RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	CTR86	P25355	563 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	KRE9	P39005	276 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	CCT4	P39078	528 aa	Known RBP	4.12	□□□□□ -1.75
HRT3	YLR097C	YFL067W	P43537	175 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	LAM5	P43560	674 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	PHO86	P46956	311 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	TOM22	P49334	152 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	YNR048W	P53740	393 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	OCA2	P53949	197 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	GYL1	Q04322	720 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	HEL2	Q05580	639 aa	Known RBP	4.12	□□□□□ -1.75
HRT3	YLR097C	YTH1	Q06102	208 aa	Predicted RBP	4.12	□□□□□ -1.75
HRT3	YLR097C	DCI1	Q08558	271 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	GPM3	Q12326	303 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	ORT1	Q12375	292 aa		4.12	□□□□□ -1.75
HRT3	YLR097C	TEF1	P02994	458 aa	Known RBP	4.11	□□□□□ -1.75
HRT3	YLR097C	LSB5	P25369	354 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	SPS22	P25380	463 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	LTV1	P34078	463 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	TIF5	P38431	405 aa	Known RBP	4.11	□□□□□ -1.75
HRT3	YLR097C	YHR218W	P38899	603 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	SER3	P40054	469 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	VHS2	P40463	436 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	BET5	Q03630	159 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	SKI7	Q08491	747 aa	Predicted RBP	4.11	□□□□□ -1.75
HRT3	YLR097C	THP3	Q12049	470 aa	Known RBP	4.11	□□□□□ -1.75
HRT3	YLR097C	YCL021W-A	Q96VH3	125 aa		4.11	□□□□□ -1.75
HRT3	YLR097C	CHS1	P08004	1131 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	HEM15	P16622	393 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	CPR3	P25719	182 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	CDC60	P26637	1090 aa	Known RBP	4.1	□□□□□ -1.75
HRT3	YLR097C	SWH1	P35845	1188 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	RIB5	P38145	238 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	YAL037W	P39728	267 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	OAZ1	Q02803	292 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	GIP3	Q03016	1276 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	RSN1	Q03516	953 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	UAF30	Q08747	228 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	RRP12	Q12754	1228 aa	Known RBP	4.1	□□□□□ -1.75
HRT3	YLR097C	RAD61	Q99359	647 aa		4.1	□□□□□ -1.75
HRT3	YLR097C	ADE4	P04046	510 aa	Known RBP	4.09	□□□□□ -1.75
HRT3	YLR097C	MIX23	P38162	196 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	RRP4	P38792	359 aa	Known RBP	4.09	□□□□□ -1.75
HRT3	YLR097C	OST1	P41543	476 aa	Known RBP	4.09	□□□□□ -1.75
HRT3	YLR097C	YJL055W	P47044	245 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	GOR1	P53839	350 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	IMP4	P53941	290 aa	Known RBP	4.09	□□□□□ -1.75
HRT3	YLR097C	GPI15	P53961	229 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	YMR181C	Q03231	154 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	RRN11	Q04712	507 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	SPE3	Q12074	293 aa	Known RBP	4.09	□□□□□ -1.75
HRT3	YLR097C	RMD5	Q12508	421 aa		4.09	□□□□□ -1.75
HRT3	YLR097C	ILV5	P06168	395 aa	Known RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	ARO3	P14843	370 aa	Known RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	MNE1	P24720	663 aa		4.08	□□□□□ -1.76
HRT3	YLR097C	ITR1	P30605	584 aa		4.08	□□□□□ -1.76
HRT3	YLR097C	NIP1	P32497	812 aa	Known RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	ASC1	P38011	319 aa	Known RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	ZTA1	P38230	334 aa	Known RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	PCF11	P39081	626 aa	Predicted RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	LCB2	P40970	561 aa		4.08	□□□□□ -1.76
HRT3	YLR097C	RPN9	Q04062	393 aa	Known RBP	4.08	□□□□□ -1.76
HRT3	YLR097C	YLR108C	Q12259	485 aa		4.08	□□□□□ -1.76
HRT3	YLR097C	ATG34	Q12292	412 aa		4.08	□□□□□ -1.76
HRT3	YLR097C	COX3	P00420	269 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	KKQ8	P36004	724 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	OLA1	P38219	394 aa	Known RBP	4.07	□□□□□ -1.76
HRT3	YLR097C	FAA2	P39518	744 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	PHB2	P50085	310 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	PRP42	Q03776	544 aa	Known RBP	4.07	□□□□□ -1.76
HRT3	YLR097C	YLR456W	Q06199	204 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	ESA1	Q08649	445 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	RUP1	Q12242	671 aa		4.07	□□□□□ -1.76
HRT3	YLR097C	PAR32	Q12515	295 aa	Known RBP	4.07	□□□□□ -1.76
HRT3	YLR097C	SLY1	P22213	666 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	RAD57	P25301	460 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	MDL1	P33310	695 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	FAD1	P38913	306 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	GDI1	P39958	451 aa	Known RBP	4.06	□□□□□ -1.76
HRT3	YLR097C	BOR1	P53838	576 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	URH1	Q04179	340 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	YER078W-A	Q3E7A2	54 aa		4.06	□□□□□ -1.76
HRT3	YLR097C	CBS2	P14905	389 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	SPO12	P17123	173 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	CPR4	P25334	318 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	RIM1	P32445	135 aa	Known RBP	4.05	□□□□□ -1.76
HRT3	YLR097C	SDH3	P33421	198 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	HEL1	P36113	551 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	MTC6	P38849	526 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	GAT2	P40209	560 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	JEM1	P40358	645 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	YPS6	P40583	537 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	WWM1	P43582	211 aa	Known RBP	4.05	□□□□□ -1.76
HRT3	YLR097C	PIB2	P53191	635 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	RCF1	Q03713	159 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	PPM1	Q04081	328 aa		4.05	□□□□□ -1.76
HRT3	YLR097C	SNX3	Q08826	162 aa	Known RBP	4.05	□□□□□ -1.76
HRT3	YLR097C	RPN5	Q12250	445 aa	Known RBP	4.05	□□□□□ -1.76
HRT3	YLR097C	HSP82	P02829	709 aa	Known RBP	4.04	□□□□□ -1.76
HRT3	YLR097C	PDE2	P06776	526 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms