RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W PML1Q07930 204 aaPredicted RBP4.28□□□□□ -1.72
YML040WYML040W SFG1Q12507 346 aa4.28□□□□□ -1.72
YML040WYML040W RMD5Q12508 421 aa4.28□□□□□ -1.72
YML040WYML040W MRS3P10566 314 aa4.27□□□□□ -1.73
YML040WYML040W HSP104P31539 908 aaKnown RBP4.27□□□□□ -1.73
YML040WYML040W FRE2P36033 711 aa4.27□□□□□ -1.73
YML040WYML040W PES4P39684 611 aa4.27□□□□□ -1.73
YML040WYML040W TES1P41903 349 aaKnown RBP4.27□□□□□ -1.73
YML040WYML040W MDE1P47095 244 aa4.27□□□□□ -1.73
YML040WYML040W GPI15P53961 229 aa4.27□□□□□ -1.73
YML040WYML040W YDR541CQ03049 344 aa4.27□□□□□ -1.73
YML040WYML040W TFB5Q3E7C1 72 aaPredicted RBP4.27□□□□□ -1.73
YML040WYML040W PDE2P06776 526 aa4.26□□□□□ -1.73
YML040WYML040W TRX1P22217 103 aaKnown RBP4.26□□□□□ -1.73
YML040WYML040W YCR100CP25606 316 aa4.26□□□□□ -1.73
YML040WYML040W SEC1P30619 724 aaKnown RBP4.26□□□□□ -1.73
YML040WYML040W POP2P39008 433 aa4.26□□□□□ -1.73
YML040WYML040W DIM1P41819 318 aaKnown RBP4.26□□□□□ -1.73
YML040WYML040W PDR16P53860 351 aaKnown RBP4.26□□□□□ -1.73
YML040WYML040W UTP6Q02354 440 aaKnown RBP4.26□□□□□ -1.73
YML040WYML040W ODC1Q03028 310 aa4.26□□□□□ -1.73
YML040WYML040W YLR281CQ05863 155 aa4.26□□□□□ -1.73
YML040WYML040W SKI7Q08491 747 aaPredicted RBP4.26□□□□□ -1.73
YML040WYML040W REX3Q12090 404 aa4.26□□□□□ -1.73
YML040WYML040W ATG34Q12292 412 aa4.26□□□□□ -1.73
YML040WYML040W YDR061WQ12298 539 aa4.26□□□□□ -1.73
YML040WYML040W CYB2P00175 591 aa4.25□□□□□ -1.73
YML040WYML040W CHS1P08004 1131 aa4.25□□□□□ -1.73
YML040WYML040W IMA3P0CW40 589 aa4.25□□□□□ -1.73
YML040WYML040W IMA4P0CW41 589 aa4.25□□□□□ -1.73
YML040WYML040W UBA1P22515 1024 aaKnown RBP4.25□□□□□ -1.73
YML040WYML040W ITR1P30605 584 aa4.25□□□□□ -1.73
YML040WYML040W YNK1P36010 153 aaKnown RBP4.25□□□□□ -1.73
YML040WYML040W QDR3P38227 689 aa4.25□□□□□ -1.73
YML040WYML040W RRP3P38712 501 aaKnown RBP4.25□□□□□ -1.73
YML040WYML040W LYS1P38998 373 aaRIP-Chip data4.25□□□□□ -1.73not detected
YML040WYML040W RRT5P43607 289 aa4.25□□□□□ -1.73
YML040WYML040W EFM3P47163 339 aa4.25□□□□□ -1.73
YML040WYML040W ASN2P49090 572 aaKnown RBP4.25□□□□□ -1.73
YML040WYML040W SHE4P51534 789 aa4.25□□□□□ -1.73
YML040WYML040W YIP5P53108 310 aa4.25□□□□□ -1.73
YML040WYML040W ROG1P53118 685 aa4.25□□□□□ -1.73
YML040WYML040W PRO2P54885 456 aaKnown RBP4.25□□□□□ -1.73
YML040WYML040W IPK1Q06667 281 aa4.25□□□□□ -1.73
YML040WYML040W IMA2Q08295 589 aa4.25□□□□□ -1.73
YML040WYML040W RAD57P25301 460 aa4.24□□□□□ -1.73
YML040WYML040W PHO91P27514 894 aa4.24□□□□□ -1.73
YML040WYML040W NRP1P32770 719 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
YML040WYML040W INM1P38710 295 aa4.24□□□□□ -1.73
YML040WYML040W RTT107P38850 1070 aa4.24□□□□□ -1.73
YML040WYML040W MET30P39014 640 aa4.24□□□□□ -1.73
YML040WYML040W DHH1P39517 506 aaKnown RBP4.24□□□□□ -1.73
YML040WYML040W ELP2P42935 788 aa4.24□□□□□ -1.73
YML040WYML040W IKS1P47042 667 aa4.24□□□□□ -1.73
YML040WYML040W HMS2P47175 358 aa4.24□□□□□ -1.73
YML040WYML040W PIB2P53191 635 aa4.24□□□□□ -1.73
YML040WYML040W YNL143CP53908 130 aa4.24□□□□□ -1.73
YML040WYML040W YDR415CQ04033 374 aaPredicted RBP4.24□□□□□ -1.73
YML040WYML040W FMP42Q04991 504 aa4.24□□□□□ -1.73
YML040WYML040W NOP6Q07623 225 aaKnown RBP4.24□□□□□ -1.73
YML040WYML040W SRL1Q08673 210 aa4.24□□□□□ -1.73
YML040WYML040W YLL056CQ12177 298 aa4.24□□□□□ -1.73
YML040WYML040W NFT1P0CE68 1218 aa4.23□□□□□ -1.73
YML040WYML040W YAR066WP0CX18 203 aa4.23□□□□□ -1.73
YML040WYML040W YHR214WP0CX19 203 aa4.23□□□□□ -1.73
YML040WYML040W SPO12P17123 173 aa4.23□□□□□ -1.73
YML040WYML040W LSB5P25369 354 aa4.23□□□□□ -1.73
YML040WYML040W NDI1P32340 513 aa4.23□□□□□ -1.73
YML040WYML040W CYS4P32582 507 aaKnown RBP4.23□□□□□ -1.73
YML040WYML040W GLC7P32598 312 aaKnown RBP4.23□□□□□ -1.73
YML040WYML040W YSC83P32792 385 aa4.23□□□□□ -1.73
YML040WYML040W RSM22P36056 628 aa4.23□□□□□ -1.73
YML040WYML040W RIM2P38127 377 aa4.23□□□□□ -1.73
YML040WYML040W AVT4P50944 713 aa4.23□□□□□ -1.73
YML040WYML040W YNR048WP53740 393 aa4.23□□□□□ -1.73
YML040WYML040W YNR068CP53754 272 aa4.23□□□□□ -1.73
YML040WYML040W SNA4Q07549 140 aa4.23□□□□□ -1.73
YML040WYML040W SGT1Q08446 395 aa4.23□□□□□ -1.73
YML040WYML040W SRL2Q12020 392 aa4.23□□□□□ -1.73
YML040WYML040W YPR022CQ12139 1133 aa4.23□□□□□ -1.73
YML040WYML040W RNH203Q12338 110 aa4.23□□□□□ -1.73
YML040WYML040W SRN2Q99176 213 aa4.23□□□□□ -1.73
YML040WYML040W SCH9P11792 824 aaKnown RBP4.22□□□□□ -1.73
YML040WYML040W RNA14P25298 677 aaKnown RBP4.22□□□□□ -1.73
YML040WYML040W RDS1P25611 832 aa4.22□□□□□ -1.73
YML040WYML040W TIP1P27654 210 aaPredicted RBP4.22□□□□□ -1.73
YML040WYML040W CRM1P30822 1084 aaKnown RBP4.22□□□□□ -1.73
YML040WYML040W TRS65P32893 560 aa4.22□□□□□ -1.73
YML040WYML040W LOS1P33418 1100 aaPredicted RBP4.22□□□□□ -1.73
YML040WYML040W RRF1P38771 230 aa4.22□□□□□ -1.73
YML040WYML040W PCF11P39081 626 aaPredicted RBP4.22□□□□□ -1.73
YML040WYML040W SHO1P40073 367 aa4.22□□□□□ -1.73
YML040WYML040W YIL169CP40442 995 aa4.22□□□□□ -1.73
YML040WYML040W CUE3P53137 624 aaKnown RBP4.22□□□□□ -1.73
YML040WYML040W FRE4P53746 719 aa4.22□□□□□ -1.73
YML040WYML040W RSN1Q03516 953 aa4.22□□□□□ -1.73
YML040WYML040W NUP53Q03790 475 aa4.22□□□□□ -1.73
YML040WYML040W ERP1Q05359 219 aaKnown RBP4.22□□□□□ -1.73
YML040WYML040W REX4Q08237 289 aa4.22□□□□□ -1.73
YML040WYML040W NBL1Q3E7Y6 73 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms