RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C AHC1Q12433 566 aa2.5□□□□□ -2.01
AFR1YDR085C YRF1-4O13559 1382 aa2.5□□□□□ -2.01
AFR1YDR085C SRV2P17555 526 aaKnown RBP2.5□□□□□ -2.01
AFR1YDR085C CLN1P20437 546 aa2.5□□□□□ -2.01
AFR1YDR085C AIM10P39965 576 aaKnown RBP2.5□□□□□ -2.01
AFR1YDR085C UTP18P40362 594 aaPredicted RBP2.5□□□□□ -2.01
AFR1YDR085C YGR250CP53316 781 aaKnown RBP2.5□□□□□ -2.01
AFR1YDR085C PLP2Q12017 286 aa2.5□□□□□ -2.01
AFR1YDR085C HSP26P15992 214 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
AFR1YDR085C RRN10P38204 145 aa2.49□□□□□ -2.01
AFR1YDR085C RRP4P38792 359 aaKnown RBP2.49□□□□□ -2.01
AFR1YDR085C NAB3P38996 802 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
AFR1YDR085C KAP120Q02932 1032 aa2.49□□□□□ -2.01
AFR1YDR085C DON1Q05610 365 aa2.49□□□□□ -2.01
AFR1YDR085C DIS3Q08162 1001 aaKnown RBP2.49□□□□□ -2.01
AFR1YDR085C YCR051WP25631 222 aa2.48□□□□□ -2.01
AFR1YDR085C MRP21P38175 177 aa2.48□□□□□ -2.01
AFR1YDR085C MTQ1P53944 314 aa2.48□□□□□ -2.01
AFR1YDR085C NUP116Q02630 1113 aa2.48□□□□□ -2.01
AFR1YDR085C ROY1Q04847 553 aa2.48□□□□□ -2.01
AFR1YDR085C BUG1Q12191 341 aa2.48□□□□□ -2.01
AFR1YDR085C TPT1Q12272 230 aaKnown RBP2.48□□□□□ -2.01
AFR1YDR085C SNU66Q12420 587 aaPredicted RBP2.48□□□□□ -2.01
AFR1YDR085C IZH2Q12442 317 aa2.48□□□□□ -2.01
AFR1YDR085C REC107P21651 314 aa2.48□□□□□ -2.01
AFR1YDR085C NIP1P32497 812 aaKnown RBP2.48□□□□□ -2.01
AFR1YDR085C MMS4P38257 691 aa2.48□□□□□ -2.01
AFR1YDR085C SBE22P38814 852 aa2.48□□□□□ -2.01
AFR1YDR085C SRB7P47822 140 aa2.48□□□□□ -2.01
AFR1YDR085C URH1Q04179 340 aa2.48□□□□□ -2.01
AFR1YDR085C SNT309Q06091 175 aaPredicted RBP2.48□□□□□ -2.01
AFR1YDR085C RAX1Q08760 435 aa2.48□□□□□ -2.01
AFR1YDR085C ATG34Q12292 412 aa2.48□□□□□ -2.01
AFR1YDR085C YDL012CQ12489 107 aa2.48□□□□□ -2.01
AFR1YDR085C TY1B-AO13527 1196 aaKnown RBP2.47□□□□□ -2.01
AFR1YDR085C PHA2P32452 334 aa2.47□□□□□ -2.01
AFR1YDR085C CHK1P38147 527 aa2.47□□□□□ -2.01
AFR1YDR085C NOC2P39744 710 aaKnown RBP2.47□□□□□ -2.01
AFR1YDR085C RRG1Q12167 365 aaPredicted RBP2.47□□□□□ -2.01
AFR1YDR085C ADE4P04046 510 aaKnown RBP2.46□□□□□ -2.02
AFR1YDR085C NAM2P11325 894 aa2.46□□□□□ -2.02
AFR1YDR085C URA4P20051 364 aa2.46□□□□□ -2.02
AFR1YDR085C YCL068CP25593 260 aa2.46□□□□□ -2.02
AFR1YDR085C RRP1P35178 278 aaPredicted RBP2.46□□□□□ -2.02
AFR1YDR085C MIG3P39943 394 aa2.46□□□□□ -2.02
AFR1YDR085C BNI5P53890 448 aaKnown RBP2.46□□□□□ -2.02
AFR1YDR085C ADA2Q02336 434 aa2.46□□□□□ -2.02
AFR1YDR085C ACL4Q03771 387 aa2.46□□□□□ -2.02
AFR1YDR085C AFI1Q99222 893 aa2.46□□□□□ -2.02
AFR1YDR085C COX3P00420 269 aa2.45□□□□□ -2.02
AFR1YDR085C IMA3P0CW40 589 aa2.45□□□□□ -2.02
AFR1YDR085C IMA4P0CW41 589 aa2.45□□□□□ -2.02
AFR1YDR085C BRF1P29056 596 aa2.45□□□□□ -2.02
AFR1YDR085C BYE1P36106 594 aa2.45□□□□□ -2.02
AFR1YDR085C YIL029CP40538 142 aa2.45□□□□□ -2.02
AFR1YDR085C OCA2P53949 197 aa2.45□□□□□ -2.02
AFR1YDR085C CCE1Q03702 353 aa2.45□□□□□ -2.02
AFR1YDR085C YMR130WQ04223 302 aa2.45□□□□□ -2.02
AFR1YDR085C DCS1Q06151 350 aa2.45□□□□□ -2.02
AFR1YDR085C RRP9Q06506 573 aaKnown RBP2.45□□□□□ -2.02
AFR1YDR085C IMA2Q08295 589 aa2.45□□□□□ -2.02
AFR1YDR085C JID1Q12350 301 aa2.45□□□□□ -2.02
AFR1YDR085C FUR1P18562 216 aaKnown RBP2.45□□□□□ -2.02
AFR1YDR085C YBR056WP38081 501 aa2.45□□□□□ -2.02
AFR1YDR085C COX14P39103 70 aa2.45□□□□□ -2.02
AFR1YDR085C SIM1P40472 476 aa2.45□□□□□ -2.02
AFR1YDR085C YPS6P40583 537 aa2.45□□□□□ -2.02
AFR1YDR085C MRM2P53123 320 aa2.45□□□□□ -2.02
AFR1YDR085C MSI1P13712 422 aa2.44□□□□□ -2.02
AFR1YDR085C ADK2P26364 225 aa2.44□□□□□ -2.02
AFR1YDR085C URA7P28274 579 aaKnown RBP2.44□□□□□ -2.02
AFR1YDR085C RTC2P38279 296 aa2.44□□□□□ -2.02
AFR1YDR085C RPT4P53549 437 aaKnown RBP2.44□□□□□ -2.02
AFR1YDR085C RIF2Q06208 395 aa2.44□□□□□ -2.02
AFR1YDR085C MMR1Q06324 491 aa2.44□□□□□ -2.02
AFR1YDR085C NDE2Q07500 545 aa2.44□□□□□ -2.02
AFR1YDR085C YGK3Q12222 375 aaPredicted RBP2.44□□□□□ -2.02
AFR1YDR085C HOM3P10869 527 aa2.43□□□□□ -2.02
AFR1YDR085C RPB5P20434 215 aa2.43□□□□□ -2.02
AFR1YDR085C MID2P36027 376 aa2.43□□□□□ -2.02
AFR1YDR085C YDR131CQ03899 556 aa2.43□□□□□ -2.02
AFR1YDR085C MDM36Q06820 579 aa2.43□□□□□ -2.02
AFR1YDR085C SMF3Q12078 473 aaPredicted RBP2.43□□□□□ -2.02
AFR1YDR085C JNM1P36224 373 aa2.43□□□□□ -2.02
AFR1YDR085C DFG10P40526 253 aa2.43□□□□□ -2.02
AFR1YDR085C TOM22P49334 152 aa2.43□□□□□ -2.02
AFR1YDR085C STD1Q02794 444 aa2.43□□□□□ -2.02
AFR1YDR085C MED2Q12124 431 aa2.43□□□□□ -2.02
AFR1YDR085C AAT2P23542 418 aaKnown RBP2.42□□□□□ -2.02
AFR1YDR085C EXG1P23776 448 aaKnown RBP2.42□□□□□ -2.02
AFR1YDR085C ERV1P27882 189 aa2.42□□□□□ -2.02
AFR1YDR085C SPT10P35208 640 aa2.42□□□□□ -2.02
AFR1YDR085C SLM4P38247 162 aa2.42□□□□□ -2.02
AFR1YDR085C CAK1P43568 368 aaPredicted RBP2.42□□□□□ -2.02
AFR1YDR085C YFR057WP43625 151 aa2.42□□□□□ -2.02
AFR1YDR085C BIR1P47134 954 aa2.42□□□□□ -2.02
AFR1YDR085C BNS1P50084 137 aa2.42□□□□□ -2.02
AFR1YDR085C MST27P53176 234 aa2.42□□□□□ -2.02
AFR1YDR085C HOT1Q03213 719 aa2.42□□□□□ -2.02
AFR1YDR085C RPN9Q04062 393 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms