Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Gm25239-201ENSMUST00000174915 86 ntBASIC44,58■■■■■ 4,73
Pls1Q3V0K9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41,25■■■■■ 4,19
Pls1Q3V0K9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,69■■■■■ 4,1
Pls1Q3V0K9 Gm15042-201ENSMUST00000120212 883 ntBASIC38,91■■■■□ 3,82
Pls1Q3V0K9 Gm24109-201ENSMUST00000175489 103 ntBASIC38,62■■■■□ 3,77
Pls1Q3V0K9 Gm15045-201ENSMUST00000117359 883 ntBASIC38,02■■■■□ 3,68
Pls1Q3V0K9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37,93■■■■□ 3,66
Pls1Q3V0K9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37,8■■■■□ 3,64
Pls1Q3V0K9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,63■■■■□ 3,61
Pls1Q3V0K9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37,5■■■■□ 3,59
Pls1Q3V0K9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37,33■■■■□ 3,57
Pls1Q3V0K9 Gm23366-201ENSMUST00000175022 89 ntBASIC37,23■■■■□ 3,55
Pls1Q3V0K9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,02■■■■□ 3,52
Pls1Q3V0K9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36,72■■■■□ 3,47
Pls1Q3V0K9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,31■■■■□ 3,4
Pls1Q3V0K9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,08■■■■□ 3,37
Pls1Q3V0K9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,36
Pls1Q3V0K9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,94■■■■□ 3,34
Pls1Q3V0K9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35,85■■■■□ 3,33
Pls1Q3V0K9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35,85■■■■□ 3,33
Pls1Q3V0K9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35,82■■■■□ 3,32
Pls1Q3V0K9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,7■■■■□ 3,31
Pls1Q3V0K9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35,67■■■■□ 3,3
Pls1Q3V0K9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35,52■■■■□ 3,28
Pls1Q3V0K9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35,4■■■■□ 3,26
Pls1Q3V0K9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35,37■■■■□ 3,25
Pls1Q3V0K9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,35■■■■□ 3,25
Pls1Q3V0K9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35,33■■■■□ 3,25
Pls1Q3V0K9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,31■■■■□ 3,24
Pls1Q3V0K9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35,21■■■■□ 3,23
Pls1Q3V0K9 Gm25238-201ENSMUST00000174914 89 ntBASIC35,2■■■■□ 3,23
Pls1Q3V0K9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35,18■■■■□ 3,22
Pls1Q3V0K9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,18■■■■□ 3,22
Pls1Q3V0K9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35,09■■■■□ 3,21
Pls1Q3V0K9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35,06■■■■□ 3,2
Pls1Q3V0K9 Psd-208ENSMUST00000224556 2034 ntBASIC34,97■■■■□ 3,19
Pls1Q3V0K9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34,79■■■■□ 3,16
Pls1Q3V0K9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,5■■■■□ 3,11
Pls1Q3V0K9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34,45■■■■□ 3,11
Pls1Q3V0K9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,37■■■■□ 3,09
Pls1Q3V0K9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,32■■■■□ 3,08
Pls1Q3V0K9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34,29■■■■□ 3,08
Pls1Q3V0K9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34,12■■■■□ 3,05
Pls1Q3V0K9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34,09■■■■□ 3,05
Pls1Q3V0K9 Gm27325-201ENSMUST00000175467 74 ntBASIC34,08■■■■□ 3,05
Pls1Q3V0K9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34,05■■■■□ 3,04
Pls1Q3V0K9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34,03■■■■□ 3,04
Pls1Q3V0K9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,01■■■■□ 3,04
Pls1Q3V0K9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33,93■■■■□ 3,02
Pls1Q3V0K9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33,93■■■■□ 3,02
Pls1Q3V0K9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33,81■■■■□ 3
Pls1Q3V0K9 Gm25262-201ENSMUST00000174934 133 ntBASIC33,77■■■■□ 3
Pls1Q3V0K9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33,59■■■□□ 2,97
Pls1Q3V0K9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33,59■■■□□ 2,97
Pls1Q3V0K9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33,56■■■□□ 2,96
Pls1Q3V0K9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33,56■■■□□ 2,96
Pls1Q3V0K9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33,56■■■□□ 2,96
Pls1Q3V0K9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33,56■■■□□ 2,96
Pls1Q3V0K9 Rab21-202ENSMUST00000218831 843 ntBASIC33,5■■■□□ 2,95
Pls1Q3V0K9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,41■■■□□ 2,94
Pls1Q3V0K9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33,39■■■□□ 2,94
Pls1Q3V0K9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33,27■■■□□ 2,92
Pls1Q3V0K9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33,25■■■□□ 2,91
Pls1Q3V0K9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33,25■■■□□ 2,91
Pls1Q3V0K9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33,21■■■□□ 2,91
Pls1Q3V0K9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33,19■■■□□ 2,9
Pls1Q3V0K9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33,17■■■□□ 2,9
Pls1Q3V0K9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33,12■■■□□ 2,89
Pls1Q3V0K9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,1■■■□□ 2,89
Pls1Q3V0K9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33,07■■■□□ 2,88
Pls1Q3V0K9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,07■■■□□ 2,88
Pls1Q3V0K9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33,06■■■□□ 2,88
Pls1Q3V0K9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,03■■■□□ 2,88
Pls1Q3V0K9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,01■■■□□ 2,87
Pls1Q3V0K9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32,99■■■□□ 2,87
Pls1Q3V0K9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32,99■■■□□ 2,87
Pls1Q3V0K9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32,99■■■□□ 2,87
Pls1Q3V0K9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Pls1Q3V0K9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Pls1Q3V0K9 Gm26115-201ENSMUST00000175605 87 ntBASIC32,95■■■□□ 2,87
Pls1Q3V0K9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,93■■■□□ 2,86
Pls1Q3V0K9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Pls1Q3V0K9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Pls1Q3V0K9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Pls1Q3V0K9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,83■■■□□ 2,85
Pls1Q3V0K9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32,8■■■□□ 2,84
Pls1Q3V0K9 Gm10524-201ENSMUST00000181931 1893 ntBASIC32,78■■■□□ 2,84
Pls1Q3V0K9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32,76■■■□□ 2,83
Pls1Q3V0K9 Gm8109-201ENSMUST00000194076 746 ntBASIC32,76■■■□□ 2,83
Pls1Q3V0K9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32,75■■■□□ 2,83
Pls1Q3V0K9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,72■■■□□ 2,83
Pls1Q3V0K9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,66■■■□□ 2,82
Pls1Q3V0K9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32,66■■■□□ 2,82
Pls1Q3V0K9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32,65■■■□□ 2,82
Pls1Q3V0K9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32,64■■■□□ 2,82
Pls1Q3V0K9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Pls1Q3V0K9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32,59■■■□□ 2,81
Pls1Q3V0K9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32,54■■■□□ 2,8
Pls1Q3V0K9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32,51■■■□□ 2,79
Pls1Q3V0K9 Gm42596-201ENSMUST00000196305 1958 ntBASIC32,48■■■□□ 2,79
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms