RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	PFA5	Q03289	374 aa		3.99	□□□□□ -1.77
TPA1	YER049W	RPN9	Q04062	393 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	PPN1	Q04119	674 aa		3.99	□□□□□ -1.77
TPA1	YER049W	EMI1	Q04406	187 aa		3.99	□□□□□ -1.77
TPA1	YER049W	NEJ1	Q06148	342 aa		3.99	□□□□□ -1.77
TPA1	YER049W	BUD7	Q08754	746 aa		3.99	□□□□□ -1.77
TPA1	YER049W	SAM4	Q08985	325 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	HAL9	Q12180	1030 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YGK3	Q12222	375 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	HSP42	Q12329	375 aa		3.99	□□□□□ -1.77
TPA1	YER049W	GAL3	P13045	520 aa		3.98	□□□□□ -1.77
TPA1	YER049W	CHA1	P25379	360 aa	Known RBP	3.98	□□□□□ -1.77
TPA1	YER049W	SPT14	P32363	452 aa		3.98	□□□□□ -1.77
TPA1	YER049W	HIR2	P32480	875 aa		3.98	□□□□□ -1.77
TPA1	YER049W	IMP3	P32899	183 aa	Predicted RBP	3.98	□□□□□ -1.77
TPA1	YER049W	UTP30	P36144	274 aa	Known RBP	3.98	□□□□□ -1.77
TPA1	YER049W	KTR4	P38131	464 aa		3.98	□□□□□ -1.77
TPA1	YER049W	GPX2	P38143	162 aa		3.98	□□□□□ -1.77
TPA1	YER049W	YHL026C	P38740	315 aa		3.98	□□□□□ -1.77
TPA1	YER049W	YHK8	P38776	514 aa		3.98	□□□□□ -1.77
TPA1	YER049W	YHR078W	P38799	552 aa		3.98	□□□□□ -1.77
TPA1	YER049W	FET5	P43561	622 aa		3.98	□□□□□ -1.77
TPA1	YER049W	SPC105	P53148	917 aa		3.98	□□□□□ -1.77
TPA1	YER049W	SPC98	P53540	846 aa		3.98	□□□□□ -1.77
TPA1	YER049W	IGO1	P53897	168 aa		3.98	□□□□□ -1.77
TPA1	YER049W	RRN5	Q02983	363 aa		3.98	□□□□□ -1.77
TPA1	YER049W	FIN1	Q03898	291 aa		3.98	□□□□□ -1.77
TPA1	YER049W	MCP2	Q06567	569 aa		3.98	□□□□□ -1.77
TPA1	YER049W	SYO1	Q07395	620 aa		3.98	□□□□□ -1.77
TPA1	YER049W	UPC2	Q12151	913 aa		3.98	□□□□□ -1.77
TPA1	YER049W	RPN6	Q12377	434 aa		3.98	□□□□□ -1.77
TPA1	YER049W	DIF1	O13577	133 aa		3.97	□□□□□ -1.77
TPA1	YER049W	RSR1	P13856	272 aa		3.97	□□□□□ -1.77
TPA1	YER049W	MEI5	P32489	222 aa		3.97	□□□□□ -1.77
TPA1	YER049W	THI80	P35202	319 aa		3.97	□□□□□ -1.77
TPA1	YER049W	CTF13	P35203	478 aa		3.97	□□□□□ -1.77
TPA1	YER049W	GND1	P38720	489 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	EFM1	P38732	585 aa		3.97	□□□□□ -1.77
TPA1	YER049W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	RIP-Chip
TPA1	YER049W	PRE6	P40303	254 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	UTP18	P40362	594 aa	Predicted RBP	3.97	□□□□□ -1.77
TPA1	YER049W	MET12	P46151	657 aa		3.97	□□□□□ -1.77
TPA1	YER049W	BIT61	P47041	543 aa		3.97	□□□□□ -1.77
TPA1	YER049W	UBC9	P50623	157 aa	Predicted RBP	3.97	□□□□□ -1.77
TPA1	YER049W	FOL2	P51601	243 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	YGR168C	P53293	376 aa		3.97	□□□□□ -1.77
TPA1	YER049W	SNF12	P53628	566 aa		3.97	□□□□□ -1.77
TPA1	YER049W	YNL181W	P53878	407 aa		3.97	□□□□□ -1.77
TPA1	YER049W	RCR2	Q03446	210 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	YDR132C	Q03900	495 aa		3.97	□□□□□ -1.77
TPA1	YER049W	YLR345W	Q06137	509 aa		3.97	□□□□□ -1.77
TPA1	YER049W	DBP9	Q06218	594 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	VTA1	Q06263	330 aa		3.97	□□□□□ -1.77
TPA1	YER049W	YOL131W	Q08270	108 aa		3.97	□□□□□ -1.77
TPA1	YER049W	SMF3	Q12078	473 aa	Predicted RBP	3.97	□□□□□ -1.77
TPA1	YER049W	PNS1	Q12412	539 aa		3.97	□□□□□ -1.77
TPA1	YER049W	TIM9	O74700	87 aa		3.97	□□□□□ -1.77
TPA1	YER049W	DBF2	P22204	572 aa		3.97	□□□□□ -1.77
TPA1	YER049W	YCR016W	P25617	290 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	CRM1	P30822	1084 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	VPS21	P36017	210 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	DHH1	P39517	506 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	ISC1	P40015	477 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	SPO73	P40031	143 aa		3.97	□□□□□ -1.77
TPA1	YER049W	PCL6	P40038	420 aa		3.97	□□□□□ -1.77
TPA1	YER049W	RGI2	P40188	164 aa		3.97	□□□□□ -1.77
TPA1	YER049W	MEP1	P40260	492 aa		3.97	□□□□□ -1.77
TPA1	YER049W	MPM1	P40364	252 aa		3.97	□□□□□ -1.77
TPA1	YER049W	PAC11	P40960	533 aa		3.97	□□□□□ -1.77
TPA1	YER049W	BST1	P43571	1029 aa		3.97	□□□□□ -1.77
TPA1	YER049W	TIS11	P47977	285 aa		3.97	□□□□□ -1.77
TPA1	YER049W	YPT32	P51996	222 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	COP1	P53622	1201 aa	Known RBP	3.97	□□□□□ -1.77
TPA1	YER049W	REG1	Q00816	1014 aa		3.97	□□□□□ -1.77
TPA1	YER049W	GRX5	Q02784	150 aa		3.97	□□□□□ -1.77
TPA1	YER049W	PLB2	Q03674	706 aa		3.97	□□□□□ -1.77
TPA1	YER049W	YLL007C	Q07799	665 aa		3.97	□□□□□ -1.77
TPA1	YER049W	GSH2	Q08220	491 aa		3.97	□□□□□ -1.77
TPA1	YER049W	ACF2	Q12168	779 aa		3.97	□□□□□ -1.77
TPA1	YER049W	RBD2	Q12270	262 aa		3.97	□□□□□ -1.77
TPA1	YER049W	UBR1	P19812	1950 aa		3.96	□□□□□ -1.77
TPA1	YER049W	RAS2	P01120	322 aa	Known RBP	3.96	□□□□□ -1.78
TPA1	YER049W	RPL24B	P24000	155 aa	Known RBP	3.96	□□□□□ -1.78
TPA1	YER049W	GRR1	P24814	1151 aa		3.96	□□□□□ -1.78
TPA1	YER049W	PPQ1	P32945	549 aa		3.96	□□□□□ -1.78
TPA1	YER049W	YKR051W	P36142	418 aa		3.96	□□□□□ -1.78
TPA1	YER049W	LDB7	P38210	180 aa		3.96	□□□□□ -1.78
TPA1	YER049W	MNN9	P39107	395 aa	Known RBP	3.96	□□□□□ -1.78
TPA1	YER049W	COG3	P40094	801 aa		3.96	□□□□□ -1.78
TPA1	YER049W	YIL108W	P40483	696 aa	Known RBP	3.96	□□□□□ -1.78
TPA1	YER049W	GCV2	P49095	1034 aa		3.96	□□□□□ -1.78
TPA1	YER049W	DIE2	P50076	525 aa		3.96	□□□□□ -1.78
TPA1	YER049W	DUS1	P53759	423 aa	Known RBP	3.96	□□□□□ -1.78
TPA1	YER049W	IDP3	P53982	420 aa	Known RBP	3.96	□□□□□ -1.78
TPA1	YER049W	NUP49	Q02199	472 aa		3.96	□□□□□ -1.78
TPA1	YER049W	IRC15	Q02733	499 aa		3.96	□□□□□ -1.78
TPA1	YER049W	CRR1	Q05790	422 aa		3.96	□□□□□ -1.78
TPA1	YER049W	ECM22	Q05958	814 aa	Predicted RBP	3.96	□□□□□ -1.78
TPA1	YER049W	GRS2	Q06817	618 aa		3.96	□□□□□ -1.78
TPA1	YER049W	BAG7	Q12128	409 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms