CX39	200 aa	Known RBP	4.02	□□□□□ -1.77
NSE3	YDR288W	RPS8B	P0CX40	200 aa	Known RBP	4.02	□□□□□ -1.77
NSE3	YDR288W	ARF1	P11076	181 aa	Known RBP	4.02	□□□□□ -1.77
NSE3	YDR288W	CAP2	P13517	287 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	YKL097C	P34245	136 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	MSG5	P38590	489 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	SIM1	P40472	476 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	MRM2	P53123	320 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	ADA2	Q02336	434 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	MRPL35	Q06678	367 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	FRE6	Q12473	712 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	SRN2	Q99176	213 aa		4.02	□□□□□ -1.77
NSE3	YDR288W	SKT5	P34226	696 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	MRPL4	P36517	319 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	SBE22	P38814	852 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	MLH1	P38920	769 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	MAM33	P40513	266 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	YGR117C	P53270	476 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	RTT102	P53330	157 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	MDM36	Q06820	579 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	IRC25	Q07951	179 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	AAD15	Q08361	143 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	RRG7	Q08774	242 aa	Predicted RBP	4.01	□□□□□ -1.77
NSE3	YDR288W	RNH203	Q12338	110 aa		4.01	□□□□□ -1.77
NSE3	YDR288W	RPL12A	P0CX53	165 aa	Known RBP	4	□□□□□ -1.77
NSE3	YDR288W	RPL12B	P0CX54	165 aa		4	□□□□□ -1.77
NSE3	YDR288W	DPH2	P32461	534 aa		4	□□□□□ -1.77
NSE3	YDR288W	VPH1	P32563	840 aa	Known RBP	4	□□□□□ -1.77
NSE3	YDR288W	YEF1	P32622	495 aa		4	□□□□□ -1.77
NSE3	YDR288W	YBL028C	P38202	106 aa		4	□□□□□ -1.77
NSE3	YDR288W	STE24	P47154	453 aa		4	□□□□□ -1.77
NSE3	YDR288W	TRM112	P53738	135 aa	Predicted RBP	4	□□□□□ -1.77
NSE3	YDR288W	IPK1	Q06667	281 aa		4	□□□□□ -1.77
NSE3	YDR288W	LOT6	Q07923	191 aa		4	□□□□□ -1.77
NSE3	YDR288W	EAF3	Q12432	401 aa		4	□□□□□ -1.77
NSE3	YDR288W	HTZ1	Q12692	134 aa	Known RBP	4	□□□□□ -1.77
NSE3	YDR288W	PIS1	P06197	220 aa	Known RBP	3.99	□□□□□ -1.77
NSE3	YDR288W	CLN3	P13365	580 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	MSP1	P28737	362 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	KAR9	P32526	644 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	SPP381	P38282	291 aa	Predicted RBP	3.99	□□□□□ -1.77
NSE3	YDR288W	APE4	P38821	490 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	HAC1	P41546	238 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
NSE3	YDR288W	PRP3	Q03338	469 aa	Predicted RBP	3.99	□□□□□ -1.77
NSE3	YDR288W	URC2	Q04411	772 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	ASA1	Q06822	443 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	YFH1	Q07540	174 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	SMC5	Q08204	1093 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	YOP1	Q12402	180 aa		3.99	□□□□□ -1.77
NSE3	YDR288W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.99	□□□□□ -1.77
NSE3	YDR288W	RVS161	P25343	265 aa	Known RBP	3.98	□□□□□ -1.77
NSE3	YDR288W	PHA2	P32452	334 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	CSE2	P33308	149 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms