Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm25239-201ENSMUST00000174915 86 ntBASIC43.8■■■■■ 4.6
Depdc1aQ8CIG0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
Depdc1aQ8CIG0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
Depdc1aQ8CIG0 Gm15042-201ENSMUST00000120212 883 ntBASIC38.41■■■■□ 3.74
Depdc1aQ8CIG0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
Depdc1aQ8CIG0 Gm24109-201ENSMUST00000175489 103 ntBASIC37.92■■■■□ 3.66
Depdc1aQ8CIG0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Depdc1aQ8CIG0 Gm15045-201ENSMUST00000117359 883 ntBASIC37.63■■■■□ 3.61
Depdc1aQ8CIG0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Depdc1aQ8CIG0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.13■■■■□ 3.54
Depdc1aQ8CIG0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.95■■■■□ 3.51
Depdc1aQ8CIG0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Depdc1aQ8CIG0 Gm23366-201ENSMUST00000175022 89 ntBASIC36.57■■■■□ 3.44
Depdc1aQ8CIG0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Depdc1aQ8CIG0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Depdc1aQ8CIG0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.88■■■■□ 3.33
Depdc1aQ8CIG0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Depdc1aQ8CIG0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
Depdc1aQ8CIG0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Depdc1aQ8CIG0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
Depdc1aQ8CIG0 Psd-208ENSMUST00000224556 2034 ntBASIC35.41■■■■□ 3.26
Depdc1aQ8CIG0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Depdc1aQ8CIG0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Depdc1aQ8CIG0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Depdc1aQ8CIG0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.26■■■■□ 3.23
Depdc1aQ8CIG0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.24■■■■□ 3.23
Depdc1aQ8CIG0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Depdc1aQ8CIG0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.11■■■■□ 3.21
Depdc1aQ8CIG0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.09■■■■□ 3.21
Depdc1aQ8CIG0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Depdc1aQ8CIG0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.82■■■■□ 3.16
Depdc1aQ8CIG0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Depdc1aQ8CIG0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Depdc1aQ8CIG0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Depdc1aQ8CIG0 Gm25238-201ENSMUST00000174914 89 ntBASIC34.53■■■■□ 3.12
Depdc1aQ8CIG0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.49■■■■□ 3.11
Depdc1aQ8CIG0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.44■■■■□ 3.1
Depdc1aQ8CIG0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Depdc1aQ8CIG0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Depdc1aQ8CIG0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Depdc1aQ8CIG0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Depdc1aQ8CIG0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Depdc1aQ8CIG0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Depdc1aQ8CIG0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.85■■■■□ 3.01
Depdc1aQ8CIG0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.85■■■■□ 3.01
Depdc1aQ8CIG0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Depdc1aQ8CIG0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Depdc1aQ8CIG0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.77■■■■□ 3
Depdc1aQ8CIG0 Gm27325-201ENSMUST00000175467 74 ntBASIC33.71■■■□□ 2.99
Depdc1aQ8CIG0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Depdc1aQ8CIG0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.61■■■□□ 2.97
Depdc1aQ8CIG0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Depdc1aQ8CIG0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Depdc1aQ8CIG0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.47■■■□□ 2.95
Depdc1aQ8CIG0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Depdc1aQ8CIG0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.35■■■□□ 2.93
Depdc1aQ8CIG0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Depdc1aQ8CIG0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.32■■■□□ 2.92
Depdc1aQ8CIG0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.3■■■□□ 2.92
Depdc1aQ8CIG0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Depdc1aQ8CIG0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.12■■■□□ 2.89
Depdc1aQ8CIG0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Depdc1aQ8CIG0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Depdc1aQ8CIG0 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.01■■■□□ 2.88
Depdc1aQ8CIG0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Depdc1aQ8CIG0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Depdc1aQ8CIG0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Depdc1aQ8CIG0 Rab21-202ENSMUST00000218831 843 ntBASIC32.98■■■□□ 2.87
Depdc1aQ8CIG0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Depdc1aQ8CIG0 Gm25262-201ENSMUST00000174934 133 ntBASIC32.95■■■□□ 2.87
Depdc1aQ8CIG0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Depdc1aQ8CIG0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Depdc1aQ8CIG0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Depdc1aQ8CIG0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Depdc1aQ8CIG0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.85■■■□□ 2.85
Depdc1aQ8CIG0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Depdc1aQ8CIG0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.79■■■□□ 2.84
Depdc1aQ8CIG0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Depdc1aQ8CIG0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Depdc1aQ8CIG0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Depdc1aQ8CIG0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.64■■■□□ 2.82
Depdc1aQ8CIG0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Depdc1aQ8CIG0 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.61■■■□□ 2.81
Depdc1aQ8CIG0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Depdc1aQ8CIG0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.58■■■□□ 2.81
Depdc1aQ8CIG0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Depdc1aQ8CIG0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Depdc1aQ8CIG0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.42■■■□□ 2.78
Depdc1aQ8CIG0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Depdc1aQ8CIG0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.41■■■□□ 2.78
Depdc1aQ8CIG0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Depdc1aQ8CIG0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Depdc1aQ8CIG0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Depdc1aQ8CIG0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Depdc1aQ8CIG0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.27■■■□□ 2.76
Depdc1aQ8CIG0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Depdc1aQ8CIG0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Depdc1aQ8CIG0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.11■■■□□ 2.73
Depdc1aQ8CIG0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.09■■■□□ 2.73
Depdc1aQ8CIG0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms