RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YBR139WP38109 508 aa2.27□□□□□ -2.05
RPB11YOL005C MTC6P38849 526 aa2.27□□□□□ -2.05
RPB11YOL005C MST28P39552 234 aa2.27□□□□□ -2.05
RPB11YOL005C ZIM17P42844 174 aa2.27□□□□□ -2.05
RPB11YOL005C YJR011CP47086 261 aaPredicted RBP2.27□□□□□ -2.05
RPB11YOL005C SKO1Q02100 647 aa2.27□□□□□ -2.05
RPB11YOL005C BET5Q03630 159 aa2.27□□□□□ -2.05
RPB11YOL005C SMA2Q04658 369 aa2.27□□□□□ -2.05
RPB11YOL005C TSR1Q07381 788 aaKnown RBP2.27□□□□□ -2.05
RPB11YOL005C SOR2Q07786 357 aa2.27□□□□□ -2.05
RPB11YOL005C ESA1Q08649 445 aa2.27□□□□□ -2.05
RPB11YOL005C SNX3Q08826 162 aaKnown RBP2.27□□□□□ -2.05
RPB11YOL005C MDS3P53094 1487 aa2.26□□□□□ -2.05
RPB11YOL005C HHF1P02309 103 aaKnown RBP2.26□□□□□ -2.05
RPB11YOL005C CLB1P24868 471 aa2.26□□□□□ -2.05
RPB11YOL005C KRE2P27809 442 aa2.26□□□□□ -2.05
RPB11YOL005C NAM9P27929 486 aa2.26□□□□□ -2.05
RPB11YOL005C PAD1P33751 242 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RPB11YOL005C PTH1P38876 190 aaKnown RBP2.26□□□□□ -2.05
RPB11YOL005C TOF1P53840 1238 aa2.26□□□□□ -2.05
RPB11YOL005C OCA2P53949 197 aa2.26□□□□□ -2.05
RPB11YOL005C PPM1Q04081 328 aa2.26□□□□□ -2.05
RPB11YOL005C AIM32Q04689 311 aa2.26□□□□□ -2.05
RPB11YOL005C RRN11Q04712 507 aa2.26□□□□□ -2.05
RPB11YOL005C MDM30Q05930 598 aa2.26□□□□□ -2.05
RPB11YOL005C ISN1Q99312 450 aa2.26□□□□□ -2.05
RPB11YOL005C HOM3P10869 527 aa2.25□□□□□ -2.05
RPB11YOL005C SEC63P14906 663 aa2.25□□□□□ -2.05
RPB11YOL005C SPS22P25380 463 aa2.25□□□□□ -2.05
RPB11YOL005C ITR1P30605 584 aa2.25□□□□□ -2.05
RPB11YOL005C KKQ8P36004 724 aa2.25□□□□□ -2.05
RPB11YOL005C MIX23P38162 196 aa2.25□□□□□ -2.05
RPB11YOL005C RRN10P38204 145 aa2.25□□□□□ -2.05
RPB11YOL005C RRT2P38332 387 aa2.25□□□□□ -2.05
RPB11YOL005C RRP4P38792 359 aaKnown RBP2.25□□□□□ -2.05
RPB11YOL005C SPG5P42933 373 aa2.25□□□□□ -2.05
RPB11YOL005C CAK1P43568 368 aaPredicted RBP2.25□□□□□ -2.05
RPB11YOL005C YPI1P43587 155 aa2.25□□□□□ -2.05
RPB11YOL005C ELP3Q02908 557 aaKnown RBP2.25□□□□□ -2.05
RPB11YOL005C GIP3Q03016 1276 aa2.25□□□□□ -2.05
RPB11YOL005C DCS1Q06151 350 aa2.25□□□□□ -2.05
RPB11YOL005C SGT1Q08446 395 aa2.25□□□□□ -2.05
RPB11YOL005C RRP12Q12754 1228 aaKnown RBP2.25□□□□□ -2.05
RPB11YOL005C RAD61Q99359 647 aa2.25□□□□□ -2.05
RPB11YOL005C THO2P53552 1597 aaKnown RBP2.24□□□□□ -2.05
RPB11YOL005C SPT15P13393 240 aaKnown RBP2.24□□□□□ -2.05
RPB11YOL005C SNT1P25357 1226 aa2.24□□□□□ -2.05
RPB11YOL005C LSB5P25369 354 aa2.24□□□□□ -2.05
RPB11YOL005C URA7P28274 579 aaKnown RBP2.24□□□□□ -2.05
RPB11YOL005C SMY1P32364 656 aaKnown RBP2.24□□□□□ -2.05
RPB11YOL005C MUD1P32605 298 aaKnown RBP2.24□□□□□ -2.05
RPB11YOL005C PXA2P34230 853 aa2.24□□□□□ -2.05
RPB11YOL005C YBR056WP38081 501 aa2.24□□□□□ -2.05
RPB11YOL005C SRP72P38688 640 aaKnown RBP2.24□□□□□ -2.05
RPB11YOL005C PRM5P40476 318 aa2.24□□□□□ -2.05
RPB11YOL005C YNR048WP53740 393 aa2.24□□□□□ -2.05
RPB11YOL005C HXT11P54862 567 aa2.24□□□□□ -2.05
RPB11YOL005C OAZ1Q02803 292 aa2.24□□□□□ -2.05
RPB11YOL005C HOT1Q03213 719 aa2.24□□□□□ -2.05
RPB11YOL005C RSN1Q03516 953 aa2.24□□□□□ -2.05
RPB11YOL005C ACL4Q03771 387 aa2.24□□□□□ -2.05
RPB11YOL005C YDR131CQ03899 556 aa2.24□□□□□ -2.05
RPB11YOL005C TLG2Q08144 397 aa2.24□□□□□ -2.05
RPB11YOL005C ORT1Q12375 292 aa2.24□□□□□ -2.05
RPB11YOL005C SMC6Q12749 1114 aa2.24□□□□□ -2.05
RPB11YOL005C SCEIP03882 235 aa2.23□□□□□ -2.05
RPB11YOL005C ILV5P06168 395 aaKnown RBP2.23□□□□□ -2.05
RPB11YOL005C MNS1P32906 549 aa2.23□□□□□ -2.05
RPB11YOL005C SDH3P33421 198 aa2.23□□□□□ -2.05
RPB11YOL005C RFS1P38234 210 aaKnown RBP2.23□□□□□ -2.05
RPB11YOL005C SLM4P38247 162 aa2.23□□□□□ -2.05
RPB11YOL005C RFC3P38629 340 aa2.23□□□□□ -2.05
RPB11YOL005C FAA2P39518 744 aa2.23□□□□□ -2.05
RPB11YOL005C PHO86P46956 311 aa2.23□□□□□ -2.05
RPB11YOL005C AZR1P50080 613 aa2.23□□□□□ -2.05
RPB11YOL005C YGL242CP53066 181 aa2.23□□□□□ -2.05
RPB11YOL005C GYL1Q04322 720 aa2.23□□□□□ -2.05
RPB11YOL005C MMR1Q06324 491 aa2.23□□□□□ -2.05
RPB11YOL005C SSN2P38931 1420 aa2.23□□□□□ -2.05
RPB11YOL005C BPT1P14772 1559 aa2.23□□□□□ -2.05
RPB11YOL005C REV3P14284 1504 aa2.22□□□□□ -2.05
RPB11YOL005C TRP1P00912 224 aa2.22□□□□□ -2.05
RPB11YOL005C REV1P12689 985 aa2.22□□□□□ -2.05
RPB11YOL005C DAL2P25335 343 aa2.22□□□□□ -2.05
RPB11YOL005C VMA8P32610 256 aaKnown RBP2.22□□□□□ -2.05
RPB11YOL005C YOX1P34161 385 aa2.22□□□□□ -2.05
RPB11YOL005C SWH1P35845 1188 aa2.22□□□□□ -2.05
RPB11YOL005C HEL1P36113 551 aa2.22□□□□□ -2.05
RPB11YOL005C PIM1P36775 1133 aa2.22□□□□□ -2.05
RPB11YOL005C GPI15P53961 229 aa2.22□□□□□ -2.05
RPB11YOL005C YMR181CQ03231 154 aa2.22□□□□□ -2.05
RPB11YOL005C YLR345WQ06137 509 aa2.22□□□□□ -2.05
RPB11YOL005C SKI7Q08491 747 aaPredicted RBP2.22□□□□□ -2.05
RPB11YOL005C RKM1Q08961 583 aaPredicted RBP2.22□□□□□ -2.05
RPB11YOL005C YRM1Q12340 786 aa2.22□□□□□ -2.05
RPB11YOL005C NAM2P11325 894 aa2.21□□□□□ -2.06
RPB11YOL005C CLN3P13365 580 aa2.21□□□□□ -2.06
RPB11YOL005C SPO12P17123 173 aa2.21□□□□□ -2.06
RPB11YOL005C MDH1P17505 334 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
RPB11YOL005C PET123P17558 318 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms