RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Nfu1Q9QZ23 255 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Kank3Q9Z1P7 791 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Eme2Q56A04 373 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Atp2b4Q6Q477 1205 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 PccaQ91ZA3 724 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Dqx1Q924H9 718 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Arfgap2Q99K28 520 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Zfp984A2A7A2 547 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 C2cd2E9Q3C1 696 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Guca2bO09051 106 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ap1g2O88512 791 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Becn2P0DM65 447 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Rps6ka1P18653 724 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mcm5P49718 733 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Opa1P58281 960 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Klra4Q60651 263 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Pank4Q80YV4 820 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 3830417A13RikQ8BQJ2 303 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ccdc87Q8CDL9 855 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Oxnad1Q8VE38 311 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Bzw2Q91VK1 419 aaKnown RBP20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Golph3Q9CRA5 298 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 PpihQ9D868 188 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 EmcnQ9R0H2 261 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ccdc88cQ6VGS5 2009 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Krt36B1AQ75 473 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Sema3eP70275 775 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Klra9Q2TJJ8 266 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Tmprss11aQ3UQ41 389 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Skap1Q3UUV5 355 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Lrrc36Q3V0M2 755 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Map3k12Q60700 888 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Epha7Q61772 998 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Tmc4Q7TQ65 694 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Sumf1Q8R0F3 372 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 F11Q91Y47 624 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Pex11aQ9Z211 246 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Col4a5Q63ZW6 1691 aa20.51■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Dnaaf5B9EJR8 853 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ccdc24E9PUW8 296 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Zfp408H7BX78 710 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Muc3aQ3U5A2 218 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Pls1Q3V0K9 630 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Vmn1r209Q5NC97 312 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Sin3bQ62141 1098 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Six2Q62232 296 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mcf2lQ64096 1149 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 KaznQ69ZS8 779 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Klhl7Q8BUL5 586 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Riox2Q8CD15 465 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Depdc1aQ8CIG0 804 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Myl7Q9QVP4 175 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Fam71aB7XG49 585 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ap1b1O35643 943 aaKnown RBP20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Kcnu1O54982 1121 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ublcp1Q8BGR9 318 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ces4aQ8R0W5 563 aa20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Eif3hQ91WK2 352 aaKnown RBP20.5■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Myh14Q6URW6 2000 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Dcaf17Q3TUL7 519 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Pde1cQ64338 706 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Git1Q68FF6 770 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Acad11Q80XL6 779 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Rnf187Q8BFX1 236 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Q8BWG4 1187 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Stx17Q9D0I4 301 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Capn9Q9D805 690 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Eif2ak1Q9Z2R9 619 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Gucy1b3O54865 620 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Snap25P60879 206 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Brip1Q5SXJ3 1174 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ankrd13dQ6PD24 605 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Tmc3Q7TQ69 1130 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Calml4Q91WQ9 153 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Lrp2bpQ9D4C6 346 aa20.49■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Usp31E9Q6Y8 1344 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mtcl1Q3UHU5 1945 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 ProcP33587 460 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Usp4P35123 962 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Hspa9P38647 679 aaKnown RBP20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mybl2P48972 704 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Krt35Q497I4 455 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 1810065E05RikQ5NC41 235 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 MslnlQ8C160 685 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Slc40a1Q9JHI9 570 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Nrxn2E9Q7X7 1710 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 1700016G14RikA0A286YCZ6 238 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Prdm11A2AGX3 565 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 TyrobpO54885 114 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ogfod1Q3U0K8 545 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Tcp10aQ80W76 438 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 SpidrQ8BGX7 933 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Haus1Q8BHX1 278 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Nup58Q8R332 587 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 GzmnQ920S1 248 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Rexo2Q9D8S4 237 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 SmapQ9R0P4 181 aaKnown RBP20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mtmr2Q9Z2D1 643 aa20.48■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Col1a1P11087 1453 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Col2a1P28481 1487 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms