RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	LSM5	P40089	93 aa	Known RBP	3.8	□□□□□ -1.8
UBS1	YBR165W	PHB2	P50085	310 aa		3.8	□□□□□ -1.8
UBS1	YBR165W	MDM1	Q01846	1127 aa		3.8	□□□□□ -1.8
UBS1	YBR165W	KAP120	Q02932	1032 aa		3.8	□□□□□ -1.8
UBS1	YBR165W	TPT1	Q12272	230 aa	Known RBP	3.8	□□□□□ -1.8
UBS1	YBR165W	MRP21	P38175	177 aa		3.79	□□□□□ -1.8
UBS1	YBR165W	RRP4	P38792	359 aa	Known RBP	3.79	□□□□□ -1.8
UBS1	YBR165W	NOC2	P39744	710 aa	Known RBP	3.79	□□□□□ -1.8
UBS1	YBR165W	GPD2	P41911	440 aa	Known RBP	3.79	□□□□□ -1.8
UBS1	YBR165W	SRB7	P47822	140 aa		3.79	□□□□□ -1.8
UBS1	YBR165W	YMR155W	Q03795	547 aa		3.79	□□□□□ -1.8
UBS1	YBR165W	URH1	Q04179	340 aa		3.79	□□□□□ -1.8
UBS1	YBR165W	ATG34	Q12292	412 aa		3.79	□□□□□ -1.8
UBS1	YBR165W	INH1	P01097	85 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	CLN1	P20437	546 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	REC107	P21651	314 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	YCR051W	P25631	222 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	RRN10	P38204	145 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	YHR131C	P38835	850 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	AIM10	P39965	576 aa	Known RBP	3.78	□□□□□ -1.8
UBS1	YBR165W	YJR085C	P47131	105 aa	Known RBP	3.78	□□□□□ -1.8
UBS1	YBR165W	YGR250C	P53316	781 aa	Known RBP	3.78	□□□□□ -1.8
UBS1	YBR165W	MTQ1	P53944	314 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	RAX1	Q08760	435 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	IZH2	Q12442	317 aa		3.78	□□□□□ -1.8
UBS1	YBR165W	YRF1-4	O13559	1382 aa		3.77	□□□□□ -1.81
UBS1	YBR165W	SRV2	P17555	526 aa	Known RBP	3.77	□□□□□ -1.81
UBS1	YBR165W	RRP1	P35178	278 aa	Predicted RBP	3.77	□□□□□ -1.81
UBS1	YBR165W	NUP116	Q02630	1113 aa		3.77	□□□□□ -1.81
UBS1	YBR165W	ROY1	Q04847	553 aa		3.77	□□□□□ -1.81
UBS1	YBR165W	MMS4	P38257	691 aa		3.76	□□□□□ -1.81
UBS1	YBR165W	SBE22	P38814	852 aa		3.76	□□□□□ -1.81
UBS1	YBR165W	DIS3	Q08162	1001 aa	Known RBP	3.76	□□□□□ -1.81
UBS1	YBR165W	JID1	Q12350	301 aa		3.76	□□□□□ -1.81
UBS1	YBR165W	AHC1	Q12433	566 aa		3.76	□□□□□ -1.81
UBS1	YBR165W	ADE4	P04046	510 aa	Known RBP	3.75	□□□□□ -1.81
UBS1	YBR165W	YCL068C	P25593	260 aa		3.75	□□□□□ -1.81
UBS1	YBR165W	PHA2	P32452	334 aa		3.75	□□□□□ -1.81
UBS1	YBR165W	CHK1	P38147	527 aa		3.75	□□□□□ -1.81
UBS1	YBR165W	SNT309	Q06091	175 aa	Predicted RBP	3.75	□□□□□ -1.81
UBS1	YBR165W	RRP9	Q06506	573 aa	Known RBP	3.75	□□□□□ -1.81
UBS1	YBR165W	URA4	P20051	364 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	RPB5	P20434	215 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	YIL029C	P40538	142 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	YPS6	P40583	537 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	TOM22	P49334	152 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	RPT4	P53549	437 aa	Known RBP	3.74	□□□□□ -1.81
UBS1	YBR165W	ADA2	Q02336	434 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	ACL4	Q03771	387 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	YMR130W	Q04223	302 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	NDE2	Q07500	545 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	MED2	Q12124	431 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	YDL012C	Q12489	107 aa		3.74	□□□□□ -1.81
UBS1	YBR165W	NAM2	P11325	894 aa		3.73	□□□□□ -1.81
UBS1	YBR165W	MID2	P36027	376 aa		3.73	□□□□□ -1.81
UBS1	YBR165W	BYE1	P36106	594 aa		3.73	□□□□□ -1.81
UBS1	YBR165W	MIG3	P39943	394 aa		3.73	□□□□□ -1.81
UBS1	YBR165W	BNI5	P53890	448 aa	Known RBP	3.73	□□□□□ -1.81
UBS1	YBR165W	DCS1	Q06151	350 aa		3.73	□□□□□ -1.81
UBS1	YBR165W	MDM36	Q06820	579 aa		3.73	□□□□□ -1.81
UBS1	YBR165W	RRG1	Q12167	365 aa	Predicted RBP	3.73	□□□□□ -1.81
UBS1	YBR165W	TY1B-A	O13527	1196 aa	Known RBP	3.72	□□□□□ -1.81
UBS1	YBR165W	COX3	P00420	269 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	IMA3	P0CW40	589 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	IMA4	P0CW41	589 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	MSI1	P13712	422 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	BRF1	P29056	596 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	COX14	P39103	70 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	SIM1	P40472	476 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	CCE1	Q03702	353 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	RPN9	Q04062	393 aa	Known RBP	3.72	□□□□□ -1.81
UBS1	YBR165W	RIF2	Q06208	395 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	IMA2	Q08295	589 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	YGK3	Q12222	375 aa	Predicted RBP	3.72	□□□□□ -1.81
UBS1	YBR165W	AFI1	Q99222	893 aa		3.72	□□□□□ -1.81
UBS1	YBR165W	FUR1	P18562	216 aa	Known RBP	3.71	□□□□□ -1.82
UBS1	YBR165W	ADK2	P26364	225 aa		3.71	□□□□□ -1.82
UBS1	YBR165W	URA7	P28274	579 aa	Known RBP	3.71	□□□□□ -1.82
UBS1	YBR165W	YBR056W	P38081	501 aa		3.71	□□□□□ -1.82
UBS1	YBR165W	RTC2	P38279	296 aa		3.71	□□□□□ -1.82
UBS1	YBR165W	MRM2	P53123	320 aa		3.71	□□□□□ -1.82
UBS1	YBR165W	OCA2	P53949	197 aa		3.71	□□□□□ -1.82
UBS1	YBR165W	CMS1	Q07897	291 aa	Known RBP	3.71	□□□□□ -1.82
UBS1	YBR165W	HOM3	P10869	527 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	PRR1	P28708	518 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	JNM1	P36224	373 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	DFG10	P40526	253 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	HOT1	Q03213	719 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	YDR131C	Q03899	556 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	MMR1	Q06324	491 aa		3.7	□□□□□ -1.82
UBS1	YBR165W	AAT2	P23542	418 aa	Known RBP	3.69	□□□□□ -1.82
UBS1	YBR165W	SPT10	P35208	640 aa		3.69	□□□□□ -1.82
UBS1	YBR165W	CAK1	P43568	368 aa	Predicted RBP	3.69	□□□□□ -1.82
UBS1	YBR165W	YFR057W	P43625	151 aa		3.69	□□□□□ -1.82
UBS1	YBR165W	STD1	Q02794	444 aa		3.69	□□□□□ -1.82
UBS1	YBR165W	MMT1	Q03218	510 aa		3.69	□□□□□ -1.82
UBS1	YBR165W	MTR10	Q99189	972 aa		3.69	□□□□□ -1.82
UBS1	YBR165W	EXG1	P23776	448 aa	Known RBP	3.68	□□□□□ -1.82
UBS1	YBR165W	SLM4	P38247	162 aa		3.68	□□□□□ -1.82
UBS1	YBR165W	GAT2	P40209	560 aa		3.68	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms