RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEF1	YGR058W	RFT1	P38206	574 aa	Predicted RBP	3.23	□□□□□ -1.89
PEF1	YGR058W	RSM25	P40496	264 aa		3.23	□□□□□ -1.89
PEF1	YGR058W	OCA1	P50946	238 aa	Predicted RBP	3.23	□□□□□ -1.89
PEF1	YGR058W	RPT6	Q01939	405 aa	Known RBP	3.23	□□□□□ -1.89
PEF1	YGR058W	ODC1	Q03028	310 aa		3.23	□□□□□ -1.89
PEF1	YGR058W	YPL199C	Q08954	240 aa		3.23	□□□□□ -1.89
PEF1	YGR058W	YLR108C	Q12259	485 aa		3.23	□□□□□ -1.89
PEF1	YGR058W	DDP1	Q99321	188 aa	Known RBP	3.23	□□□□□ -1.89
PEF1	YGR058W	YLR278C	Q05854	1341 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	TUS1	Q06412	1307 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
PEF1	YGR058W	VPS1	P21576	704 aa	Known RBP	3.22	□□□□□ -1.89
PEF1	YGR058W	SDH3	P33421	198 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	PIM1	P36775	1133 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	NOP4	P37838	685 aa	Known RBP	3.22	□□□□□ -1.89
PEF1	YGR058W	MIX23	P38162	196 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	RXT2	P38255	430 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	PES4	P39684	611 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	OST1	P41543	476 aa	Known RBP	3.22	□□□□□ -1.89
PEF1	YGR058W	WWM1	P43582	211 aa	Known RBP	3.22	□□□□□ -1.89
PEF1	YGR058W	YGR117C	P53270	476 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	VPS75	P53853	264 aa		3.22	□□□□□ -1.89
PEF1	YGR058W	TRM44	Q02648	567 aa	Known RBP	3.22	□□□□□ -1.89
PEF1	YGR058W	HSP82	P02829	709 aa	Known RBP	3.21	□□□□□ -1.9
PEF1	YGR058W	YAR066W	P0CX18	203 aa		3.21	□□□□□ -1.9
PEF1	YGR058W	YHR214W	P0CX19	203 aa		3.21	□□□□□ -1.9
PEF1	YGR058W	YGL138C	P53122	345 aa		3.21	□□□□□ -1.9
PEF1	YGR058W	RSC1	P53236	928 aa		3.21	□□□□□ -1.9
PEF1	YGR058W	KTR5	P53966	522 aa	Predicted RBP	3.21	□□□□□ -1.9
PEF1	YGR058W	MDM1	Q01846	1127 aa		3.21	□□□□□ -1.9
PEF1	YGR058W	YDR341C	Q05506	607 aa	Known RBP	3.21	□□□□□ -1.9
PEF1	YGR058W	CEX1	Q12453	761 aa		3.21	□□□□□ -1.9
PEF1	YGR058W	RPL22A	P05749	121 aa	Known RBP	3.2	□□□□□ -1.9
PEF1	YGR058W	HPR1	P17629	752 aa	Known RBP	3.2	□□□□□ -1.9
PEF1	YGR058W	YBL028C	P38202	106 aa		3.2	□□□□□ -1.9
PEF1	YGR058W	CST26	P38226	397 aa		3.2	□□□□□ -1.9
PEF1	YGR058W	YEL057C	P39983	233 aa		3.2	□□□□□ -1.9
PEF1	YGR058W	CUE3	P53137	624 aa	Known RBP	3.2	□□□□□ -1.9
PEF1	YGR058W	YGL108C	P53139	140 aa		3.2	□□□□□ -1.9
PEF1	YGR058W	RET3	P53600	189 aa		3.2	□□□□□ -1.9
PEF1	YGR058W	PNG1	Q02890	363 aa		3.2	□□□□□ -1.9
PEF1	YGR058W	HRI1	Q05905	244 aa	Known RBP	3.2	□□□□□ -1.9
PEF1	YGR058W	ALG1	P16661	449 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	PET123	P17558	318 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	RVS161	P25343	265 aa	Known RBP	3.19	□□□□□ -1.9
PEF1	YGR058W	BMH1	P29311	267 aa	Known RBP	3.19	□□□□□ -1.9
PEF1	YGR058W	MPE1	P35728	441 aa	Known RBP	3.19	□□□□□ -1.9
PEF1	YGR058W	YKT6	P36015	200 aa	Known RBP	3.19	□□□□□ -1.9
PEF1	YGR058W	STB6	P36085	766 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	YCR041W	P37265	110 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	CBP4	P37267	147 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	PRM5	P40476	318 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	NCA3	P46955	337 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	MRP51	Q02950	344 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	SOV1	Q04748	898 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	MMR1	Q06324	491 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	SEC39	Q12745	709 aa		3.19	□□□□□ -1.9
PEF1	YGR058W	FKS1	P38631	1876 aa	Known RBP	3.18	□□□□□ -1.9
PEF1	YGR058W	FOB1	O13329	566 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	NAT1	P12945	854 aa	Known RBP	3.18	□□□□□ -1.9
PEF1	YGR058W	MRPL10	P36520	322 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	THI2	P38141	450 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	YBR225W	P38321	900 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	VPS45	P38932	577 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	PAN6	P40459	309 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	MET28	P40573	187 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	ARE2	P53629	642 aa	Known RBP	3.18	□□□□□ -1.9
PEF1	YGR058W	RTC4	P53850	401 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	YDR239C	Q03780	787 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	NBL1	Q3E7Y6	73 aa		3.18	□□□□□ -1.9
PEF1	YGR058W	THR4	P16120	514 aa	Known RBP	3.17	□□□□□ -1.9
PEF1	YGR058W	ATP10	P18496	279 aa		3.17	□□□□□ -1.9
PEF1	YGR058W	LSB1	P53281	241 aa		3.17	□□□□□ -1.9
PEF1	YGR058W	SVL3	Q03088	825 aa	Known RBP	3.17	□□□□□ -1.9
PEF1	YGR058W	SUE1	Q06524	206 aa		3.17	□□□□□ -1.9
PEF1	YGR058W	HIS4	P00815	799 aa	Known RBP	3.16	□□□□□ -1.9
PEF1	YGR058W	GCN4	P03069	281 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	SPS22	P25380	463 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	RIB5	P38145	238 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	PHO88	P38264	188 aa	Predicted RBP	3.16	□□□□□ -1.9
PEF1	YGR058W	MSG5	P38590	489 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	MST28	P39552	234 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	TMA108	P40462	946 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	FMS1	P50264	508 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	YIP1	P53039	248 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	PCP1	P53259	346 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	BNI5	P53890	448 aa	Known RBP	3.16	□□□□□ -1.9
PEF1	YGR058W	HXT11	P54862	567 aa		3.16	□□□□□ -1.9
PEF1	YGR058W	SMD2	Q06217	110 aa	Known RBP	3.16	□□□□□ -1.9
PEF1	YGR058W	RPS8A	P0CX39	200 aa	Known RBP	3.15	□□□□□ -1.91
PEF1	YGR058W	RPS8B	P0CX40	200 aa	Known RBP	3.15	□□□□□ -1.91
PEF1	YGR058W	MET8	P15807	274 aa		3.15	□□□□□ -1.91
PEF1	YGR058W	CKA2	P19454	339 aa		3.15	□□□□□ -1.91
PEF1	YGR058W	DAL2	P25335	343 aa		3.15	□□□□□ -1.91
PEF1	YGR058W	SAS3	P34218	831 aa		3.15	□□□□□ -1.91
PEF1	YGR058W	GAA1	P39012	614 aa		3.15	□□□□□ -1.91
PEF1	YGR058W	NOC2	P39744	710 aa	Known RBP	3.15	□□□□□ -1.91
PEF1	YGR058W	YIL089W	P40500	205 aa		3.15	□□□□□ -1.91
PEF1	YGR058W	TFG2	P41896	400 aa	Predicted RBP	3.15	□□□□□ -1.91
PEF1	YGR058W	LAM5	P43560	674 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms