RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W MON2P48563 1636 aaPredicted RBP11.37□□□□□ -0.59
BDF2YDL070W INO80P53115 1489 aa11.36□□□□□ -0.59
BDF2YDL070W DNA2P38859 1522 aa10.8□□□□□ -0.68
BDF2YDL070W SWR1Q05471 1514 aa10.77□□□□□ -0.69
BDF2YDL070W KOG1P38873 1557 aa10.69□□□□□ -0.7
BDF2YDL070W TCB3Q03640 1545 aaKnown RBP10.65□□□□□ -0.7
BDF2YDL070W TY1B-DR4Q07793 1604 aa10.63□□□□□ -0.71
BDF2YDL070W RSE1Q04693 1361 aaKnown RBP10.51□□□□□ -0.73
BDF2YDL070W SGS1P35187 1447 aa10.36□□□□□ -0.75
BDF2YDL070W SPA2P23201 1466 aaKnown RBP10.26□□□□□ -0.77
BDF2YDL070W SPT6P23615 1451 aaKnown RBP10.22□□□□□ -0.77
BDF2YDL070W HSL1P34244 1518 aa10.22□□□□□ -0.77
BDF2YDL070W SSN2P38931 1420 aa10.14□□□□□ -0.79
BDF2YDL070W ECM5Q03214 1411 aa10.04□□□□□ -0.8
BDF2YDL070W THO2P53552 1597 aaKnown RBP9.99□□□□□ -0.81
BDF2YDL070W HIR3P47171 1648 aa9.99□□□□□ -0.81
BDF2YDL070W MTC1P47018 478 aaKnown RBP9.99□□□□□ -0.81
BDF2YDL070W BUD4P47136 1447 aa9.96□□□□□ -0.81
BDF2YDL070W DRS1P32892 752 aaKnown RBP9.92□□□□□ -0.82
BDF2YDL070W MDS3P53094 1487 aa9.88□□□□□ -0.83
BDF2YDL070W XRN1P22147 1528 aaKnown RBP9.79□□□□□ -0.84
BDF2YDL070W PEP1P32319 1579 aa9.74□□□□□ -0.85
BDF2YDL070W SKI3P17883 1432 aaKnown RBP9.73□□□□□ -0.85
BDF2YDL070W REV3P14284 1504 aa9.73□□□□□ -0.85
BDF2YDL070W ATG2P53855 1592 aa9.68□□□□□ -0.86
BDF2YDL070W BPT1P14772 1559 aa9.67□□□□□ -0.86
BDF2YDL070W NOP2P40991 618 aaKnown RBP9.54□□□□□ -0.88
BDF2YDL070W SSK2P53599 1579 aa9.51□□□□□ -0.89
BDF2YDL070W TAF2P23255 1407 aa9.49□□□□□ -0.89
BDF2YDL070W YCF1P39109 1515 aaKnown RBP9.49□□□□□ -0.89
BDF2YDL070W SIN3P22579 1536 aa9.47□□□□□ -0.89
BDF2YDL070W NSR1P27476 414 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
BDF2YDL070W ESP1Q03018 1630 aa9.41□□□□□ -0.9
BDF2YDL070W MMS22Q06164 1454 aa9.38□□□□□ -0.91
BDF2YDL070W CHD1P32657 1468 aa9.36□□□□□ -0.91
BDF2YDL070W UFD4P33202 1483 aa9.34□□□□□ -0.91
BDF2YDL070W ESC1Q03661 1658 aaKnown RBP9.28□□□□□ -0.92
BDF2YDL070W MYO2P19524 1574 aaKnown RBP9.27□□□□□ -0.93
BDF2YDL070W BFR2Q06631 534 aaKnown RBP9.27□□□□□ -0.93
BDF2YDL070W SCC2Q04002 1493 aa9.25□□□□□ -0.93
BDF2YDL070W MIF2P35201 549 aa9.25□□□□□ -0.93
BDF2YDL070W CDC25P04821 1589 aa9.24□□□□□ -0.93
BDF2YDL070W YPK9Q12697 1472 aa9.23□□□□□ -0.93
BDF2YDL070W MET5P47169 1442 aa9.22□□□□□ -0.93
BDF2YDL070W TY2B-LR1P0C2J3 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-FP0CX63 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-GR2P0CX64 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-CP25384 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-DR2Q03494 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY1B-DR1Q03855 1755 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-DR3Q07791 1770 aaKnown RBP9.21□□□□□ -0.94
BDF2YDL070W TY2B-OR1Q12113 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-DR1Q12472 1770 aa9.21□□□□□ -0.94
BDF2YDL070W TY2B-OR2Q12501 1770 aa9.21□□□□□ -0.94
BDF2YDL070W RQC2Q12532 1038 aaKnown RBP9.19□□□□□ -0.94
BDF2YDL070W TY1B-BRQ12193 1756 aa9.18□□□□□ -0.94
BDF2YDL070W TY1B-GR3Q12316 1755 aa9.18□□□□□ -0.94
BDF2YDL070W TY1B-ORQ92393 1755 aa9.18□□□□□ -0.94
BDF2YDL070W RPO31P04051 1460 aa9.18□□□□□ -0.94
BDF2YDL070W DNF1P32660 1571 aa9.17□□□□□ -0.94
BDF2YDL070W LTE1P07866 1435 aa9.16□□□□□ -0.94
BDF2YDL070W RKR1Q04781 1562 aa9.15□□□□□ -0.94
BDF2YDL070W SAS10Q12136 610 aaPredicted RBP9.15□□□□□ -0.95
BDF2YDL070W RPA190P10964 1664 aaKnown RBP9.15□□□□□ -0.95
BDF2YDL070W PAN1P32521 1480 aa9.12□□□□□ -0.95
BDF2YDL070W TRM732Q03496 1420 aa9.11□□□□□ -0.95
BDF2YDL070W IKI3Q06706 1349 aaKnown RBP9.09□□□□□ -0.95
BDF2YDL070W TY2B-BQ12491 1770 aa9.09□□□□□ -0.95
BDF2YDL070W TY1B-HO13535 1793 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-DR5P0C2I2 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-DR6P0C2I3 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-LR2P0C2I5 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-LR3P0C2I6 1755 aaKnown RBP9.08□□□□□ -0.96
BDF2YDL070W TY1B-PR1P0C2I9 1755 aaKnown RBP9.08□□□□□ -0.96
BDF2YDL070W TY1B-PR2P0C2J0 1756 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-PR3P0C2J1 1755 aaKnown RBP9.08□□□□□ -0.96
BDF2YDL070W TY1B-JR1P47098 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-ML2Q03434 1755 aaKnown RBP9.08□□□□□ -0.96
BDF2YDL070W TY1B-ER1Q03612 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-ML1Q04711 1755 aaKnown RBP9.08□□□□□ -0.96
BDF2YDL070W TY1B-GR2Q12269 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-OLQ12273 1755 aa9.08□□□□□ -0.96
BDF2YDL070W TY1B-PLQ12414 1755 aaKnown RBP9.08□□□□□ -0.96
BDF2YDL070W BNI1P41832 1953 aa9.08□□□□□ -0.96
BDF2YDL070W GEA2P39993 1459 aaKnown RBP9.06□□□□□ -0.96
BDF2YDL070W ENP1P38333 483 aaKnown RBP9.05□□□□□ -0.96
BDF2YDL070W YTA7P40340 1379 aa9.05□□□□□ -0.96
BDF2YDL070W TY1B-DR3Q99231 1755 aa9.04□□□□□ -0.96
BDF2YDL070W STU1P38198 1513 aa9.04□□□□□ -0.96
BDF2YDL070W TOP2P06786 1428 aaKnown RBP9.03□□□□□ -0.96
BDF2YDL070W SPP41P38904 1435 aa9.03□□□□□ -0.96
BDF2YDL070W ABP1P15891 592 aaKnown RBP9□□□□□ -0.97
BDF2YDL070W ITT1Q04638 464 aa8.99□□□□□ -0.97
BDF2YDL070W POL1P13382 1468 aa8.98□□□□□ -0.97
BDF2YDL070W POL5P39985 1022 aaKnown RBP8.97□□□□□ -0.97
BDF2YDL070W YRF1-1P0CX20 1796 aa8.95□□□□□ -0.98
BDF2YDL070W YRF1-5P0CX21 1796 aa8.95□□□□□ -0.98
BDF2YDL070W YRF1-8P0CX22 1796 aa8.95□□□□□ -0.98
BDF2YDL070W SSM4P40318 1319 aa8.95□□□□□ -0.98
BDF2YDL070W MMS1Q06211 1407 aa8.94□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms