RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	PCL7	P40186	285 aa		3	□□□□□ -1.93
HBT1	YDL223C	FIS1	P40515	155 aa		3	□□□□□ -1.93
HBT1	YDL223C	ROG1	P53118	685 aa		3	□□□□□ -1.93
HBT1	YDL223C	PRP3	Q03338	469 aa	Predicted RBP	3	□□□□□ -1.93
HBT1	YDL223C	YMR087W	Q04299	284 aa		3	□□□□□ -1.93
HBT1	YDL223C	CSM3	Q04659	317 aa		3	□□□□□ -1.93
HBT1	YDL223C	IRC10	Q08118	586 aa		3	□□□□□ -1.93
HBT1	YDL223C	PKH2	Q12236	1081 aa	Known RBP	3	□□□□□ -1.93
HBT1	YDL223C	NDJ1	Q12366	352 aa		3	□□□□□ -1.93
HBT1	YDL223C	ILV1	P00927	576 aa	Known RBP	3	□□□□□ -1.93
HBT1	YDL223C	CDC43	P18898	376 aa		3	□□□□□ -1.93
HBT1	YDL223C	UBA1	P22515	1024 aa	Known RBP	3	□□□□□ -1.93
HBT1	YDL223C	FUN19	P28003	413 aa	Predicted RBP	3	□□□□□ -1.93
HBT1	YDL223C	RFS1	P38234	210 aa	Known RBP	3	□□□□□ -1.93
HBT1	YDL223C	YHL026C	P38740	315 aa		3	□□□□□ -1.93
HBT1	YDL223C	YHR177W	P38867	453 aa		3	□□□□□ -1.93
HBT1	YDL223C	PHO90	P39535	881 aa		3	□□□□□ -1.93
HBT1	YDL223C	YER130C	P39959	443 aa		3	□□□□□ -1.93
HBT1	YDL223C	ALK1	P43633	760 aa	Known RBP	3	□□□□□ -1.93
HBT1	YDL223C	OSW1	Q08692	278 aa		3	□□□□□ -1.93
HBT1	YDL223C	ALG1	P16661	449 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	VPS1	P21576	704 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	RIM1	P32445	135 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	BUD2	P33314	1104 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	YKL097C	P34245	136 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	WSS1	P38838	269 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	URB2	P47108	1174 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	YJR154W	P47181	346 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	TIM44	Q01852	431 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	SHR3	Q02774	210 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	SMC5	Q08204	1093 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	BSC1	Q12140	328 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	CEX1	Q12453	761 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	GPH1	P06738	902 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	RHO2	P06781	192 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	TYR1	P20049	452 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	DBP3	P20447	523 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	MBR1	P23493	339 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	TMT1	P32643	299 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	YNL058C	P53947	316 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	RPN9	Q04062	393 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	PHO92	Q06390	306 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	ADE4	P04046	510 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	ILV5	P06168	395 aa	Known RBP	2.99	□□□□□ -1.93
HBT1	YDL223C	PEP5	P12868	1029 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	MSG5	P38590	489 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	STN1	P38960	494 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	VTC3	Q02725	835 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	EKI1	Q03764	534 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	CAC2	Q04199	468 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	RDR1	Q08904	546 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	HER1	Q12276	1246 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	MDY2	Q12285	212 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	RRI1	Q12468	440 aa		2.99	□□□□□ -1.93
HBT1	YDL223C	THR4	P16120	514 aa	Known RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	YKL023W	P36103	277 aa	Known RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	IRC7	P43623	340 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	NMD5	P46970	1048 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	BPL1	P48445	690 aa	Predicted RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	YNL134C	P53912	376 aa	Known RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	AQR1	P53943	586 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	ARP5	P53946	755 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	ERV25	P54837	211 aa	Known RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	RHO4	Q00246	291 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	FUS2	Q05670	677 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
HBT1	YDL223C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	LEU4	P06208	619 aa	Known RBP	2.98	□□□□□ -1.93
HBT1	YDL223C	PMR1	P13586	950 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	SAG1	P20840	650 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	YBR139W	P38109	508 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	MMS4	P38257	691 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	ATP23	P53722	227 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	ADA2	Q02336	434 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	RSC9	Q03124	581 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	NDL1	Q06568	189 aa		2.98	□□□□□ -1.93
HBT1	YDL223C	SCEI	P03882	235 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	TCP1	P12612	559 aa	Known RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	GLN3	P18494	730 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	NIP1	P32497	812 aa	Known RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	SPP381	P38282	291 aa	Predicted RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	MNL1	P38888	796 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	MMF1	P40185	145 aa	Known RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	TRS85	P46944	698 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	PHO86	P46956	311 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	UBP8	P50102	471 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	SMA2	Q04658	369 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	TIP41	Q12199	356 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	YDR061W	Q12298	539 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	COX4	P04037	155 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	NFT1	P0CE68	1218 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	RPL42A	P0CX27	106 aa	Known RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	RPL42B	P0CX28	106 aa	Known RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	SRV2	P17555	526 aa	Known RBP	2.97	□□□□□ -1.93
HBT1	YDL223C	YSC83	P32792	385 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	CSE2	P33308	149 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	LAG1	P38703	411 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	POP1	P41812	875 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	LAM5	P43560	674 aa		2.97	□□□□□ -1.93
HBT1	YDL223C	TOS2	P50078	622 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms