RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B SMC5Q08204 1093 aa0.23□□□□□ -2.37
snR39BsnR39B RIM20Q12033 661 aa0.23□□□□□ -2.37
snR39BsnR39B RLM1Q12224 676 aa0.23□□□□□ -2.37
snR39BsnR39B NYV1Q12255 253 aa0.23□□□□□ -2.37
snR39BsnR39B CEX1Q12453 761 aa0.23□□□□□ -2.37
snR39BsnR39B ILV5P06168 395 aaKnown RBP0.22□□□□□ -2.37
snR39BsnR39B DBF20P32328 564 aa0.22□□□□□ -2.37
snR39BsnR39B RRP1P35178 278 aaPredicted RBP0.22□□□□□ -2.37
snR39BsnR39B AIP1P46680 615 aaKnown RBP0.22□□□□□ -2.37
snR39BsnR39B MNN5P46982 586 aa0.22□□□□□ -2.37
snR39BsnR39B SFH5P47008 294 aa0.22□□□□□ -2.37
snR39BsnR39B BET5Q03630 159 aa0.22□□□□□ -2.37
snR39BsnR39B YMR155WQ03795 547 aa0.22□□□□□ -2.37
snR39BsnR39B INP2Q03824 705 aa0.22□□□□□ -2.37
snR39BsnR39B MRX8Q05473 314 aa0.22□□□□□ -2.37
snR39BsnR39B LOT6Q07923 191 aa0.22□□□□□ -2.37
snR39BsnR39B REX4Q08237 289 aa0.22□□□□□ -2.37
snR39BsnR39B YPT6Q99260 215 aa0.22□□□□□ -2.37
snR39BsnR39B RHO2P06781 192 aa0.21□□□□□ -2.38
snR39BsnR39B RPL31BP0C2H9 113 aaKnown RBP0.21□□□□□ -2.38
snR39BsnR39B CKA2P19454 339 aa0.21□□□□□ -2.38
snR39BsnR39B PHA2P32452 334 aa0.21□□□□□ -2.38
snR39BsnR39B TFB1P32776 642 aa0.21□□□□□ -2.38
snR39BsnR39B SKT5P34226 696 aa0.21□□□□□ -2.38
snR39BsnR39B TFG2P41896 400 aaPredicted RBP0.21□□□□□ -2.38
snR39BsnR39B AIM24P47127 394 aa0.21□□□□□ -2.38
snR39BsnR39B YGL108CP53139 140 aa0.21□□□□□ -2.38
snR39BsnR39B RMD9P53140 646 aaKnown RBP0.21□□□□□ -2.38
snR39BsnR39B NGL3Q03210 505 aa0.21□□□□□ -2.38
snR39BsnR39B YDR387CQ04162 555 aa0.21□□□□□ -2.38
snR39BsnR39B TAP42Q04372 366 aa0.21□□□□□ -2.38
snR39BsnR39B HSP31Q04432 237 aa0.21□□□□□ -2.38
snR39BsnR39B CLN1P20437 546 aa0.2□□□□□ -2.38
snR39BsnR39B MSP1P28737 362 aa0.2□□□□□ -2.38
snR39BsnR39B PRP21P32524 280 aaPredicted RBP0.2□□□□□ -2.38
snR39BsnR39B ALK2P32789 676 aaPredicted RBP0.2□□□□□ -2.38
snR39BsnR39B TKL2P33315 681 aa0.2□□□□□ -2.38
snR39BsnR39B WBP1P33767 430 aaKnown RBP0.2□□□□□ -2.38
snR39BsnR39B PSY4P38193 441 aa0.2□□□□□ -2.38
snR39BsnR39B YBL029WP38201 376 aa0.2□□□□□ -2.38
snR39BsnR39B DPH1P40487 425 aaKnown RBP0.2□□□□□ -2.38
snR39BsnR39B VMA13P41807 478 aaKnown RBP0.2□□□□□ -2.38
snR39BsnR39B MRM2P53123 320 aa0.2□□□□□ -2.38
snR39BsnR39B YEH1Q07804 573 aa0.2□□□□□ -2.38
snR39BsnR39B LDS2Q08218 356 aa0.2□□□□□ -2.38
snR39BsnR39B DDC1Q08949 612 aa0.2□□□□□ -2.38
snR39BsnR39B VPS54Q12071 889 aa0.2□□□□□ -2.38
snR39BsnR39B LDB17Q12342 491 aa0.2□□□□□ -2.38
snR39BsnR39B SKM1Q12469 655 aa0.2□□□□□ -2.38
snR39BsnR39B SEC63P14906 663 aa0.19□□□□□ -2.38
snR39BsnR39B FUS3P16892 353 aaKnown RBP0.19□□□□□ -2.38
snR39BsnR39B SPO12P17123 173 aa0.19□□□□□ -2.38
snR39BsnR39B CTR86P25355 563 aa0.19□□□□□ -2.38
snR39BsnR39B SIN4P32259 974 aa0.19□□□□□ -2.38
snR39BsnR39B SLC1P33333 303 aa0.19□□□□□ -2.38
snR39BsnR39B FRM2P37261 193 aa0.19□□□□□ -2.38
snR39BsnR39B SOL2P37262 315 aa0.19□□□□□ -2.38
snR39BsnR39B YBL081WP38180 368 aaKnown RBP0.19□□□□□ -2.38
snR39BsnR39B YHK8P38776 514 aa0.19□□□□□ -2.38
snR39BsnR39B YHR054CP38780 354 aa0.19□□□□□ -2.38
snR39BsnR39B KAP123P40069 1113 aaKnown RBP0.19□□□□□ -2.38
snR39BsnR39B YJR008WP47085 338 aa0.19□□□□□ -2.38
snR39BsnR39B GTR1Q00582 310 aa0.19□□□□□ -2.38
snR39BsnR39B MDM36Q06820 579 aa0.19□□□□□ -2.38
snR39BsnR39B SKI7Q08491 747 aaPredicted RBP0.19□□□□□ -2.38
snR39BsnR39B FRE8Q12209 686 aa0.19□□□□□ -2.38
snR39BsnR39B EAF3Q12432 401 aa0.19□□□□□ -2.38
snR39BsnR39B AVL9Q12500 764 aa0.19□□□□□ -2.38
snR39BsnR39B YDL007C-AQ2V2Q0 85 aa0.19□□□□□ -2.38
snR39BsnR39B SSM4P40318 1319 aa0.18□□□□□ -2.38
snR39BsnR39B YLR278CQ05854 1341 aa0.18□□□□□ -2.38
snR39BsnR39B PIS1P06197 220 aaKnown RBP0.18□□□□□ -2.38
snR39BsnR39B FUM1P08417 488 aaKnown RBP0.18□□□□□ -2.38
snR39BsnR39B DPH5P32469 300 aaPredicted RBP0.18□□□□□ -2.38
snR39BsnR39B YKR032WP36127 104 aa0.18□□□□□ -2.38
snR39BsnR39B SAS2P40963 338 aa0.18□□□□□ -2.38
snR39BsnR39B HMS2P47175 358 aa0.18□□□□□ -2.38
snR39BsnR39B SEH1P53011 349 aaKnown RBP0.18□□□□□ -2.38
snR39BsnR39B VEL1P53058 206 aa0.18□□□□□ -2.38
snR39BsnR39B YGL088WP53151 121 aa0.18□□□□□ -2.38
snR39BsnR39B COS1P53822 381 aa0.18□□□□□ -2.38
snR39BsnR39B UBX4P54730 416 aa0.18□□□□□ -2.38
snR39BsnR39B TDA1Q03533 586 aa0.18□□□□□ -2.38
snR39BsnR39B MIX17Q03667 156 aa0.18□□□□□ -2.38
snR39BsnR39B PRM6Q04705 352 aa0.18□□□□□ -2.38
snR39BsnR39B RAX1Q08760 435 aa0.18□□□□□ -2.38
snR39BsnR39B TPT1Q12272 230 aaKnown RBP0.18□□□□□ -2.38
snR39BsnR39B HTZ1Q12692 134 aaKnown RBP0.18□□□□□ -2.38
snR39BsnR39B AUS1Q08409 1394 aa0.18□□□□□ -2.38
snR39BsnR39B EPT1P22140 391 aa0.17□□□□□ -2.38
snR39BsnR39B CHS3P29465 1165 aa0.17□□□□□ -2.38
snR39BsnR39B MRE11P32829 692 aa0.17□□□□□ -2.38
snR39BsnR39B PDC2P32896 925 aa0.17□□□□□ -2.38
snR39BsnR39B NIP100P33420 868 aa0.17□□□□□ -2.38
snR39BsnR39B SMP1P38128 452 aa0.17□□□□□ -2.38
snR39BsnR39B ESL1P40456 1118 aa0.17□□□□□ -2.38
snR39BsnR39B LCB3P47013 409 aa0.17□□□□□ -2.38
snR39BsnR39B YIF1P53845 314 aaKnown RBP0.17□□□□□ -2.38
snR39BsnR39B GAL80P04387 435 aa0.16□□□□□ -2.38
snR39BsnR39B RPS23AP0CX29 145 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms