Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Gm25239-201ENSMUST00000174915 86 ntBASIC37.9■■■■□ 3.66
Rnf187Q8BFX1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rnf187Q8BFX1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Rnf187Q8BFX1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Rnf187Q8BFX1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.19■■■■□ 3.06
Rnf187Q8BFX1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Rnf187Q8BFX1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Rnf187Q8BFX1 Gm15042-201ENSMUST00000120212 883 ntBASIC33.66■■■□□ 2.98
Rnf187Q8BFX1 Psd-208ENSMUST00000224556 2034 ntBASIC33.51■■■□□ 2.95
Rnf187Q8BFX1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rnf187Q8BFX1 Gm15045-201ENSMUST00000117359 883 ntBASIC32.96■■■□□ 2.87
Rnf187Q8BFX1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Rnf187Q8BFX1 Gm24109-201ENSMUST00000175489 103 ntBASIC32.59■■■□□ 2.81
Rnf187Q8BFX1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rnf187Q8BFX1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.15■■■□□ 2.74
Rnf187Q8BFX1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Rnf187Q8BFX1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rnf187Q8BFX1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rnf187Q8BFX1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rnf187Q8BFX1 Gm23366-201ENSMUST00000175022 89 ntBASIC31.79■■■□□ 2.68
Rnf187Q8BFX1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rnf187Q8BFX1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Rnf187Q8BFX1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rnf187Q8BFX1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rnf187Q8BFX1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rnf187Q8BFX1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rnf187Q8BFX1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rnf187Q8BFX1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rnf187Q8BFX1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rnf187Q8BFX1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Rnf187Q8BFX1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Rnf187Q8BFX1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rnf187Q8BFX1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Rnf187Q8BFX1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.38■■■□□ 2.61
Rnf187Q8BFX1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rnf187Q8BFX1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rnf187Q8BFX1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Rnf187Q8BFX1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.02■■■□□ 2.56
Rnf187Q8BFX1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Rnf187Q8BFX1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.85■■■□□ 2.53
Rnf187Q8BFX1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rnf187Q8BFX1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rnf187Q8BFX1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rnf187Q8BFX1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rnf187Q8BFX1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.52■■■□□ 2.48
Rnf187Q8BFX1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rnf187Q8BFX1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.42■■■□□ 2.46
Rnf187Q8BFX1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rnf187Q8BFX1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rnf187Q8BFX1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.35■■■□□ 2.45
Rnf187Q8BFX1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Rnf187Q8BFX1 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.34■■■□□ 2.45
Rnf187Q8BFX1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rnf187Q8BFX1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rnf187Q8BFX1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.08■■■□□ 2.41
Rnf187Q8BFX1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.06■■■□□ 2.4
Rnf187Q8BFX1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rnf187Q8BFX1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Rnf187Q8BFX1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rnf187Q8BFX1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rnf187Q8BFX1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rnf187Q8BFX1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rnf187Q8BFX1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
Rnf187Q8BFX1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rnf187Q8BFX1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
Rnf187Q8BFX1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rnf187Q8BFX1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rnf187Q8BFX1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.75■■■□□ 2.35
Rnf187Q8BFX1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rnf187Q8BFX1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Rnf187Q8BFX1 Gm25238-201ENSMUST00000174914 89 ntBASIC29.72■■■□□ 2.35
Rnf187Q8BFX1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rnf187Q8BFX1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rnf187Q8BFX1 Gm27325-201ENSMUST00000175467 74 ntBASIC29.59■■■□□ 2.33
Rnf187Q8BFX1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rnf187Q8BFX1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rnf187Q8BFX1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
Rnf187Q8BFX1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
Rnf187Q8BFX1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Rnf187Q8BFX1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.48■■■□□ 2.31
Rnf187Q8BFX1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.46■■■□□ 2.31
Rnf187Q8BFX1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rnf187Q8BFX1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rnf187Q8BFX1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rnf187Q8BFX1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rnf187Q8BFX1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.41■■■□□ 2.3
Rnf187Q8BFX1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
Rnf187Q8BFX1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf187Q8BFX1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf187Q8BFX1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Rnf187Q8BFX1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rnf187Q8BFX1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Rnf187Q8BFX1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Rnf187Q8BFX1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rnf187Q8BFX1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rnf187Q8BFX1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.03■■■□□ 2.24
Rnf187Q8BFX1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rnf187Q8BFX1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rnf187Q8BFX1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.01■■■□□ 2.23
Rnf187Q8BFX1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms