RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C YIR016WP40572 265 aa3.13□□□□□ -1.91
VPS9YML097C MPS2P53159 387 aa3.13□□□□□ -1.91
VPS9YML097C PRO2P54885 456 aaKnown RBP3.13□□□□□ -1.91
VPS9YML097C RLI1Q03195 608 aaKnown RBP3.13□□□□□ -1.91
VPS9YML097C YMR087WQ04299 284 aa3.13□□□□□ -1.91
VPS9YML097C MRPL1Q04599 285 aa3.13□□□□□ -1.91
VPS9YML097C NDL1Q06568 189 aa3.13□□□□□ -1.91
VPS9YML097C IPK1Q06667 281 aa3.13□□□□□ -1.91
VPS9YML097C IMA2Q08295 589 aa3.13□□□□□ -1.91
VPS9YML097C YOR012WQ12351 137 aa3.13□□□□□ -1.91
VPS9YML097C SRN2Q99176 213 aa3.13□□□□□ -1.91
VPS9YML097C HIS4P00815 799 aaKnown RBP3.12□□□□□ -1.91
VPS9YML097C OPI3P05375 206 aa3.12□□□□□ -1.91
VPS9YML097C CHS1P08004 1131 aa3.12□□□□□ -1.91
VPS9YML097C EXO70P19658 623 aa3.12□□□□□ -1.91
VPS9YML097C HNM1P19807 563 aa3.12□□□□□ -1.91
VPS9YML097C SLM5P25345 492 aaKnown RBP3.12□□□□□ -1.91
VPS9YML097C YBR056WP38081 501 aa3.12□□□□□ -1.91
VPS9YML097C RRP3P38712 501 aaKnown RBP3.12□□□□□ -1.91
VPS9YML097C RTT105P40063 208 aa3.12□□□□□ -1.91
VPS9YML097C BRO1P48582 844 aa3.12□□□□□ -1.91
VPS9YML097C YIP1P53039 248 aa3.12□□□□□ -1.91
VPS9YML097C SMA2Q04658 369 aa3.12□□□□□ -1.91
VPS9YML097C MRPL51Q06090 140 aaPredicted RBP3.12□□□□□ -1.91
VPS9YML097C MLH2Q07980 695 aa3.12□□□□□ -1.91
VPS9YML097C THI20Q08224 551 aa3.12□□□□□ -1.91
VPS9YML097C BUG1Q12191 341 aa3.12□□□□□ -1.91
VPS9YML097C NDJ1Q12366 352 aa3.12□□□□□ -1.91
VPS9YML097C PFK27Q12471 397 aaPredicted RBP3.12□□□□□ -1.91
VPS9YML097C YAR066WP0CX18 203 aa3.12□□□□□ -1.91
VPS9YML097C YHR214WP0CX19 203 aa3.12□□□□□ -1.91
VPS9YML097C SAG1P20840 650 aa3.12□□□□□ -1.91
VPS9YML097C ERG1P32476 496 aaKnown RBP3.12□□□□□ -1.91
VPS9YML097C SSE1P32589 693 aaKnown RBP3.12□□□□□ -1.91
VPS9YML097C RGT1P32862 1170 aa3.12□□□□□ -1.91
VPS9YML097C RIB7P33312 244 aa3.12□□□□□ -1.91
VPS9YML097C MIC60P36112 540 aa3.12□□□□□ -1.91
VPS9YML097C YBL028CP38202 106 aa3.12□□□□□ -1.91
VPS9YML097C RTT107P38850 1070 aa3.12□□□□□ -1.91
VPS9YML097C YDR089WP38966 869 aa3.12□□□□□ -1.91
VPS9YML097C CSM2P40465 213 aa3.12□□□□□ -1.91
VPS9YML097C PAC11P40960 533 aa3.12□□□□□ -1.91
VPS9YML097C FRE4P53746 719 aa3.12□□□□□ -1.91
VPS9YML097C BET4Q00618 327 aa3.12□□□□□ -1.91
VPS9YML097C IRC15Q02733 499 aa3.12□□□□□ -1.91
VPS9YML097C MGR3Q04472 501 aa3.12□□□□□ -1.91
VPS9YML097C THI7Q05998 598 aa3.12□□□□□ -1.91
VPS9YML097C NSE1Q07913 336 aa3.12□□□□□ -1.91
VPS9YML097C PEX27Q08580 376 aa3.12□□□□□ -1.91
VPS9YML097C ATX2Q12067 313 aa3.12□□□□□ -1.91
VPS9YML097C SFG1Q12507 346 aa3.12□□□□□ -1.91
VPS9YML097C CSR2Q12734 1121 aa3.12□□□□□ -1.91
VPS9YML097C RDS1P25611 832 aa3.11□□□□□ -1.91
VPS9YML097C DAL80P26343 269 aa3.11□□□□□ -1.91
VPS9YML097C PPQ1P32945 549 aa3.11□□□□□ -1.91
VPS9YML097C SPC34P36131 295 aa3.11□□□□□ -1.91
VPS9YML097C RIM2P38127 377 aa3.11□□□□□ -1.91
VPS9YML097C YHR177WP38867 453 aa3.11□□□□□ -1.91
VPS9YML097C LYS1P38998 373 aaRIP-Chip data3.11□□□□□ -1.91not detected
VPS9YML097C SNL1P40548 159 aa3.11□□□□□ -1.91
VPS9YML097C PSA1P41940 361 aaKnown RBP3.11□□□□□ -1.91
VPS9YML097C EFM3P47163 339 aa3.11□□□□□ -1.91
VPS9YML097C TAF12Q03761 539 aa3.11□□□□□ -1.91
VPS9YML097C RIM13Q03792 727 aa3.11□□□□□ -1.91
VPS9YML097C SNT309Q06091 175 aaPredicted RBP3.11□□□□□ -1.91
VPS9YML097C ECM7Q06200 448 aa3.11□□□□□ -1.91
VPS9YML097C RRP9Q06506 573 aaKnown RBP3.11□□□□□ -1.91
VPS9YML097C SYO1Q07395 620 aa3.11□□□□□ -1.91
VPS9YML097C RUP1Q12242 671 aa3.11□□□□□ -1.91
VPS9YML097C GLE1Q12315 538 aa3.11□□□□□ -1.91
VPS9YML097C RAD61Q99359 647 aa3.11□□□□□ -1.91
VPS9YML097C INO80P53115 1489 aa3.1□□□□□ -1.91
VPS9YML097C GAL7P08431 366 aa3.1□□□□□ -1.91
VPS9YML097C MDM10P18409 493 aa3.1□□□□□ -1.91
VPS9YML097C YCR100CP25606 316 aa3.1□□□□□ -1.91
VPS9YML097C PSO2P30620 661 aa3.1□□□□□ -1.91
VPS9YML097C YKL097CP34245 136 aa3.1□□□□□ -1.91
VPS9YML097C YAL037WP39728 267 aa3.1□□□□□ -1.91
VPS9YML097C MMF1P40185 145 aaKnown RBP3.1□□□□□ -1.91
VPS9YML097C YPS6P40583 537 aa3.1□□□□□ -1.91
VPS9YML097C YFR018CP43599 363 aa3.1□□□□□ -1.91
VPS9YML097C YHC3P47040 408 aa3.1□□□□□ -1.91
VPS9YML097C GPI15P53961 229 aa3.1□□□□□ -1.91
VPS9YML097C MPS1P54199 764 aa3.1□□□□□ -1.91
VPS9YML097C RPL15BP54780 204 aaPredicted RBP3.1□□□□□ -1.91
VPS9YML097C STD1Q02794 444 aa3.1□□□□□ -1.91
VPS9YML097C PNG1Q02890 363 aa3.1□□□□□ -1.91
VPS9YML097C BET5Q03630 159 aa3.1□□□□□ -1.91
VPS9YML097C RRB1Q04225 511 aaKnown RBP3.1□□□□□ -1.91
VPS9YML097C SEG1Q04279 960 aa3.1□□□□□ -1.91
VPS9YML097C YMR111CQ04461 462 aaPredicted RBP3.1□□□□□ -1.91
VPS9YML097C YMR310CQ04867 317 aaPredicted RBP3.1□□□□□ -1.91
VPS9YML097C YPR022CQ12139 1133 aa3.1□□□□□ -1.91
VPS9YML097C YDL009CQ12210 107 aa3.1□□□□□ -1.91
VPS9YML097C VPS63O13549 108 aa3.09□□□□□ -1.92
VPS9YML097C YER190C-BP0CX94 160 aa3.09□□□□□ -1.92
VPS9YML097C YEL077W-AP0CX95 160 aa3.09□□□□□ -1.92
VPS9YML097C YGR296C-BP0CX96 160 aa3.09□□□□□ -1.92
VPS9YML097C YPL283W-BP0CX97 160 aa3.09□□□□□ -1.92
VPS9YML097C YPR204C-AP0CX98 160 aa3.09□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms