RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C EMP65P40085 556 aa10.58□□□□□ -0.72
SPT8YLR055C YNL143CP53908 130 aa10.58□□□□□ -0.72
SPT8YLR055C RAX1Q08760 435 aa10.58□□□□□ -0.72
SPT8YLR055C GTT2Q12390 233 aa10.58□□□□□ -0.72
SPT8YLR055C SIS1P25294 352 aaKnown RBP10.57□□□□□ -0.72
SPT8YLR055C HCM1P25364 564 aa10.57□□□□□ -0.72
SPT8YLR055C RPC34P32910 317 aa10.57□□□□□ -0.72
SPT8YLR055C IRS4P36115 615 aaKnown RBP10.57□□□□□ -0.72
SPT8YLR055C ARA1P38115 344 aa10.57□□□□□ -0.72
SPT8YLR055C COS111P38308 924 aa10.57□□□□□ -0.72
SPT8YLR055C MEP1P40260 492 aa10.57□□□□□ -0.72
SPT8YLR055C IME4P41833 600 aa10.57□□□□□ -0.72
SPT8YLR055C SCW11P53189 542 aa10.57□□□□□ -0.72
SPT8YLR055C IGO1P53897 168 aa10.57□□□□□ -0.72
SPT8YLR055C MPS1P54199 764 aa10.57□□□□□ -0.72
SPT8YLR055C YAT1P80235 687 aa10.57□□□□□ -0.72
SPT8YLR055C YDR056CQ12025 205 aa10.57□□□□□ -0.72
SPT8YLR055C YOR338WQ99326 363 aa10.57□□□□□ -0.72
SPT8YLR055C CDC21P06785 304 aa10.56□□□□□ -0.72
SPT8YLR055C SAM35P14693 329 aa10.56□□□□□ -0.72
SPT8YLR055C BAP2P38084 609 aa10.56□□□□□ -0.72
SPT8YLR055C RPL34BP40525 121 aaKnown RBP10.56□□□□□ -0.72
SPT8YLR055C YGR266WP53326 701 aa10.56□□□□□ -0.72
SPT8YLR055C CWC24P53769 259 aa10.56□□□□□ -0.72
SPT8YLR055C NIS1P53939 407 aa10.56□□□□□ -0.72
SPT8YLR055C AQR1P53943 586 aa10.56□□□□□ -0.72
SPT8YLR055C RPC11Q04307 110 aaPredicted RBP10.56□□□□□ -0.72
SPT8YLR055C RTR2Q12378 196 aa10.56□□□□□ -0.72
SPT8YLR055C YCL012CQ8J0M4 134 aa10.56□□□□□ -0.72
SPT8YLR055C SIR3P06701 978 aa10.56□□□□□ -0.72
SPT8YLR055C PDE2P06776 526 aa10.56□□□□□ -0.72
SPT8YLR055C MDH1P17505 334 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
SPT8YLR055C RMA1P36001 430 aaKnown RBP10.56□□□□□ -0.72
SPT8YLR055C SER3P40054 469 aa10.56□□□□□ -0.72
SPT8YLR055C GAT1P43574 510 aa10.56□□□□□ -0.72
SPT8YLR055C RQC1Q05468 723 aaKnown RBP10.56□□□□□ -0.72
SPT8YLR055C YDR061WQ12298 539 aa10.56□□□□□ -0.72
SPT8YLR055C MHT1Q12525 324 aa10.56□□□□□ -0.72
SPT8YLR055C DIT1P21623 536 aa10.55□□□□□ -0.72
SPT8YLR055C RER1P25560 188 aa10.55□□□□□ -0.72
SPT8YLR055C TOD6P34219 525 aa10.55□□□□□ -0.72
SPT8YLR055C GLY1P37303 387 aaKnown RBP10.55□□□□□ -0.72
SPT8YLR055C AIM22P47051 409 aa10.55□□□□□ -0.72
SPT8YLR055C BSC2Q05611 235 aa10.55□□□□□ -0.72
SPT8YLR055C RGC1Q06108 1083 aaKnown RBP10.55□□□□□ -0.72
SPT8YLR055C HAL9Q12180 1030 aa10.55□□□□□ -0.72
SPT8YLR055C FMP16Q12497 93 aa10.55□□□□□ -0.72
SPT8YLR055C SGV1P23293 657 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C ATG22P25568 528 aa10.54□□□□□ -0.72
SPT8YLR055C GSH1P32477 678 aa10.54□□□□□ -0.72
SPT8YLR055C PMT1P33775 817 aa10.54□□□□□ -0.72
SPT8YLR055C TIP20P33891 701 aa10.54□□□□□ -0.72
SPT8YLR055C PHO11P35842 467 aa10.54□□□□□ -0.72
SPT8YLR055C YBR242WP38331 238 aa10.54□□□□□ -0.72
SPT8YLR055C PHO12P38693 467 aa10.54□□□□□ -0.72
SPT8YLR055C NTA1P40354 457 aa10.54□□□□□ -0.72
SPT8YLR055C SSU1P41930 458 aa10.54□□□□□ -0.72
SPT8YLR055C BIT61P47041 543 aa10.54□□□□□ -0.72
SPT8YLR055C RBG2P53295 368 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C YPL071CQ02864 156 aa10.54□□□□□ -0.72
SPT8YLR055C NGL2Q03264 515 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C RRT8Q08219 342 aa10.54□□□□□ -0.72
SPT8YLR055C NBA1Q08229 501 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C TSC13Q99190 310 aa10.54□□□□□ -0.72
SPT8YLR055C MET8P15807 274 aa10.54□□□□□ -0.72
SPT8YLR055C YJU2P28320 278 aaPredicted RBP10.54□□□□□ -0.72
SPT8YLR055C TCD2P36101 447 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C HXT6P39003 570 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C HXT7P39004 570 aa10.54□□□□□ -0.72
SPT8YLR055C RPH1P39956 796 aa10.54□□□□□ -0.72
SPT8YLR055C RRG9P40156 214 aa10.54□□□□□ -0.72
SPT8YLR055C LEM3P42838 414 aa10.54□□□□□ -0.72
SPT8YLR055C YGR210CP42942 411 aa10.54□□□□□ -0.72
SPT8YLR055C MNN5P46982 586 aa10.54□□□□□ -0.72
SPT8YLR055C SNX4P47057 423 aa10.54□□□□□ -0.72
SPT8YLR055C JHD2P47156 728 aaPredicted RBP10.54□□□□□ -0.72
SPT8YLR055C ISU1Q03020 165 aa10.54□□□□□ -0.72
SPT8YLR055C HPF1Q05164 967 aa10.54□□□□□ -0.72
SPT8YLR055C TGL5Q12043 749 aa10.54□□□□□ -0.72
SPT8YLR055C YPL245WQ12179 454 aaKnown RBP10.54□□□□□ -0.72
SPT8YLR055C SIA1Q12212 622 aa10.54□□□□□ -0.72
SPT8YLR055C LSO1Q3E827 93 aa10.54□□□□□ -0.72
SPT8YLR055C THI4P32318 326 aa10.53□□□□□ -0.72
SPT8YLR055C UBA4P38820 440 aa10.53□□□□□ -0.72
SPT8YLR055C GDI1P39958 451 aaKnown RBP10.53□□□□□ -0.72
SPT8YLR055C IRC18P47056 224 aa10.53□□□□□ -0.72
SPT8YLR055C FRE4P53746 719 aa10.53□□□□□ -0.72
SPT8YLR055C CIA1Q05583 330 aa10.53□□□□□ -0.72
SPT8YLR055C OPI10Q08202 246 aa10.53□□□□□ -0.72
SPT8YLR055C PHO5P00635 467 aa10.52□□□□□ -0.73
SPT8YLR055C RPC40P07703 335 aaKnown RBP10.52□□□□□ -0.73
SPT8YLR055C NIC96P34077 839 aa10.52□□□□□ -0.73
SPT8YLR055C MLH1P38920 769 aa10.52□□□□□ -0.73
SPT8YLR055C CCT6P39079 546 aa10.52□□□□□ -0.73
SPT8YLR055C OPT2Q06593 877 aa10.52□□□□□ -0.73
SPT8YLR055C ATG31Q12421 196 aa10.52□□□□□ -0.73
SPT8YLR055C SUS1Q6WNK7 96 aa10.52□□□□□ -0.73
SPT8YLR055C KIN2P13186 1147 aaKnown RBP10.51□□□□□ -0.73
SPT8YLR055C TAH1P25638 111 aaPredicted RBP10.51□□□□□ -0.73
SPT8YLR055C PRP18P33411 251 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms