RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W MSC2Q03455 724 aa6.31□□□□□ -1.4
BDF2YDL070W SNX41Q04053 625 aa6.31□□□□□ -1.4
BDF2YDL070W NNT1Q05874 261 aa6.31□□□□□ -1.4
BDF2YDL070W YOR283WQ12040 230 aaKnown RBP6.31□□□□□ -1.4
BDF2YDL070W AEP3Q12089 606 aa6.31□□□□□ -1.4
BDF2YDL070W LYS21Q12122 440 aaKnown RBP6.31□□□□□ -1.4
BDF2YDL070W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
BDF2YDL070W ARP7Q12406 477 aa6.31□□□□□ -1.4
BDF2YDL070W YEL009C-AA0A023PZF2 135 aa6.31□□□□□ -1.4
BDF2YDL070W GAL1P04385 528 aa6.31□□□□□ -1.4
BDF2YDL070W RPP1BP10622 106 aaKnown RBP6.31□□□□□ -1.4
BDF2YDL070W LAT1P12695 482 aaKnown RBP6.31□□□□□ -1.4
BDF2YDL070W CKS1P20486 150 aaKnown RBP6.31□□□□□ -1.4
BDF2YDL070W HOM6P31116 359 aaKnown RBP6.31□□□□□ -1.4
BDF2YDL070W LYP1P32487 611 aa6.31□□□□□ -1.4
BDF2YDL070W YKL077WP36081 392 aa6.31□□□□□ -1.4
BDF2YDL070W VPS29P38759 282 aa6.31□□□□□ -1.4
BDF2YDL070W GID8P40208 455 aa6.31□□□□□ -1.4
BDF2YDL070W PMT4P46971 762 aa6.31□□□□□ -1.4
BDF2YDL070W BIT61P47041 543 aa6.31□□□□□ -1.4
BDF2YDL070W AAD10P47182 288 aa6.31□□□□□ -1.4
BDF2YDL070W HXT11P54862 567 aa6.31□□□□□ -1.4
BDF2YDL070W STP1Q00947 519 aa6.31□□□□□ -1.4
BDF2YDL070W YMR321CQ04898 105 aa6.31□□□□□ -1.4
BDF2YDL070W GRX8Q05926 109 aa6.31□□□□□ -1.4
BDF2YDL070W SKI7Q08491 747 aaPredicted RBP6.31□□□□□ -1.4
BDF2YDL070W TY1A-DR3Q12441 440 aa6.31□□□□□ -1.4
BDF2YDL070W Q0010Q9ZZX9 128 aa6.31□□□□□ -1.4
BDF2YDL070W LAA1P39526 2014 aa6.31□□□□□ -1.4
BDF2YDL070W PEP4P07267 405 aaKnown RBP6.3□□□□□ -1.4
BDF2YDL070W PRP28P23394 588 aa6.3□□□□□ -1.4
BDF2YDL070W NAR1P23503 491 aaKnown RBP6.3□□□□□ -1.4
BDF2YDL070W OAC1P32332 324 aa6.3□□□□□ -1.4
BDF2YDL070W YBL010CP32788 280 aa6.3□□□□□ -1.4
BDF2YDL070W VPS17P32913 551 aa6.3□□□□□ -1.4
BDF2YDL070W RPT1P33299 467 aaKnown RBP6.3□□□□□ -1.4
BDF2YDL070W MKS1P34072 584 aa6.3□□□□□ -1.4
BDF2YDL070W TAT1P38085 619 aa6.3□□□□□ -1.4
BDF2YDL070W APM3P38153 483 aa6.3□□□□□ -1.4
BDF2YDL070W BFR1P38934 470 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
BDF2YDL070W PAN6P40459 309 aa6.3□□□□□ -1.4
BDF2YDL070W HMS2P47175 358 aa6.3□□□□□ -1.4
BDF2YDL070W TIS11P47977 285 aa6.3□□□□□ -1.4
BDF2YDL070W IMO32P53219 342 aa6.3□□□□□ -1.4
BDF2YDL070W MET31Q03081 177 aa6.3□□□□□ -1.4
BDF2YDL070W YMR279CQ03263 540 aa6.3□□□□□ -1.4
BDF2YDL070W YMR087WQ04299 284 aa6.3□□□□□ -1.4
BDF2YDL070W SPG3Q04398 127 aaPredicted RBP6.3□□□□□ -1.4
BDF2YDL070W BUR2Q05949 395 aa6.3□□□□□ -1.4
BDF2YDL070W TPO3Q06451 622 aa6.3□□□□□ -1.4
BDF2YDL070W GPN3Q06543 272 aa6.3□□□□□ -1.4
BDF2YDL070W SVS1Q12254 260 aa6.3□□□□□ -1.4
BDF2YDL070W YRM1Q12340 786 aa6.3□□□□□ -1.4
BDF2YDL070W CHL1P22516 861 aaPredicted RBP6.29□□□□□ -1.4
BDF2YDL070W RPS1BP23248 255 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W DBP1P24784 617 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W MF(ALPHA)2P32435 120 aa6.29□□□□□ -1.4
BDF2YDL070W PET127P32606 800 aa6.29□□□□□ -1.4
BDF2YDL070W PDC2P32896 925 aa6.29□□□□□ -1.4
BDF2YDL070W CDC1P40986 491 aa6.29□□□□□ -1.4
BDF2YDL070W CWC24P53769 259 aa6.29□□□□□ -1.4
BDF2YDL070W IGO1P53897 168 aa6.29□□□□□ -1.4
BDF2YDL070W EFM6P53970 246 aa6.29□□□□□ -1.4
BDF2YDL070W ERV25P54837 211 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W IRC15Q02733 499 aa6.29□□□□□ -1.4
BDF2YDL070W CRR1Q05790 422 aa6.29□□□□□ -1.4
BDF2YDL070W YOR238WQ08634 303 aa6.29□□□□□ -1.4
BDF2YDL070W FRE5Q08908 694 aa6.29□□□□□ -1.4
BDF2YDL070W NMD4Q12129 218 aa6.29□□□□□ -1.4
BDF2YDL070W RPN5Q12250 445 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W TFS1P14306 219 aa6.29□□□□□ -1.4
BDF2YDL070W GLN3P18494 730 aa6.29□□□□□ -1.4
BDF2YDL070W PRP2P20095 876 aaPredicted RBP6.29□□□□□ -1.4
BDF2YDL070W SYP1P25623 870 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W COQ2P32378 372 aa6.29□□□□□ -1.4
BDF2YDL070W SRY1P36007 326 aa6.29□□□□□ -1.4
BDF2YDL070W YBR063CP38083 404 aa6.29□□□□□ -1.4
BDF2YDL070W CDS1P38221 457 aa6.29□□□□□ -1.4
BDF2YDL070W KSP1P38691 1029 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W IMD2P38697 523 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W YHR035WP38769 630 aa6.29□□□□□ -1.4
BDF2YDL070W NSG1P38837 291 aa6.29□□□□□ -1.4
BDF2YDL070W LSM5P40089 93 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W YMR144WP40214 342 aaKnown RBP6.29□□□□□ -1.4
BDF2YDL070W YIL077CP40508 320 aa6.29□□□□□ -1.4
BDF2YDL070W GTT1P40582 234 aa6.29□□□□□ -1.4
BDF2YDL070W IRC7P43623 340 aa6.29□□□□□ -1.4
BDF2YDL070W SNG1P46950 547 aa6.29□□□□□ -1.4
BDF2YDL070W HOS2P53096 452 aaPredicted RBP6.29□□□□□ -1.4
BDF2YDL070W BUD9P53226 547 aa6.29□□□□□ -1.4
BDF2YDL070W PEF1P53238 335 aa6.29□□□□□ -1.4
BDF2YDL070W ARR2Q06597 130 aa6.29□□□□□ -1.4
BDF2YDL070W LDB18Q07887 179 aa6.29□□□□□ -1.4
BDF2YDL070W APC5Q08683 685 aa6.29□□□□□ -1.4
BDF2YDL070W YTM1Q12024 460 aaPredicted RBP6.29□□□□□ -1.4
BDF2YDL070W DGK1Q12382 290 aa6.29□□□□□ -1.4
BDF2YDL070W KAR1P11927 433 aa6.28□□□□□ -1.4
BDF2YDL070W RNA14P25298 677 aaKnown RBP6.28□□□□□ -1.4
BDF2YDL070W ARE1P25628 610 aa6.28□□□□□ -1.4
BDF2YDL070W SRB6P32570 121 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms