RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W RPF2P36160 344 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W MNN2P38069 597 aa5.31□□□□□ -1.56
FOB1YDR110W MIP6P38760 659 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W BIG1P38813 335 aa5.31□□□□□ -1.56
FOB1YDR110W CCT4P39078 528 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W PRP39P39682 629 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W VAB2P40003 282 aa5.31□□□□□ -1.56
FOB1YDR110W VHS2P40463 436 aa5.31□□□□□ -1.56
FOB1YDR110W PCI8P40512 444 aa5.31□□□□□ -1.56
FOB1YDR110W GTS1P40956 396 aa5.31□□□□□ -1.56
FOB1YDR110W IDS2P46958 469 aa5.31□□□□□ -1.56
FOB1YDR110W COS5P47187 383 aa5.31□□□□□ -1.56
FOB1YDR110W SRT1Q03175 343 aa5.31□□□□□ -1.56
FOB1YDR110W MMT1Q03218 510 aa5.31□□□□□ -1.56
FOB1YDR110W EBS1Q03466 884 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W EMI2Q04409 500 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W NDE2Q07500 545 aa5.31□□□□□ -1.56
FOB1YDR110W CSM4Q08955 156 aa5.31□□□□□ -1.56
FOB1YDR110W GPM2Q12008 311 aa5.31□□□□□ -1.56
FOB1YDR110W THP2O13539 261 aaKnown RBP5.3□□□□□ -1.56
FOB1YDR110W CAR1P00812 333 aaKnown RBP5.3□□□□□ -1.56
FOB1YDR110W CBS2P14905 389 aa5.3□□□□□ -1.56
FOB1YDR110W PDA1P16387 420 aaKnown RBP5.3□□□□□ -1.56
FOB1YDR110W RFA1P22336 621 aaKnown RBP5.3□□□□□ -1.56
FOB1YDR110W YSR3P23501 404 aa5.3□□□□□ -1.56
FOB1YDR110W RBK1P25332 333 aa5.3□□□□□ -1.56
FOB1YDR110W CTR86P25355 563 aa5.3□□□□□ -1.56
FOB1YDR110W LOS1P33418 1100 aaPredicted RBP5.3□□□□□ -1.56
FOB1YDR110W CPR5P35176 225 aa5.3□□□□□ -1.56
FOB1YDR110W YPK3P38070 525 aa5.3□□□□□ -1.56
FOB1YDR110W RPH1P39956 796 aa5.3□□□□□ -1.56
FOB1YDR110W ERG28P40030 148 aa5.3□□□□□ -1.56
FOB1YDR110W MDV1P47025 714 aa5.3□□□□□ -1.56
FOB1YDR110W CWC23P52868 283 aaPredicted RBP5.3□□□□□ -1.56
FOB1YDR110W YAT1P80235 687 aa5.3□□□□□ -1.56
FOB1YDR110W MSC2Q03455 724 aa5.3□□□□□ -1.56
FOB1YDR110W TAF12Q03761 539 aa5.3□□□□□ -1.56
FOB1YDR110W COS7Q07788 383 aa5.3□□□□□ -1.56
FOB1YDR110W YOL019WQ08157 551 aa5.3□□□□□ -1.56
FOB1YDR110W GAS5Q08193 484 aa5.3□□□□□ -1.56
FOB1YDR110W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
FOB1YDR110W BCK1Q01389 1478 aa5.3□□□□□ -1.56
FOB1YDR110W QCR2P07257 368 aa5.29□□□□□ -1.56
FOB1YDR110W STE18P18852 110 aa5.29□□□□□ -1.56
FOB1YDR110W RPL24BP24000 155 aaKnown RBP5.29□□□□□ -1.56
FOB1YDR110W YIM1P28625 365 aa5.29□□□□□ -1.56
FOB1YDR110W PRE2P30656 287 aaKnown RBP5.29□□□□□ -1.56
FOB1YDR110W YGL015CP33199 130 aa5.29□□□□□ -1.56
FOB1YDR110W RPC25P35718 212 aa5.29□□□□□ -1.56
FOB1YDR110W COS9P36034 407 aa5.29□□□□□ -1.56
FOB1YDR110W EHT1P38295 451 aa5.29□□□□□ -1.56
FOB1YDR110W MIC12P38341 106 aa5.29□□□□□ -1.56
FOB1YDR110W PTC7P38797 343 aa5.29□□□□□ -1.56
FOB1YDR110W YHR210CP38893 341 aa5.29□□□□□ -1.56
FOB1YDR110W MSS4P38994 779 aa5.29□□□□□ -1.56
FOB1YDR110W SNG1P46950 547 aa5.29□□□□□ -1.56
FOB1YDR110W ECL1P48235 211 aa5.29□□□□□ -1.56
FOB1YDR110W CLA4P48562 842 aa5.29□□□□□ -1.56
FOB1YDR110W RVB1Q03940 463 aaKnown RBP5.29□□□□□ -1.56
FOB1YDR110W KRE28Q04431 385 aa5.29□□□□□ -1.56
FOB1YDR110W YMR074CQ04773 145 aa5.29□□□□□ -1.56
FOB1YDR110W MRPL35Q06678 367 aa5.29□□□□□ -1.56
FOB1YDR110W VPS36Q06696 566 aa5.29□□□□□ -1.56
FOB1YDR110W NSE1Q07913 336 aa5.29□□□□□ -1.56
FOB1YDR110W YPL216WQ08964 1102 aa5.29□□□□□ -1.56
FOB1YDR110W YOR223WQ12015 292 aa5.29□□□□□ -1.56
FOB1YDR110W YLL058WQ12198 575 aa5.29□□□□□ -1.56
FOB1YDR110W PKH2Q12236 1081 aaKnown RBP5.29□□□□□ -1.56
FOB1YDR110W RRD2Q12461 358 aa5.29□□□□□ -1.56
FOB1YDR110W ARP6Q12509 438 aa5.29□□□□□ -1.56
FOB1YDR110W QCR7P00128 127 aa5.28□□□□□ -1.56
FOB1YDR110W ADH2P00331 348 aaKnown RBP5.28□□□□□ -1.56
FOB1YDR110W PDE2P06776 526 aa5.28□□□□□ -1.56
FOB1YDR110W SNA3P14359 133 aa5.28□□□□□ -1.56
FOB1YDR110W HXT2P23585 541 aa5.28□□□□□ -1.56
FOB1YDR110W PAT1P25644 796 aaKnown RBP5.28□□□□□ -1.56
FOB1YDR110W VMA6P32366 345 aaKnown RBP5.28□□□□□ -1.56
FOB1YDR110W ASC1P38011 319 aaKnown RBP5.28□□□□□ -1.56
FOB1YDR110W YJL193WP39542 402 aa5.28□□□□□ -1.56
FOB1YDR110W RTT101P47050 842 aa5.28□□□□□ -1.56
FOB1YDR110W YJR111CP47148 283 aaKnown RBP5.28□□□□□ -1.56
FOB1YDR110W YGL204CP53089 101 aa5.28□□□□□ -1.56
FOB1YDR110W OCA2P53949 197 aa5.28□□□□□ -1.56
FOB1YDR110W SPP2Q02521 185 aa5.28□□□□□ -1.56
FOB1YDR110W MFM1Q02783 413 aa5.28□□□□□ -1.56
FOB1YDR110W SLD5Q03406 294 aa5.28□□□□□ -1.56
FOB1YDR110W RRP45Q05636 305 aaKnown RBP5.28□□□□□ -1.56
FOB1YDR110W PUS5Q06244 254 aa5.28□□□□□ -1.56
FOB1YDR110W DXO1Q06349 442 aa5.28□□□□□ -1.56
FOB1YDR110W AAD15Q08361 143 aa5.28□□□□□ -1.56
FOB1YDR110W PRP46Q12417 451 aaPredicted RBP5.28□□□□□ -1.56
FOB1YDR110W TY1A-DR3Q12441 440 aa5.28□□□□□ -1.56
FOB1YDR110W ZPS1Q12512 249 aa5.28□□□□□ -1.56
FOB1YDR110W SPO24Q3E752 67 aa5.28□□□□□ -1.56
FOB1YDR110W UBA3Q99344 299 aa5.28□□□□□ -1.56
FOB1YDR110W RAD50P12753 1312 aa5.28□□□□□ -1.56
FOB1YDR110W MRP13P12686 339 aa5.28□□□□□ -1.56
FOB1YDR110W PRE4P30657 266 aa5.28□□□□□ -1.56
FOB1YDR110W LIP5P32875 414 aa5.28□□□□□ -1.56
FOB1YDR110W QNS1P38795 714 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms