Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Gm25239-201ENSMUST00000174915 86 ntBASIC44.58■■■■■ 4.73
Pls1Q3V0K9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.25■■■■■ 4.19
Pls1Q3V0K9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
Pls1Q3V0K9 Gm15042-201ENSMUST00000120212 883 ntBASIC38.91■■■■□ 3.82
Pls1Q3V0K9 Gm24109-201ENSMUST00000175489 103 ntBASIC38.62■■■■□ 3.77
Pls1Q3V0K9 Gm15045-201ENSMUST00000117359 883 ntBASIC38.02■■■■□ 3.68
Pls1Q3V0K9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Pls1Q3V0K9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Pls1Q3V0K9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.63■■■■□ 3.61
Pls1Q3V0K9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Pls1Q3V0K9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Pls1Q3V0K9 Gm23366-201ENSMUST00000175022 89 ntBASIC37.23■■■■□ 3.55
Pls1Q3V0K9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Pls1Q3V0K9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.72■■■■□ 3.47
Pls1Q3V0K9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pls1Q3V0K9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.08■■■■□ 3.37
Pls1Q3V0K9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Pls1Q3V0K9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.94■■■■□ 3.34
Pls1Q3V0K9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.85■■■■□ 3.33
Pls1Q3V0K9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
Pls1Q3V0K9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.82■■■■□ 3.32
Pls1Q3V0K9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.7■■■■□ 3.31
Pls1Q3V0K9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pls1Q3V0K9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Pls1Q3V0K9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Pls1Q3V0K9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
Pls1Q3V0K9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Pls1Q3V0K9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.33■■■■□ 3.25
Pls1Q3V0K9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Pls1Q3V0K9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.21■■■■□ 3.23
Pls1Q3V0K9 Gm25238-201ENSMUST00000174914 89 ntBASIC35.2■■■■□ 3.23
Pls1Q3V0K9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Pls1Q3V0K9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Pls1Q3V0K9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.09■■■■□ 3.21
Pls1Q3V0K9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
Pls1Q3V0K9 Psd-208ENSMUST00000224556 2034 ntBASIC34.97■■■■□ 3.19
Pls1Q3V0K9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
Pls1Q3V0K9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.5■■■■□ 3.11
Pls1Q3V0K9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.45■■■■□ 3.11
Pls1Q3V0K9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Pls1Q3V0K9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.32■■■■□ 3.08
Pls1Q3V0K9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Pls1Q3V0K9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
Pls1Q3V0K9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.09■■■■□ 3.05
Pls1Q3V0K9 Gm27325-201ENSMUST00000175467 74 ntBASIC34.08■■■■□ 3.05
Pls1Q3V0K9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.05■■■■□ 3.04
Pls1Q3V0K9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Pls1Q3V0K9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Pls1Q3V0K9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Pls1Q3V0K9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.93■■■■□ 3.02
Pls1Q3V0K9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.81■■■■□ 3
Pls1Q3V0K9 Gm25262-201ENSMUST00000174934 133 ntBASIC33.77■■■■□ 3
Pls1Q3V0K9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.59■■■□□ 2.97
Pls1Q3V0K9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Pls1Q3V0K9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Pls1Q3V0K9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.56■■■□□ 2.96
Pls1Q3V0K9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Pls1Q3V0K9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Pls1Q3V0K9 Rab21-202ENSMUST00000218831 843 ntBASIC33.5■■■□□ 2.95
Pls1Q3V0K9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.41■■■□□ 2.94
Pls1Q3V0K9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Pls1Q3V0K9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Pls1Q3V0K9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Pls1Q3V0K9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Pls1Q3V0K9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.21■■■□□ 2.91
Pls1Q3V0K9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.19■■■□□ 2.9
Pls1Q3V0K9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Pls1Q3V0K9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.12■■■□□ 2.89
Pls1Q3V0K9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
Pls1Q3V0K9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
Pls1Q3V0K9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.07■■■□□ 2.88
Pls1Q3V0K9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Pls1Q3V0K9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.03■■■□□ 2.88
Pls1Q3V0K9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Pls1Q3V0K9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pls1Q3V0K9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pls1Q3V0K9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Pls1Q3V0K9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Pls1Q3V0K9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Pls1Q3V0K9 Gm26115-201ENSMUST00000175605 87 ntBASIC32.95■■■□□ 2.87
Pls1Q3V0K9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pls1Q3V0K9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pls1Q3V0K9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Pls1Q3V0K9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Pls1Q3V0K9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pls1Q3V0K9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Pls1Q3V0K9 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.78■■■□□ 2.84
Pls1Q3V0K9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Pls1Q3V0K9 Gm8109-201ENSMUST00000194076 746 ntBASIC32.76■■■□□ 2.83
Pls1Q3V0K9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pls1Q3V0K9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pls1Q3V0K9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Pls1Q3V0K9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.66■■■□□ 2.82
Pls1Q3V0K9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.65■■■□□ 2.82
Pls1Q3V0K9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pls1Q3V0K9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pls1Q3V0K9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.59■■■□□ 2.81
Pls1Q3V0K9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.54■■■□□ 2.8
Pls1Q3V0K9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.51■■■□□ 2.79
Pls1Q3V0K9 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.48■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 719.2 ms