Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm25239-201ENSMUST00000174915 86 ntBASIC38.72■■■■□ 3.79
Kcnu1O54982 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Kcnu1O54982 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Kcnu1O54982 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
Kcnu1O54982 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Kcnu1O54982 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Kcnu1O54982 Psd-208ENSMUST00000224556 2034 ntBASIC34.52■■■■□ 3.12
Kcnu1O54982 Gm15042-201ENSMUST00000120212 883 ntBASIC34.47■■■■□ 3.11
Kcnu1O54982 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Kcnu1O54982 Gm15045-201ENSMUST00000117359 883 ntBASIC33.89■■■■□ 3.02
Kcnu1O54982 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Kcnu1O54982 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.5■■■□□ 2.95
Kcnu1O54982 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Kcnu1O54982 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Kcnu1O54982 Gm24109-201ENSMUST00000175489 103 ntBASIC33.3■■■□□ 2.92
Kcnu1O54982 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Kcnu1O54982 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Kcnu1O54982 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Kcnu1O54982 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Kcnu1O54982 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Kcnu1O54982 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Kcnu1O54982 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Kcnu1O54982 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Kcnu1O54982 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Kcnu1O54982 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
Kcnu1O54982 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Kcnu1O54982 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.57■■■□□ 2.8
Kcnu1O54982 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Kcnu1O54982 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Kcnu1O54982 Gm23366-201ENSMUST00000175022 89 ntBASIC32.36■■■□□ 2.77
Kcnu1O54982 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Kcnu1O54982 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.24■■■□□ 2.75
Kcnu1O54982 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Kcnu1O54982 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kcnu1O54982 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Kcnu1O54982 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Kcnu1O54982 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Kcnu1O54982 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Kcnu1O54982 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Kcnu1O54982 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Kcnu1O54982 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.65■■■□□ 2.66
Kcnu1O54982 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.65■■■□□ 2.66
Kcnu1O54982 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Kcnu1O54982 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Kcnu1O54982 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.62■■■□□ 2.65
Kcnu1O54982 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.46■■■□□ 2.63
Kcnu1O54982 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Kcnu1O54982 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Kcnu1O54982 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Kcnu1O54982 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Kcnu1O54982 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Kcnu1O54982 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Kcnu1O54982 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.89■■■□□ 2.54
Kcnu1O54982 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Kcnu1O54982 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Kcnu1O54982 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Kcnu1O54982 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.78■■■□□ 2.52
Kcnu1O54982 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Kcnu1O54982 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.76■■■□□ 2.51
Kcnu1O54982 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Kcnu1O54982 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.69■■■□□ 2.5
Kcnu1O54982 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Kcnu1O54982 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Kcnu1O54982 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Kcnu1O54982 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
Kcnu1O54982 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Kcnu1O54982 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Kcnu1O54982 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Kcnu1O54982 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Kcnu1O54982 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Kcnu1O54982 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.38■■■□□ 2.45
Kcnu1O54982 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Kcnu1O54982 Gm25238-201ENSMUST00000174914 89 ntBASIC30.37■■■□□ 2.45
Kcnu1O54982 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Kcnu1O54982 Gm27325-201ENSMUST00000175467 74 ntBASIC30.35■■■□□ 2.45
Kcnu1O54982 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Kcnu1O54982 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Kcnu1O54982 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.27■■■□□ 2.44
Kcnu1O54982 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Kcnu1O54982 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Kcnu1O54982 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Kcnu1O54982 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Kcnu1O54982 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Kcnu1O54982 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.14■■■□□ 2.42
Kcnu1O54982 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Kcnu1O54982 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Kcnu1O54982 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.03■■■□□ 2.4
Kcnu1O54982 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Kcnu1O54982 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Kcnu1O54982 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Kcnu1O54982 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Kcnu1O54982 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Kcnu1O54982 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Kcnu1O54982 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kcnu1O54982 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kcnu1O54982 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Kcnu1O54982 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Kcnu1O54982 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kcnu1O54982 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.75■■■□□ 2.35
Kcnu1O54982 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms