RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 PAP2P53632 584 aaKnown RBP-2.19□□□□□ -2.76
snR40snR40 GMC1Q04399 608 aa-2.19□□□□□ -2.76
snR40snR40 RTC5Q12108 567 aaKnown RBP-2.19□□□□□ -2.76
snR40snR40 RIO1Q12196 484 aaKnown RBP-2.19□□□□□ -2.76
snR40snR40 LDB17Q12342 491 aa-2.19□□□□□ -2.76
snR40snR40 MRX4Q12467 430 aa-2.19□□□□□ -2.76
snR40snR40 RTP1Q12751 981 aa-2.19□□□□□ -2.76
snR40snR40 RPL26AP05743 127 aaKnown RBP-2.2□□□□□ -2.76
snR40snR40 SPB1P25582 841 aaPredicted RBP-2.2□□□□□ -2.76
snR40snR40 DAL3P32459 195 aa-2.2□□□□□ -2.76
snR40snR40 TOA1P32773 286 aa-2.2□□□□□ -2.76
snR40snR40 BNA4P38169 460 aa-2.2□□□□□ -2.76
snR40snR40 SWD1P39706 426 aa-2.2□□□□□ -2.76
snR40snR40 PEP8P40335 379 aa-2.2□□□□□ -2.76
snR40snR40 MRM2P53123 320 aa-2.2□□□□□ -2.76
snR40snR40 RPL26BP53221 127 aaKnown RBP-2.2□□□□□ -2.76
snR40snR40 SSU72P53538 206 aaPredicted RBP-2.2□□□□□ -2.76
snR40snR40 YNR048WP53740 393 aa-2.2□□□□□ -2.76
snR40snR40 AQR1P53943 586 aa-2.2□□□□□ -2.76
snR40snR40 ORC1P54784 914 aaPredicted RBP-2.2□□□□□ -2.76
snR40snR40 SNU66Q12420 587 aaPredicted RBP-2.2□□□□□ -2.76
snR40snR40 CDC15P27636 974 aa-2.21□□□□□ -2.76
snR40snR40 CIS3P47001 227 aa-2.21□□□□□ -2.76
snR40snR40 YGR250CP53316 781 aaKnown RBP-2.21□□□□□ -2.76
snR40snR40 YNR029CP53729 429 aaKnown RBP-2.21□□□□□ -2.76
snR40snR40 PRM1P53835 661 aa-2.21□□□□□ -2.76
snR40snR40 APC4Q04601 652 aa-2.21□□□□□ -2.76
snR40snR40 RIM20Q12033 661 aa-2.21□□□□□ -2.76
snR40snR40 EMC6Q12431 108 aa-2.21□□□□□ -2.76
snR40snR40 HSH49Q99181 213 aaPredicted RBP-2.21□□□□□ -2.76
snR40snR40 ROX1P25042 368 aa-2.22□□□□□ -2.76
snR40snR40 RAD57P25301 460 aa-2.22□□□□□ -2.76
snR40snR40 SYN8P31377 255 aa-2.22□□□□□ -2.76
snR40snR40 AFG1P32317 509 aa-2.22□□□□□ -2.76
snR40snR40 RPL32P38061 130 aaKnown RBP-2.22□□□□□ -2.76
snR40snR40 AIM24P47127 394 aa-2.22□□□□□ -2.76
snR40snR40 AZR1P50080 613 aa-2.22□□□□□ -2.76
snR40snR40 SED5Q01590 340 aa-2.22□□□□□ -2.76
snR40snR40 TFB2Q02939 513 aa-2.22□□□□□ -2.76
snR40snR40 ATP2P00830 511 aaKnown RBP-2.23□□□□□ -2.77
snR40snR40 ATP11P32453 318 aa-2.23□□□□□ -2.77
snR40snR40 NUP133P36161 1157 aa-2.23□□□□□ -2.77
snR40snR40 SHE3P38272 425 aaKnown RBP-2.23□□□□□ -2.77
snR40snR40 ECO1P43605 281 aa-2.23□□□□□ -2.77
snR40snR40 YFR045WP43617 309 aa-2.23□□□□□ -2.77
snR40snR40 BUD22Q04347 519 aaKnown RBP-2.23□□□□□ -2.77
snR40snR40 BCH1Q05029 724 aa-2.23□□□□□ -2.77
snR40snR40 YOR376WQ08900 122 aa-2.23□□□□□ -2.77
snR40snR40 GIT1P25346 518 aa-2.24□□□□□ -2.77
snR40snR40 BOS1P25385 244 aa-2.24□□□□□ -2.77
snR40snR40 YCL049CP25577 312 aa-2.24□□□□□ -2.77
snR40snR40 PHA2P32452 334 aa-2.24□□□□□ -2.77
snR40snR40 NUP120P35729 1037 aa-2.24□□□□□ -2.77
snR40snR40 YHK8P38776 514 aa-2.24□□□□□ -2.77
snR40snR40 COX14P39103 70 aa-2.24□□□□□ -2.77
snR40snR40 BUR6P40096 142 aa-2.24□□□□□ -2.77
snR40snR40 ICE2P40499 491 aa-2.24□□□□□ -2.77
snR40snR40 ASG7P46993 209 aa-2.24□□□□□ -2.77
snR40snR40 LCB3P47013 409 aa-2.24□□□□□ -2.77
snR40snR40 URB2P47108 1174 aa-2.24□□□□□ -2.77
snR40snR40 ASE1P50275 885 aa-2.24□□□□□ -2.77
snR40snR40 YNR061CP53747 219 aa-2.24□□□□□ -2.77
snR40snR40 TDA1Q03533 586 aa-2.24□□□□□ -2.77
snR40snR40 SMC5Q08204 1093 aa-2.24□□□□□ -2.77
snR40snR40 YPL264CQ08980 353 aa-2.24□□□□□ -2.77
snR40snR40 YLR125WQ12138 136 aa-2.24□□□□□ -2.77
snR40snR40 MAM33P40513 266 aa-2.25□□□□□ -2.77
snR40snR40 PTR3P43606 678 aa-2.25□□□□□ -2.77
snR40snR40 CTK3P46963 296 aaPredicted RBP-2.25□□□□□ -2.77
snR40snR40 NAS6P50086 228 aa-2.25□□□□□ -2.77
snR40snR40 DIA3P52290 468 aa-2.25□□□□□ -2.77
snR40snR40 ZPR1P53303 486 aaKnown RBP-2.25□□□□□ -2.77
snR40snR40 EFM6P53970 246 aa-2.25□□□□□ -2.77
snR40snR40 RMI1Q02685 241 aa-2.25□□□□□ -2.77
snR40snR40 YLR177WQ06251 628 aa-2.25□□□□□ -2.77
snR40snR40 CDC53Q12018 815 aaKnown RBP-2.25□□□□□ -2.77
snR40snR40 ARG4P04076 463 aaPredicted RBP-2.26□□□□□ -2.77
snR40snR40 SKI2P35207 1287 aaKnown RBP RIP-Chip data-2.26□□□□□ -2.77not detected
snR40snR40 YOR062CP36025 268 aa-2.26□□□□□ -2.77
snR40snR40 SDS22P36047 338 aa-2.26□□□□□ -2.77
snR40snR40 LYS1P38998 373 aaRIP-Chip data-2.26□□□□□ -2.77not detected
snR40snR40 CIN4P39110 191 aa-2.26□□□□□ -2.77
snR40snR40 YEL067CP39978 195 aa-2.26□□□□□ -2.77
snR40snR40 SEC24P40482 926 aaKnown RBP-2.26□□□□□ -2.77
snR40snR40 ALK1P43633 760 aaKnown RBP-2.26□□□□□ -2.77
snR40snR40 COS6P53344 381 aa-2.26□□□□□ -2.77
snR40snR40 FRE4P53746 719 aa-2.26□□□□□ -2.77
snR40snR40 INA17Q02888 182 aa-2.26□□□□□ -2.77
snR40snR40 DPB4Q04603 196 aaKnown RBP-2.26□□□□□ -2.77
snR40snR40 YOL029CQ08187 201 aa-2.26□□□□□ -2.77
snR40snR40 STE2D6VTK4 431 aa-2.27□□□□□ -2.77
snR40snR40 COX11P19516 300 aaKnown RBP-2.27□□□□□ -2.77
snR40snR40 THI4P32318 326 aa-2.27□□□□□ -2.77
snR40snR40 TFB1P32776 642 aa-2.27□□□□□ -2.77
snR40snR40 YKR015CP36111 568 aa-2.27□□□□□ -2.77
snR40snR40 FSH1P38777 243 aaKnown RBP-2.27□□□□□ -2.77
snR40snR40 CTM1P38818 585 aa-2.27□□□□□ -2.77
snR40snR40 RPL10P41805 221 aaKnown RBP-2.27□□□□□ -2.77
snR40snR40 AIP1P46680 615 aaKnown RBP-2.27□□□□□ -2.77
snR40snR40 PET130P47065 347 aa-2.27□□□□□ -2.77
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms