RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C SPS22P25380 463 aa2.68□□□□□ -1.98
NYV1YLR093C HXT3P32466 567 aaKnown RBP2.68□□□□□ -1.98
NYV1YLR093C RML2P32611 393 aa2.68□□□□□ -1.98
NYV1YLR093C APE3P37302 537 aaKnown RBP2.68□□□□□ -1.98
NYV1YLR093C THI2P38141 450 aa2.68□□□□□ -1.98
NYV1YLR093C ALG5P40350 334 aa2.68□□□□□ -1.98
NYV1YLR093C SIM1P40472 476 aa2.68□□□□□ -1.98
NYV1YLR093C PRM5P40476 318 aa2.68□□□□□ -1.98
NYV1YLR093C ATP22P50273 684 aaPredicted RBP2.68□□□□□ -1.98
NYV1YLR093C ZPR1P53303 486 aaKnown RBP2.68□□□□□ -1.98
NYV1YLR093C GOR1P53839 350 aa2.68□□□□□ -1.98
NYV1YLR093C KAP120Q02932 1032 aa2.68□□□□□ -1.98
NYV1YLR093C ODC1Q03028 310 aa2.68□□□□□ -1.98
NYV1YLR093C MMR1Q06324 491 aa2.68□□□□□ -1.98
NYV1YLR093C SMF3Q12078 473 aaPredicted RBP2.68□□□□□ -1.98
NYV1YLR093C GPM3Q12326 303 aa2.68□□□□□ -1.98
NYV1YLR093C SKS1Q12505 502 aa2.68□□□□□ -1.98
NYV1YLR093C YDL007C-AQ2V2Q0 85 aa2.68□□□□□ -1.98
NYV1YLR093C AFI1Q99222 893 aa2.68□□□□□ -1.98
NYV1YLR093C SGS1P35187 1447 aa2.68□□□□□ -1.98
NYV1YLR093C MES1P00958 751 aaKnown RBP2.67□□□□□ -1.98
NYV1YLR093C IDH2P28241 369 aaKnown RBP2.67□□□□□ -1.98
NYV1YLR093C HEL1P36113 551 aa2.67□□□□□ -1.98
NYV1YLR093C AFG3P39925 761 aa2.67□□□□□ -1.98
NYV1YLR093C EFM4P40516 257 aa2.67□□□□□ -1.98
NYV1YLR093C CAK1P43568 368 aaPredicted RBP2.67□□□□□ -1.98
NYV1YLR093C YJL055WP47044 245 aa2.67□□□□□ -1.98
NYV1YLR093C URB2P47108 1174 aa2.67□□□□□ -1.98
NYV1YLR093C IPI3P53877 555 aa2.67□□□□□ -1.98
NYV1YLR093C PRP42Q03776 544 aaKnown RBP2.67□□□□□ -1.98
NYV1YLR093C GYL1Q04322 720 aa2.67□□□□□ -1.98
NYV1YLR093C VTA1Q06263 330 aa2.67□□□□□ -1.98
NYV1YLR093C CUE5Q08412 411 aaKnown RBP2.67□□□□□ -1.98
NYV1YLR093C YPL199CQ08954 240 aa2.67□□□□□ -1.98
NYV1YLR093C SPE3Q12074 293 aaKnown RBP2.67□□□□□ -1.98
NYV1YLR093C NFI1Q12216 726 aa2.67□□□□□ -1.98
NYV1YLR093C RPL3P14126 387 aaKnown RBP2.66□□□□□ -1.98
NYV1YLR093C POT1P27796 417 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
NYV1YLR093C YME2P32843 850 aa2.66□□□□□ -1.98
NYV1YLR093C FYV8P46949 817 aaKnown RBP2.66□□□□□ -1.98
NYV1YLR093C FMS1P50264 508 aa2.66□□□□□ -1.98
NYV1YLR093C YPL107WQ02873 248 aa2.66□□□□□ -1.98
NYV1YLR093C HOT1Q03213 719 aa2.66□□□□□ -1.98
NYV1YLR093C PDS5Q04264 1277 aa2.66□□□□□ -1.98
NYV1YLR093C DON1Q05610 365 aa2.66□□□□□ -1.98
NYV1YLR093C UAF30Q08747 228 aa2.66□□□□□ -1.98
NYV1YLR093C RPN5Q12250 445 aaKnown RBP2.66□□□□□ -1.98
NYV1YLR093C FRE6Q12473 712 aa2.66□□□□□ -1.98
NYV1YLR093C RPL31BP0C2H9 113 aaKnown RBP2.65□□□□□ -1.99
NYV1YLR093C ATP11P32453 318 aa2.65□□□□□ -1.99
NYV1YLR093C TFB1P32776 642 aa2.65□□□□□ -1.99
NYV1YLR093C LTV1P34078 463 aa2.65□□□□□ -1.99
NYV1YLR093C UIP5P36137 443 aa2.65□□□□□ -1.99
NYV1YLR093C MSG5P38590 489 aa2.65□□□□□ -1.99
NYV1YLR093C MSR1P38714 643 aa2.65□□□□□ -1.99
NYV1YLR093C OST1P41543 476 aaKnown RBP2.65□□□□□ -1.99
NYV1YLR093C YGR111WP53265 400 aa2.65□□□□□ -1.99
NYV1YLR093C SLG1P54867 378 aa2.65□□□□□ -1.99
NYV1YLR093C MRP51Q02950 344 aa2.65□□□□□ -1.99
NYV1YLR093C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
NYV1YLR093C FAB1P34756 2278 aa2.65□□□□□ -1.99
NYV1YLR093C RPL1AP0CX43 217 aaKnown RBP2.64□□□□□ -1.99
NYV1YLR093C RPL1BP0CX44 217 aaKnown RBP2.64□□□□□ -1.99
NYV1YLR093C VMA2P16140 517 aaKnown RBP2.64□□□□□ -1.99
NYV1YLR093C PPH22P23595 377 aa2.64□□□□□ -1.99
NYV1YLR093C YCR100CP25606 316 aa2.64□□□□□ -1.99
NYV1YLR093C SLM4P38247 162 aa2.64□□□□□ -1.99
NYV1YLR093C SIF2P38262 535 aa2.64□□□□□ -1.99
NYV1YLR093C SER3P40054 469 aa2.64□□□□□ -1.99
NYV1YLR093C TOM22P49334 152 aa2.64□□□□□ -1.99
NYV1YLR093C MNP1P53163 194 aaPredicted RBP2.64□□□□□ -1.99
NYV1YLR093C EOS1P53938 366 aa2.64□□□□□ -1.99
NYV1YLR093C SKO1Q02100 647 aa2.64□□□□□ -1.99
NYV1YLR093C YML133CQ03099 1374 aa2.63□□□□□ -1.99
NYV1YLR093C YLL067CQ07888 1374 aa2.63□□□□□ -1.99
NYV1YLR093C YLL066CQ99208 1374 aa2.63□□□□□ -1.99
NYV1YLR093C GEX1P25596 615 aa2.63□□□□□ -1.99
NYV1YLR093C NIP100P33420 868 aa2.63□□□□□ -1.99
NYV1YLR093C LAS1P36146 502 aaPredicted RBP2.63□□□□□ -1.99
NYV1YLR093C ADH5P38113 351 aaKnown RBP2.63□□□□□ -1.99
NYV1YLR093C RRF1P38771 230 aa2.63□□□□□ -1.99
NYV1YLR093C YHR054CP38780 354 aa2.63□□□□□ -1.99
NYV1YLR093C KEL1P38853 1164 aaKnown RBP2.63□□□□□ -1.99
NYV1YLR093C POP2P39008 433 aa2.63□□□□□ -1.99
NYV1YLR093C YMR147WP40218 223 aaKnown RBP2.63□□□□□ -1.99
NYV1YLR093C NAS2P40555 220 aa2.63□□□□□ -1.99
NYV1YLR093C ECM27P47144 725 aa2.63□□□□□ -1.99
NYV1YLR093C COS5P47187 383 aa2.63□□□□□ -1.99
NYV1YLR093C SSN8P47821 323 aa2.63□□□□□ -1.99
NYV1YLR093C GPI8P49018 411 aa2.63□□□□□ -1.99
NYV1YLR093C RPT4P53549 437 aaKnown RBP2.63□□□□□ -1.99
NYV1YLR093C PNG1Q02890 363 aa2.63□□□□□ -1.99
NYV1YLR093C ACL4Q03771 387 aa2.63□□□□□ -1.99
NYV1YLR093C COS7Q07788 383 aa2.63□□□□□ -1.99
NYV1YLR093C SIL1Q08199 421 aa2.63□□□□□ -1.99
NYV1YLR093C RRD2Q12461 358 aa2.63□□□□□ -1.99
NYV1YLR093C YBL111CQ3E7Y5 667 aa2.63□□□□□ -1.99
NYV1YLR093C COR1P07256 457 aa2.62□□□□□ -1.99
NYV1YLR093C YAR066WP0CX18 203 aa2.62□□□□□ -1.99
NYV1YLR093C YHR214WP0CX19 203 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms