RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W ORT1Q12375 292 aa1.57□□□□□ -2.16
YOP1YPR028W MDH1P17505 334 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
YOP1YPR028W PET123P17558 318 aa1.56□□□□□ -2.16
YOP1YPR028W CLN1P20437 546 aa1.56□□□□□ -2.16
YOP1YPR028W CPR2P23285 205 aa1.56□□□□□ -2.16
YOP1YPR028W PCL1P24867 279 aa1.56□□□□□ -2.16
YOP1YPR028W CTR86P25355 563 aa1.56□□□□□ -2.16
YOP1YPR028W ERV1P27882 189 aa1.56□□□□□ -2.16
YOP1YPR028W PXA2P34230 853 aa1.56□□□□□ -2.16
YOP1YPR028W KKQ8P36004 724 aa1.56□□□□□ -2.16
YOP1YPR028W MID2P36027 376 aa1.56□□□□□ -2.16
YOP1YPR028W RRN10P38204 145 aa1.56□□□□□ -2.16
YOP1YPR028W SLM4P38247 162 aa1.56□□□□□ -2.16
YOP1YPR028W SRP72P38688 640 aaKnown RBP1.56□□□□□ -2.16
YOP1YPR028W PCF11P39081 626 aaPredicted RBP1.56□□□□□ -2.16
YOP1YPR028W YAL037WP39728 267 aa1.56□□□□□ -2.16
YOP1YPR028W ZIM17P42844 174 aa1.56□□□□□ -2.16
YOP1YPR028W NCA3P46955 337 aa1.56□□□□□ -2.16
YOP1YPR028W PHO86P46956 311 aa1.56□□□□□ -2.16
YOP1YPR028W GPI15P53961 229 aa1.56□□□□□ -2.16
YOP1YPR028W GIP3Q03016 1276 aa1.56□□□□□ -2.16
YOP1YPR028W PPM1Q04081 328 aa1.56□□□□□ -2.16
YOP1YPR028W TSA2Q04120 196 aa1.56□□□□□ -2.16
YOP1YPR028W YLR345WQ06137 509 aa1.56□□□□□ -2.16
YOP1YPR028W MMR1Q06324 491 aa1.56□□□□□ -2.16
YOP1YPR028W VPS54Q12071 889 aa1.56□□□□□ -2.16
YOP1YPR028W SMC6Q12749 1114 aa1.56□□□□□ -2.16
YOP1YPR028W MTR10Q99189 972 aa1.56□□□□□ -2.16
YOP1YPR028W TY1B-AO13527 1196 aaKnown RBP1.55□□□□□ -2.16
YOP1YPR028W ADE4P04046 510 aaKnown RBP1.55□□□□□ -2.16
YOP1YPR028W CYC3P06182 269 aa1.55□□□□□ -2.16
YOP1YPR028W NFT1P0CE68 1218 aa1.55□□□□□ -2.16
YOP1YPR028W HOM3P10869 527 aa1.55□□□□□ -2.16
YOP1YPR028W SLY1P22213 666 aa1.55□□□□□ -2.16
YOP1YPR028W MRP21P38175 177 aa1.55□□□□□ -2.16
YOP1YPR028W TCB2P48231 1178 aa1.55□□□□□ -2.16
YOP1YPR028W YML6P51998 286 aa1.55□□□□□ -2.16
YOP1YPR028W HER2Q03557 464 aa1.55□□□□□ -2.16
YOP1YPR028W AIM32Q04689 311 aa1.55□□□□□ -2.16
YOP1YPR028W SNX3Q08826 162 aaKnown RBP1.55□□□□□ -2.16
YOP1YPR028W AEP3Q12089 606 aa1.55□□□□□ -2.16
YOP1YPR028W ATG34Q12292 412 aa1.55□□□□□ -2.16
YOP1YPR028W RMD5Q12508 421 aa1.55□□□□□ -2.16
YOP1YPR028W ILV5P06168 395 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W SPO12P17123 173 aa1.54□□□□□ -2.16
YOP1YPR028W RAD57P25301 460 aa1.54□□□□□ -2.16
YOP1YPR028W DAL2P25335 343 aa1.54□□□□□ -2.16
YOP1YPR028W NIP1P32497 812 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W KAR9P32526 644 aa1.54□□□□□ -2.16
YOP1YPR028W MUD1P32605 298 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W VMA8P32610 256 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W MNS1P32906 549 aa1.54□□□□□ -2.16
YOP1YPR028W LTV1P34078 463 aa1.54□□□□□ -2.16
YOP1YPR028W YBR056WP38081 501 aa1.54□□□□□ -2.16
YOP1YPR028W RRP4P38792 359 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W VHS2P40463 436 aa1.54□□□□□ -2.16
YOP1YPR028W BUD27P43573 796 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
YOP1YPR028W BRO1P48582 844 aa1.54□□□□□ -2.16
YOP1YPR028W TOM22P49334 152 aa1.54□□□□□ -2.16
YOP1YPR028W AZR1P50080 613 aa1.54□□□□□ -2.16
YOP1YPR028W PHB2P50085 310 aa1.54□□□□□ -2.16
YOP1YPR028W YGR111WP53265 400 aa1.54□□□□□ -2.16
YOP1YPR028W CWC25P53854 179 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W OCA2P53949 197 aa1.54□□□□□ -2.16
YOP1YPR028W VPS9P54787 451 aa1.54□□□□□ -2.16
YOP1YPR028W CIK1Q01649 594 aa1.54□□□□□ -2.16
YOP1YPR028W OAZ1Q02803 292 aa1.54□□□□□ -2.16
YOP1YPR028W URH1Q04179 340 aa1.54□□□□□ -2.16
YOP1YPR028W SRL2Q12020 392 aa1.54□□□□□ -2.16
YOP1YPR028W RUP1Q12242 671 aa1.54□□□□□ -2.16
YOP1YPR028W WTM1Q12363 437 aaKnown RBP1.54□□□□□ -2.16
YOP1YPR028W ERP4Q12450 207 aa1.54□□□□□ -2.16
YOP1YPR028W TRP1P00912 224 aa1.53□□□□□ -2.16
YOP1YPR028W ASC1P38011 319 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W ATP3P38077 311 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W OLA1P38219 394 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W ZTA1P38230 334 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W SER3P40054 469 aa1.53□□□□□ -2.16
YOP1YPR028W GAT2P40209 560 aa1.53□□□□□ -2.16
YOP1YPR028W SFH5P47008 294 aa1.53□□□□□ -2.16
YOP1YPR028W RHO5P53879 331 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W PRP42Q03776 544 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W RPN9Q04062 393 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W SXM1Q04175 944 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W BCH1Q05029 724 aa1.53□□□□□ -2.16
YOP1YPR028W RRP9Q06506 573 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W NDE2Q07500 545 aa1.53□□□□□ -2.16
YOP1YPR028W DCI1Q08558 271 aa1.53□□□□□ -2.16
YOP1YPR028W TPT1Q12272 230 aaKnown RBP1.53□□□□□ -2.16
YOP1YPR028W SNU66Q12420 587 aaPredicted RBP1.53□□□□□ -2.16
YOP1YPR028W COX3P00420 269 aa1.52□□□□□ -2.17
YOP1YPR028W ARO3P14843 370 aaKnown RBP1.52□□□□□ -2.17
YOP1YPR028W HSP104P31539 908 aaKnown RBP1.52□□□□□ -2.17
YOP1YPR028W CYS4P32582 507 aaKnown RBP1.52□□□□□ -2.17
YOP1YPR028W PEX5P35056 612 aa1.52□□□□□ -2.17
YOP1YPR028W RRP1P35178 278 aaPredicted RBP1.52□□□□□ -2.17
YOP1YPR028W STN1P38960 494 aa1.52□□□□□ -2.17
YOP1YPR028W JLP2P40206 208 aa1.52□□□□□ -2.17
YOP1YPR028W YPS6P40583 537 aa1.52□□□□□ -2.17
YOP1YPR028W PIB2P53191 635 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms