RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAF1	YBR279W	TOS3	P43637	560 aa		4.26	□□□□□ -1.73
PAF1	YBR279W	NUP116	Q02630	1113 aa		4.26	□□□□□ -1.73
PAF1	YBR279W	LOT6	Q07923	191 aa		4.26	□□□□□ -1.73
PAF1	YBR279W	NFT1	P0CE68	1218 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	RVS161	P25343	265 aa	Known RBP	4.25	□□□□□ -1.73
PAF1	YBR279W	SKN1	P33336	771 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	YOX1	P34161	385 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	SDS24	P38314	527 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	MAM33	P40513	266 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	PAC11	P40960	533 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	SHE10	P53075	577 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	YDR541C	Q03049	344 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	SNT309	Q06091	175 aa	Predicted RBP	4.25	□□□□□ -1.73
PAF1	YBR279W	MRPL35	Q06678	367 aa		4.25	□□□□□ -1.73
PAF1	YBR279W	RPL1A	P0CX43	217 aa	Known RBP	4.24	□□□□□ -1.73
PAF1	YBR279W	RPL1B	P0CX44	217 aa	Known RBP	4.24	□□□□□ -1.73
PAF1	YBR279W	SLM5	P25345	492 aa	Known RBP	4.24	□□□□□ -1.73
PAF1	YBR279W	KAR9	P32526	644 aa		4.24	□□□□□ -1.73
PAF1	YBR279W	MSG5	P38590	489 aa		4.24	□□□□□ -1.73
PAF1	YBR279W	RCF1	Q03713	159 aa		4.24	□□□□□ -1.73
PAF1	YBR279W	CYC3	P06182	269 aa		4.23	□□□□□ -1.73
PAF1	YBR279W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PAF1	YBR279W	GDT1	P38301	280 aa	Predicted RBP	4.23	□□□□□ -1.73
PAF1	YBR279W	RRP46	P53256	223 aa	Predicted RBP	4.23	□□□□□ -1.73
PAF1	YBR279W	ADA2	Q02336	434 aa		4.23	□□□□□ -1.73
PAF1	YBR279W	NDL1	Q06568	189 aa		4.23	□□□□□ -1.73
PAF1	YBR279W	MDM36	Q06820	579 aa		4.23	□□□□□ -1.73
PAF1	YBR279W	HRT3	Q12347	344 aa		4.23	□□□□□ -1.73
PAF1	YBR279W	RPS8A	P0CX39	200 aa	Known RBP	4.22	□□□□□ -1.73
PAF1	YBR279W	RPS8B	P0CX40	200 aa	Known RBP	4.22	□□□□□ -1.73
PAF1	YBR279W	CLN3	P13365	580 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	SKT5	P34226	696 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	DOA1	P36037	715 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	KAP104	P38217	918 aa	Known RBP	4.22	□□□□□ -1.73
PAF1	YBR279W	SEC28	P40509	296 aa	Known RBP	4.22	□□□□□ -1.73
PAF1	YBR279W	ROG1	P53118	685 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	MRM2	P53123	320 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	SPR6	Q01684	191 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	PRP3	Q03338	469 aa	Predicted RBP	4.22	□□□□□ -1.73
PAF1	YBR279W	YMR027W	Q04371	470 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	PRM6	Q04705	352 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	SMC5	Q08204	1093 aa		4.22	□□□□□ -1.73
PAF1	YBR279W	HTZ1	Q12692	134 aa	Known RBP	4.22	□□□□□ -1.73
PAF1	YBR279W	HSP82	P02829	709 aa	Known RBP	4.21	□□□□□ -1.73
PAF1	YBR279W	LDB16	P25587	256 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	ATM1	P40416	690 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	EFM4	P40516	257 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	YGR117C	P53270	476 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	ERO1	Q03103	563 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	JID1	Q12350	301 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	WTM1	Q12363	437 aa	Known RBP	4.21	□□□□□ -1.73
PAF1	YBR279W	EAF3	Q12432	401 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	SRN2	Q99176	213 aa		4.21	□□□□□ -1.73
PAF1	YBR279W	ADH2	P00331	348 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	RPL6B	P05739	176 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	PIS1	P06197	220 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	ARF1	P11076	181 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	CAP2	P13517	287 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	ISY1	P21374	235 aa	Predicted RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	EXG1	P23776	448 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	YEF1	P32622	495 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	QDR3	P38227	689 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	SBE22	P38814	852 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	GPI16	P38875	610 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	PRE5	P40302	234 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	HAC1	P41546	238 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	RPL6A	Q02326	176 aa	Known RBP	4.21	□□□□□ -1.74
PAF1	YBR279W	YMR102C	Q03177	834 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	FDH1	Q08911	376 aa		4.21	□□□□□ -1.74
PAF1	YBR279W	POM152	P39685	1337 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	RPB5	P20434	215 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	PRR1	P28708	518 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	PHA2	P32452	334 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	SWD3	P38123	315 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	SIM1	P40472	476 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	YFR057W	P43625	151 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	AIM24	P47127	394 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	ASN2	P49090	572 aa	Known RBP	4.2	□□□□□ -1.74
PAF1	YBR279W	YGL039W	P53183	348 aa	Known RBP	4.2	□□□□□ -1.74
PAF1	YBR279W	SHY1	P53266	389 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	AAD15	Q08361	143 aa		4.2	□□□□□ -1.74
PAF1	YBR279W	YGK3	Q12222	375 aa	Predicted RBP	4.2	□□□□□ -1.74
PAF1	YBR279W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PAF1	YBR279W	PUP2	P32379	260 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	YSC83	P32792	385 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	RAD5	P32849	1169 aa	Predicted RBP	4.19	□□□□□ -1.74
PAF1	YBR279W	PFF1	P38244	976 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	WSS1	P38838	269 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	MLC1	P53141	149 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	RTT102	P53330	157 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	TRM112	P53738	135 aa	Predicted RBP	4.19	□□□□□ -1.74
PAF1	YBR279W	RTN1	Q04947	295 aa	Known RBP	4.19	□□□□□ -1.74
PAF1	YBR279W	YDR061W	Q12298	539 aa		4.19	□□□□□ -1.74
PAF1	YBR279W	TPK3	P05986	398 aa		4.18	□□□□□ -1.74
PAF1	YBR279W	MSI1	P13712	422 aa		4.18	□□□□□ -1.74
PAF1	YBR279W	CSE2	P33308	149 aa		4.18	□□□□□ -1.74
PAF1	YBR279W	MRPL4	P36517	319 aa		4.18	□□□□□ -1.74
PAF1	YBR279W	MRPL10	P36520	322 aa		4.18	□□□□□ -1.74
PAF1	YBR279W	YBL028C	P38202	106 aa		4.18	□□□□□ -1.74
PAF1	YBR279W	STP2	P38704	541 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms