RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C BYE1P36106 594 aa3.31□□□□□ -1.88
SMD3YLR147C RRP4P38792 359 aaKnown RBP3.31□□□□□ -1.88
SMD3YLR147C YHR131CP38835 850 aa3.31□□□□□ -1.88
SMD3YLR147C VPS72Q03388 795 aa3.31□□□□□ -1.88
SMD3YLR147C YDR131CQ03899 556 aa3.31□□□□□ -1.88
SMD3YLR147C SNT309Q06091 175 aaPredicted RBP3.31□□□□□ -1.88
SMD3YLR147C IRC25Q07951 179 aa3.31□□□□□ -1.88
SMD3YLR147C COX3P00420 269 aa3.3□□□□□ -1.88
SMD3YLR147C FUR1P18562 216 aaKnown RBP3.3□□□□□ -1.88
SMD3YLR147C REC107P21651 314 aa3.3□□□□□ -1.88
SMD3YLR147C ADK2P26364 225 aa3.3□□□□□ -1.88
SMD3YLR147C JNM1P36224 373 aa3.3□□□□□ -1.88
SMD3YLR147C MRPL10P36520 322 aa3.3□□□□□ -1.88
SMD3YLR147C RRN10P38204 145 aa3.3□□□□□ -1.88
SMD3YLR147C SFH5P47008 294 aa3.3□□□□□ -1.88
SMD3YLR147C YJR085CP47131 105 aaKnown RBP3.3□□□□□ -1.88
SMD3YLR147C BUG1Q12191 341 aa3.3□□□□□ -1.88
SMD3YLR147C AHC1Q12433 566 aa3.3□□□□□ -1.88
SMD3YLR147C TY1B-AO13527 1196 aaKnown RBP3.29□□□□□ -1.88
SMD3YLR147C URA4P20051 364 aa3.29□□□□□ -1.88
SMD3YLR147C CLN1P20437 546 aa3.29□□□□□ -1.88
SMD3YLR147C URA7P28274 579 aaKnown RBP3.29□□□□□ -1.88
SMD3YLR147C UTH1P36135 365 aa3.29□□□□□ -1.88
SMD3YLR147C NOC2P39744 710 aaKnown RBP3.29□□□□□ -1.88
SMD3YLR147C MDE1P47095 244 aa3.29□□□□□ -1.88
SMD3YLR147C ACL4Q03771 387 aa3.29□□□□□ -1.88
SMD3YLR147C URH1Q04179 340 aa3.29□□□□□ -1.88
SMD3YLR147C ATG34Q12292 412 aa3.29□□□□□ -1.88
SMD3YLR147C AFI1Q99222 893 aa3.29□□□□□ -1.88
SMD3YLR147C NAT1P12945 854 aaKnown RBP3.28□□□□□ -1.88
SMD3YLR147C PCL1P24867 279 aa3.28□□□□□ -1.88
SMD3YLR147C ERV1P27882 189 aa3.28□□□□□ -1.88
SMD3YLR147C BRF1P29056 596 aa3.28□□□□□ -1.88
SMD3YLR147C MMS4P38257 691 aa3.28□□□□□ -1.88
SMD3YLR147C SBE22P38814 852 aa3.28□□□□□ -1.88
SMD3YLR147C GAB1P41733 394 aa3.28□□□□□ -1.88
SMD3YLR147C RPT4P53549 437 aaKnown RBP3.28□□□□□ -1.88
SMD3YLR147C DCS1Q06151 350 aa3.28□□□□□ -1.88
SMD3YLR147C MMR1Q06324 491 aa3.28□□□□□ -1.88
SMD3YLR147C PLP2Q12017 286 aa3.28□□□□□ -1.88
SMD3YLR147C ADE4P04046 510 aaKnown RBP3.27□□□□□ -1.89
SMD3YLR147C IMA3P0CW40 589 aa3.27□□□□□ -1.89
SMD3YLR147C IMA4P0CW41 589 aa3.27□□□□□ -1.89
SMD3YLR147C NUP2P32499 720 aa3.27□□□□□ -1.89
SMD3YLR147C YPS6P40583 537 aa3.27□□□□□ -1.89
SMD3YLR147C OCA2P53949 197 aa3.27□□□□□ -1.89
SMD3YLR147C HAL1Q01766 294 aa3.27□□□□□ -1.89
SMD3YLR147C YMR130WQ04223 302 aa3.27□□□□□ -1.89
SMD3YLR147C IMA2Q08295 589 aa3.27□□□□□ -1.89
SMD3YLR147C CUE5Q08412 411 aaKnown RBP3.27□□□□□ -1.89
SMD3YLR147C TPT1Q12272 230 aaKnown RBP3.27□□□□□ -1.89
SMD3YLR147C PHA2P32452 334 aa3.26□□□□□ -1.89
SMD3YLR147C CHK1P38147 527 aa3.26□□□□□ -1.89
SMD3YLR147C AIM10P39965 576 aaKnown RBP3.26□□□□□ -1.89
SMD3YLR147C UTP18P40362 594 aaPredicted RBP3.26□□□□□ -1.89
SMD3YLR147C SIM1P40472 476 aa3.26□□□□□ -1.89
SMD3YLR147C TOM22P49334 152 aa3.26□□□□□ -1.89
SMD3YLR147C NUP116Q02630 1113 aa3.26□□□□□ -1.89
SMD3YLR147C RAX1Q08760 435 aa3.26□□□□□ -1.89
SMD3YLR147C SNU66Q12420 587 aaPredicted RBP3.26□□□□□ -1.89
SMD3YLR147C IZH2Q12442 317 aa3.26□□□□□ -1.89
SMD3YLR147C ARO3P14843 370 aaKnown RBP3.25□□□□□ -1.89
SMD3YLR147C PDX1P16451 410 aa3.25□□□□□ -1.89
SMD3YLR147C RPC53P25441 422 aa3.25□□□□□ -1.89
SMD3YLR147C YCL068CP25593 260 aa3.25□□□□□ -1.89
SMD3YLR147C RRP1P35178 278 aaPredicted RBP3.25□□□□□ -1.89
SMD3YLR147C SLM4P38247 162 aa3.25□□□□□ -1.89
SMD3YLR147C MTQ1P53944 314 aa3.25□□□□□ -1.89
SMD3YLR147C CCE1Q03702 353 aa3.25□□□□□ -1.89
SMD3YLR147C RRP9Q06506 573 aaKnown RBP3.25□□□□□ -1.89
SMD3YLR147C HSP26P15992 214 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SMD3YLR147C CAK1P43568 368 aaPredicted RBP3.24□□□□□ -1.89
SMD3YLR147C ERB1Q04660 807 aaKnown RBP3.24□□□□□ -1.89
SMD3YLR147C TFB1P32776 642 aa3.23□□□□□ -1.89
SMD3YLR147C MIG3P39943 394 aa3.23□□□□□ -1.89
SMD3YLR147C SER3P40054 469 aa3.23□□□□□ -1.89
SMD3YLR147C YIL029CP40538 142 aa3.23□□□□□ -1.89
SMD3YLR147C TCB2P48231 1178 aa3.23□□□□□ -1.89
SMD3YLR147C COS1P53822 381 aa3.23□□□□□ -1.89
SMD3YLR147C HOT1Q03213 719 aa3.23□□□□□ -1.89
SMD3YLR147C RPN9Q04062 393 aaKnown RBP3.23□□□□□ -1.89
SMD3YLR147C YLR345WQ06137 509 aa3.23□□□□□ -1.89
SMD3YLR147C HOM3P10869 527 aa3.22□□□□□ -1.89
SMD3YLR147C NAM2P11325 894 aa3.22□□□□□ -1.89
SMD3YLR147C MSI1P13712 422 aa3.22□□□□□ -1.89
SMD3YLR147C EXG1P23776 448 aaKnown RBP3.22□□□□□ -1.89
SMD3YLR147C CLB1P24868 471 aa3.22□□□□□ -1.89
SMD3YLR147C YBR056WP38081 501 aa3.22□□□□□ -1.89
SMD3YLR147C MRP21P38175 177 aa3.22□□□□□ -1.89
SMD3YLR147C GAT2P40209 560 aa3.22□□□□□ -1.89
SMD3YLR147C CHS6P40955 746 aa3.22□□□□□ -1.89
SMD3YLR147C MRM2P53123 320 aa3.22□□□□□ -1.89
SMD3YLR147C ADA2Q02336 434 aa3.22□□□□□ -1.89
SMD3YLR147C STD1Q02794 444 aa3.22□□□□□ -1.89
SMD3YLR147C MED2Q12124 431 aa3.22□□□□□ -1.89
SMD3YLR147C MTR10Q99189 972 aa3.22□□□□□ -1.89
SMD3YLR147C HEL1P36113 551 aa3.21□□□□□ -1.9
SMD3YLR147C ASC1P38011 319 aaKnown RBP3.21□□□□□ -1.9
SMD3YLR147C COX14P39103 70 aa3.21□□□□□ -1.9
SMD3YLR147C VHS2P40463 436 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms