RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	SRL2	Q12020	392 aa		3.86	□□□□□ -1.79
EBP2	YKL172W	SPO12	P17123	173 aa		3.85	□□□□□ -1.79
EBP2	YKL172W	DAL2	P25335	343 aa		3.85	□□□□□ -1.79
EBP2	YKL172W	RFS1	P38234	210 aa	Known RBP	3.85	□□□□□ -1.79
EBP2	YKL172W	SFH5	P47008	294 aa		3.85	□□□□□ -1.79
EBP2	YKL172W	AZR1	P50080	613 aa		3.85	□□□□□ -1.79
EBP2	YKL172W	OAZ1	Q02803	292 aa		3.85	□□□□□ -1.79
EBP2	YKL172W	TPT1	Q12272	230 aa	Known RBP	3.85	□□□□□ -1.79
EBP2	YKL172W	PET123	P17558	318 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	ASC1	P38011	319 aa	Known RBP	3.84	□□□□□ -1.79
EBP2	YKL172W	GAT2	P40209	560 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	PHB2	P50085	310 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	RHO5	P53879	331 aa	Known RBP	3.84	□□□□□ -1.79
EBP2	YKL172W	MMT1	Q03218	510 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	PRP42	Q03776	544 aa	Known RBP	3.84	□□□□□ -1.79
EBP2	YKL172W	BCH1	Q05029	724 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	NDE2	Q07500	545 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	DCI1	Q08558	271 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	SNU66	Q12420	587 aa	Predicted RBP	3.84	□□□□□ -1.79
EBP2	YKL172W	ERP4	Q12450	207 aa		3.84	□□□□□ -1.79
EBP2	YKL172W	MNS1	P32906	549 aa		3.83	□□□□□ -1.8
EBP2	YKL172W	YOX1	P34161	385 aa		3.83	□□□□□ -1.8
EBP2	YKL172W	ZTA1	P38230	334 aa	Known RBP	3.83	□□□□□ -1.8
EBP2	YKL172W	YPS6	P40583	537 aa		3.83	□□□□□ -1.8
EBP2	YKL172W	BRO1	P48582	844 aa		3.83	□□□□□ -1.8
EBP2	YKL172W	CWC25	P53854	179 aa	Known RBP	3.83	□□□□□ -1.8
EBP2	YKL172W	SXM1	Q04175	944 aa	Known RBP	3.83	□□□□□ -1.8
EBP2	YKL172W	HRI1	Q05905	244 aa	Known RBP	3.83	□□□□□ -1.8
EBP2	YKL172W	RRP9	Q06506	573 aa	Known RBP	3.83	□□□□□ -1.8
EBP2	YKL172W	TMS1	Q12116	473 aa		3.83	□□□□□ -1.8
EBP2	YKL172W	CEX1	Q12453	761 aa		3.83	□□□□□ -1.8
EBP2	YKL172W	TRP1	P00912	224 aa		3.82	□□□□□ -1.8
EBP2	YKL172W	REV1	P12689	985 aa		3.82	□□□□□ -1.8
EBP2	YKL172W	HSP104	P31539	908 aa	Known RBP	3.82	□□□□□ -1.8
EBP2	YKL172W	PEX5	P35056	612 aa		3.82	□□□□□ -1.8
EBP2	YKL172W	RRP1	P35178	278 aa	Predicted RBP	3.82	□□□□□ -1.8
EBP2	YKL172W	ATP3	P38077	311 aa	Known RBP	3.82	□□□□□ -1.8
EBP2	YKL172W	YBR137W	P38276	179 aa		3.82	□□□□□ -1.8
EBP2	YKL172W	SDS24	P38314	527 aa		3.82	□□□□□ -1.8
EBP2	YKL172W	SER3	P40054	469 aa		3.82	□□□□□ -1.8
EBP2	YKL172W	PAL1	Q05518	499 aa	Known RBP	3.82	□□□□□ -1.8
EBP2	YKL172W	CYS4	P32582	507 aa	Known RBP	3.81	□□□□□ -1.8
EBP2	YKL172W	JLP2	P40206	208 aa		3.81	□□□□□ -1.8
EBP2	YKL172W	PAN6	P40459	309 aa		3.81	□□□□□ -1.8
EBP2	YKL172W	SDT1	P53078	280 aa		3.81	□□□□□ -1.8
EBP2	YKL172W	RAX1	Q08760	435 aa		3.81	□□□□□ -1.8
EBP2	YKL172W	RRG7	Q08774	242 aa	Predicted RBP	3.81	□□□□□ -1.8
EBP2	YKL172W	COX3	P00420	269 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	IMA3	P0CW40	589 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	IMA4	P0CW41	589 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	POP5	P28005	173 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	RIM1	P32445	135 aa	Known RBP	3.8	□□□□□ -1.8
EBP2	YKL172W	YEL045C	P32616	141 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	STN1	P38960	494 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	SHE10	P53075	577 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	MTM1	P53320	366 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	STD1	Q02794	444 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	PEX25	Q02969	394 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	YLR456W	Q06199	204 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	MRPL35	Q06678	367 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	IMA2	Q08295	589 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	UAF30	Q08747	228 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	GPM3	Q12326	303 aa		3.8	□□□□□ -1.8
EBP2	YKL172W	ARO3	P14843	370 aa	Known RBP	3.79	□□□□□ -1.8
EBP2	YKL172W	YCL068C	P25593	260 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	KAR9	P32526	644 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	HEL1	P36113	551 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	CHK1	P38147	527 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	FAD1	P38913	306 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	COX14	P39103	70 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	YER079W	P40052	210 aa	Known RBP	3.79	□□□□□ -1.8
EBP2	YKL172W	YJL055W	P47044	245 aa		3.79	□□□□□ -1.8
EBP2	YKL172W	YDR341C	Q05506	607 aa	Known RBP	3.79	□□□□□ -1.8
EBP2	YKL172W	PDE2	P06776	526 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	CDC21	P06785	304 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	DST1	P07273	309 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	NFT1	P0CE68	1218 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	ISY1	P21374	235 aa	Predicted RBP	3.78	□□□□□ -1.8
EBP2	YKL172W	CDC60	P26637	1090 aa	Known RBP	3.78	□□□□□ -1.8
EBP2	YKL172W	MSG5	P38590	489 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	PIB2	P53191	635 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	RSC1	P53236	928 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	MTQ1	P53944	314 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	GYL1	Q04322	720 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	SNT309	Q06091	175 aa	Predicted RBP	3.78	□□□□□ -1.8
EBP2	YKL172W	IRC25	Q07951	179 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	FDH1	Q08911	376 aa		3.78	□□□□□ -1.8
EBP2	YKL172W	SPE3	Q12074	293 aa	Known RBP	3.78	□□□□□ -1.8
EBP2	YKL172W	CYC3	P06182	269 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	RVS161	P25343	265 aa	Known RBP	3.77	□□□□□ -1.81
EBP2	YKL172W	LDB16	P25587	256 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	INM1	P38710	295 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	LRP1	P38801	184 aa	Known RBP	3.77	□□□□□ -1.81
EBP2	YKL172W	YIL029C	P40538	142 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	MDE1	P47095	244 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	ALF1	P53904	254 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	NSE1	Q07913	336 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	YRM1	Q12340	786 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	HRT3	Q12347	344 aa		3.77	□□□□□ -1.81
EBP2	YKL172W	RPS8A	P0CX39	200 aa	Known RBP	3.76	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms