RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YFR016CP43597 1233 aaKnown RBP2.22□□□□□ -2.05
PRP6YBR055C YGL082WP53155 381 aa2.22□□□□□ -2.05
PRP6YBR055C TDA7P53882 636 aaPredicted RBP2.22□□□□□ -2.05
PRP6YBR055C MMT1Q03218 510 aa2.22□□□□□ -2.05
PRP6YBR055C GRX3Q03835 250 aa2.22□□□□□ -2.05
PRP6YBR055C CAB5Q03941 241 aa2.22□□□□□ -2.05
PRP6YBR055C AIM33Q04516 312 aa2.22□□□□□ -2.05
PRP6YBR055C ECI1Q05871 280 aa2.22□□□□□ -2.05
PRP6YBR055C KAP95Q06142 861 aaKnown RBP2.22□□□□□ -2.05
PRP6YBR055C MRPL35Q06678 367 aa2.22□□□□□ -2.05
PRP6YBR055C YPR078CQ06813 372 aa2.22□□□□□ -2.05
PRP6YBR055C RRT8Q08219 342 aa2.22□□□□□ -2.05
PRP6YBR055C ORT1Q12375 292 aa2.22□□□□□ -2.05
PRP6YBR055C UFD4P33202 1483 aa2.22□□□□□ -2.05
PRP6YBR055C RPL42AP0CX27 106 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C RPL42BP0CX28 106 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C RPL12AP0CX53 165 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C RPL12BP0CX54 165 aa2.21□□□□□ -2.06
PRP6YBR055C YAP1P19880 650 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C DBR1P24309 405 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C MSK1P32048 576 aa2.21□□□□□ -2.06
PRP6YBR055C MRPL37P36532 105 aa2.21□□□□□ -2.06
PRP6YBR055C CSM2P40465 213 aa2.21□□□□□ -2.06
PRP6YBR055C YIL024CP40543 189 aa2.21□□□□□ -2.06
PRP6YBR055C SPG5P42933 373 aa2.21□□□□□ -2.06
PRP6YBR055C DBP6P53734 629 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C FRE4P53746 719 aa2.21□□□□□ -2.06
PRP6YBR055C ERG13P54839 491 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C BET5Q03630 159 aa2.21□□□□□ -2.06
PRP6YBR055C RNH1Q04740 348 aa2.21□□□□□ -2.06
PRP6YBR055C ASA1Q06822 443 aa2.21□□□□□ -2.06
PRP6YBR055C THI20Q08224 551 aa2.21□□□□□ -2.06
PRP6YBR055C CRC1Q12289 327 aa2.21□□□□□ -2.06
PRP6YBR055C BNR1P40450 1375 aa2.21□□□□□ -2.06
PRP6YBR055C TY1B-JR2P47100 1755 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C TY1B-ER2Q03619 1755 aa2.21□□□□□ -2.06
PRP6YBR055C TY1B-MR1Q04214 1755 aa2.21□□□□□ -2.06
PRP6YBR055C TY1B-MR2Q04670 1755 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C TY1B-LR1Q12088 1755 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C TY1B-NL1Q12112 1755 aa2.21□□□□□ -2.06
PRP6YBR055C TY1B-GR1Q12141 1755 aa2.21□□□□□ -2.06
PRP6YBR055C TY1B-BLQ12490 1755 aa2.21□□□□□ -2.06
PRP6YBR055C YBR056W-AI2HB52 66 aa2.21□□□□□ -2.06
PRP6YBR055C YLL053CP0CD98 152 aa2.21□□□□□ -2.06
PRP6YBR055C HNM1P19807 563 aa2.21□□□□□ -2.06
PRP6YBR055C MBR1P23493 339 aa2.21□□□□□ -2.06
PRP6YBR055C SMC2P38989 1170 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C QRI1P43123 477 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C AGX1P43567 385 aa2.21□□□□□ -2.06
PRP6YBR055C RIB4P50861 169 aaPredicted RBP2.21□□□□□ -2.06
PRP6YBR055C SHE10P53075 577 aa2.21□□□□□ -2.06
PRP6YBR055C IRC15Q02733 499 aa2.21□□□□□ -2.06
PRP6YBR055C PNG1Q02890 363 aa2.21□□□□□ -2.06
PRP6YBR055C RLI1Q03195 608 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C YDR415CQ04033 374 aaPredicted RBP2.21□□□□□ -2.06
PRP6YBR055C MRPL51Q06090 140 aaPredicted RBP2.21□□□□□ -2.06
PRP6YBR055C SGT2Q12118 346 aaKnown RBP2.21□□□□□ -2.06
PRP6YBR055C YPR022CQ12139 1133 aa2.21□□□□□ -2.06
PRP6YBR055C TUB1P09733 447 aaKnown RBP2.2□□□□□ -2.06
PRP6YBR055C PRP16P15938 1071 aaPredicted RBP2.2□□□□□ -2.06
PRP6YBR055C SPO12P17123 173 aa2.2□□□□□ -2.06
PRP6YBR055C UGA1P17649 471 aa2.2□□□□□ -2.06
PRP6YBR055C YCR100CP25606 316 aa2.2□□□□□ -2.06
PRP6YBR055C YPS1P32329 569 aa2.2□□□□□ -2.06
PRP6YBR055C COX13P32799 129 aa2.2□□□□□ -2.06
PRP6YBR055C YNK1P36010 153 aaKnown RBP2.2□□□□□ -2.06
PRP6YBR055C DOA1P36037 715 aa2.2□□□□□ -2.06
PRP6YBR055C SPC34P36131 295 aa2.2□□□□□ -2.06
PRP6YBR055C RTC2P38279 296 aa2.2□□□□□ -2.06
PRP6YBR055C TOM71P38825 639 aaKnown RBP2.2□□□□□ -2.06
PRP6YBR055C ATM1P40416 690 aa2.2□□□□□ -2.06
PRP6YBR055C AZF1P41696 914 aa2.2□□□□□ -2.06
PRP6YBR055C YGL185CP53100 379 aa2.2□□□□□ -2.06
PRP6YBR055C YGR266WP53326 701 aa2.2□□□□□ -2.06
PRP6YBR055C ESBP6P53918 673 aa2.2□□□□□ -2.06
PRP6YBR055C MRP51Q02950 344 aa2.2□□□□□ -2.06
PRP6YBR055C RSN1Q03516 953 aa2.2□□□□□ -2.06
PRP6YBR055C SMP3Q04174 516 aa2.2□□□□□ -2.06
PRP6YBR055C CSI1Q04368 295 aa2.2□□□□□ -2.06
PRP6YBR055C SYO1Q07395 620 aa2.2□□□□□ -2.06
PRP6YBR055C AIM45Q12480 344 aaKnown RBP2.2□□□□□ -2.06
PRP6YBR055C FSH3Q99369 266 aa2.2□□□□□ -2.06
PRP6YBR055C ARF1P11076 181 aaKnown RBP2.2□□□□□ -2.06
PRP6YBR055C LSB5P25369 354 aa2.2□□□□□ -2.06
PRP6YBR055C PAD1P33751 242 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
PRP6YBR055C YKL070WP36087 169 aa2.2□□□□□ -2.06
PRP6YBR055C PEX18P38855 283 aa2.2□□□□□ -2.06
PRP6YBR055C TOS2P50078 622 aa2.2□□□□□ -2.06
PRP6YBR055C VOA1P53262 265 aa2.2□□□□□ -2.06
PRP6YBR055C MPP6P53725 186 aaPredicted RBP2.2□□□□□ -2.06
PRP6YBR055C YPL068CQ02749 293 aa2.2□□□□□ -2.06
PRP6YBR055C BNA5Q05979 453 aa2.2□□□□□ -2.06
PRP6YBR055C VAC14Q06708 880 aa2.2□□□□□ -2.06
PRP6YBR055C LDS2Q08218 356 aa2.2□□□□□ -2.06
PRP6YBR055C SKI7Q08491 747 aaPredicted RBP2.2□□□□□ -2.06
PRP6YBR055C YDL009CQ12210 107 aa2.2□□□□□ -2.06
PRP6YBR055C VPS15P22219 1454 aa2.2□□□□□ -2.06
PRP6YBR055C SUP35P05453 685 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C TPK3P05986 398 aa2.19□□□□□ -2.06
PRP6YBR055C CLN3P13365 580 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms