Protein–RNA interactions for Protein: Q3U5A2

Muc3a, Mucin 3A, cell surface-associated (Fragment), mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Muc3aQ3U5A2 Gm25239-201ENSMUST00000174915 86 ntBASIC38.62■■■■□ 3.77
Muc3aQ3U5A2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Muc3aQ3U5A2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Muc3aQ3U5A2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
Muc3aQ3U5A2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Muc3aQ3U5A2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Muc3aQ3U5A2 Psd-208ENSMUST00000224556 2034 ntBASIC34.51■■■■□ 3.12
Muc3aQ3U5A2 Gm15042-201ENSMUST00000120212 883 ntBASIC34.38■■■■□ 3.09
Muc3aQ3U5A2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Muc3aQ3U5A2 Gm15045-201ENSMUST00000117359 883 ntBASIC33.82■■■■□ 3
Muc3aQ3U5A2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
Muc3aQ3U5A2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.47■■■□□ 2.95
Muc3aQ3U5A2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Muc3aQ3U5A2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Muc3aQ3U5A2 Gm24109-201ENSMUST00000175489 103 ntBASIC33.23■■■□□ 2.91
Muc3aQ3U5A2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Muc3aQ3U5A2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Muc3aQ3U5A2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Muc3aQ3U5A2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Muc3aQ3U5A2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Muc3aQ3U5A2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Muc3aQ3U5A2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Muc3aQ3U5A2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Muc3aQ3U5A2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Muc3aQ3U5A2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
Muc3aQ3U5A2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Muc3aQ3U5A2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.53■■■□□ 2.8
Muc3aQ3U5A2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Muc3aQ3U5A2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Muc3aQ3U5A2 Gm23366-201ENSMUST00000175022 89 ntBASIC32.28■■■□□ 2.76
Muc3aQ3U5A2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Muc3aQ3U5A2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.21■■■□□ 2.75
Muc3aQ3U5A2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Muc3aQ3U5A2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Muc3aQ3U5A2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Muc3aQ3U5A2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Muc3aQ3U5A2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Muc3aQ3U5A2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Muc3aQ3U5A2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Muc3aQ3U5A2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Muc3aQ3U5A2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Muc3aQ3U5A2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.64■■■□□ 2.66
Muc3aQ3U5A2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Muc3aQ3U5A2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.58■■■□□ 2.65
Muc3aQ3U5A2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.57■■■□□ 2.64
Muc3aQ3U5A2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Muc3aQ3U5A2 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.43■■■□□ 2.62
Muc3aQ3U5A2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Muc3aQ3U5A2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Muc3aQ3U5A2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Muc3aQ3U5A2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Muc3aQ3U5A2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Muc3aQ3U5A2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.9■■■□□ 2.54
Muc3aQ3U5A2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Muc3aQ3U5A2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Muc3aQ3U5A2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Muc3aQ3U5A2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Muc3aQ3U5A2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.75■■■□□ 2.51
Muc3aQ3U5A2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Muc3aQ3U5A2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.68■■■□□ 2.5
Muc3aQ3U5A2 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.66■■■□□ 2.5
Muc3aQ3U5A2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Muc3aQ3U5A2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Muc3aQ3U5A2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Muc3aQ3U5A2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.53■■■□□ 2.48
Muc3aQ3U5A2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Muc3aQ3U5A2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Muc3aQ3U5A2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Muc3aQ3U5A2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Muc3aQ3U5A2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Muc3aQ3U5A2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Muc3aQ3U5A2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Muc3aQ3U5A2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Muc3aQ3U5A2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Muc3aQ3U5A2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.32■■■□□ 2.44
Muc3aQ3U5A2 Gm25238-201ENSMUST00000174914 89 ntBASIC30.31■■■□□ 2.44
Muc3aQ3U5A2 Gm27325-201ENSMUST00000175467 74 ntBASIC30.29■■■□□ 2.44
Muc3aQ3U5A2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Muc3aQ3U5A2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Muc3aQ3U5A2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Muc3aQ3U5A2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
Muc3aQ3U5A2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Muc3aQ3U5A2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Muc3aQ3U5A2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.06■■■□□ 2.4
Muc3aQ3U5A2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Muc3aQ3U5A2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Muc3aQ3U5A2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.95■■■□□ 2.39
Muc3aQ3U5A2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Muc3aQ3U5A2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Muc3aQ3U5A2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Muc3aQ3U5A2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Muc3aQ3U5A2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Muc3aQ3U5A2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
Muc3aQ3U5A2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Muc3aQ3U5A2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Muc3aQ3U5A2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Muc3aQ3U5A2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Muc3aQ3U5A2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Muc3aQ3U5A2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Muc3aQ3U5A2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms