RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C SSU1P41930 458 aa2.44□□□□□ -2.02
AFB1YLR040C HMS2P47175 358 aa2.44□□□□□ -2.02
AFB1YLR040C HER2Q03557 464 aa2.44□□□□□ -2.02
AFB1YLR040C ARX1Q03862 593 aaKnown RBP2.44□□□□□ -2.02
AFB1YLR040C RMD5Q12508 421 aa2.44□□□□□ -2.02
AFB1YLR040C RTP1Q12751 981 aa2.44□□□□□ -2.02
AFB1YLR040C TRP1P00912 224 aa2.43□□□□□ -2.02
AFB1YLR040C ARG4P04076 463 aaPredicted RBP2.43□□□□□ -2.02
AFB1YLR040C CDC31P06704 161 aaKnown RBP2.43□□□□□ -2.02
AFB1YLR040C RVS161P25343 265 aaKnown RBP2.43□□□□□ -2.02
AFB1YLR040C CTR86P25355 563 aa2.43□□□□□ -2.02
AFB1YLR040C LSB5P25369 354 aa2.43□□□□□ -2.02
AFB1YLR040C RHB1P25378 209 aa2.43□□□□□ -2.02
AFB1YLR040C RPN12P32496 274 aa2.43□□□□□ -2.02
AFB1YLR040C FMS1P50264 508 aa2.43□□□□□ -2.02
AFB1YLR040C CWC25P53854 179 aaKnown RBP2.43□□□□□ -2.02
AFB1YLR040C FDH1Q08911 376 aa2.43□□□□□ -2.02
AFB1YLR040C ISN1Q99312 450 aa2.43□□□□□ -2.02
AFB1YLR040C INH1P01097 85 aa2.42□□□□□ -2.02
AFB1YLR040C KRE2P27809 442 aa2.42□□□□□ -2.02
AFB1YLR040C ARA1P38115 344 aa2.42□□□□□ -2.02
AFB1YLR040C BRO1P48582 844 aa2.42□□□□□ -2.02
AFB1YLR040C PHB2P50085 310 aa2.42□□□□□ -2.02
AFB1YLR040C YGL039WP53183 348 aaKnown RBP2.42□□□□□ -2.02
AFB1YLR040C YGR250CP53316 781 aaKnown RBP2.42□□□□□ -2.02
AFB1YLR040C SUB1P54000 292 aaKnown RBP2.42□□□□□ -2.02
AFB1YLR040C BET5Q03630 159 aa2.42□□□□□ -2.02
AFB1YLR040C YMR155WQ03795 547 aa2.42□□□□□ -2.02
AFB1YLR040C YLR287CQ05881 355 aa2.42□□□□□ -2.02
AFB1YLR040C RKM1Q08961 583 aaPredicted RBP2.42□□□□□ -2.02
AFB1YLR040C VAM3Q12241 283 aa2.42□□□□□ -2.02
AFB1YLR040C WTM1Q12363 437 aaKnown RBP2.42□□□□□ -2.02
AFB1YLR040C SOD1P00445 154 aaKnown RBP2.41□□□□□ -2.02
AFB1YLR040C SPO12P17123 173 aa2.41□□□□□ -2.02
AFB1YLR040C RAD57P25301 460 aa2.41□□□□□ -2.02
AFB1YLR040C BEM1P29366 551 aa2.41□□□□□ -2.02
AFB1YLR040C HIR2P32480 875 aa2.41□□□□□ -2.02
AFB1YLR040C MUD1P32605 298 aaKnown RBP2.41□□□□□ -2.02
AFB1YLR040C NPL6P32832 435 aa2.41□□□□□ -2.02
AFB1YLR040C YME2P32843 850 aa2.41□□□□□ -2.02
AFB1YLR040C SOR1P35497 357 aaKnown RBP2.41□□□□□ -2.02
AFB1YLR040C KKQ8P36004 724 aa2.41□□□□□ -2.02
AFB1YLR040C YHR131CP38835 850 aa2.41□□□□□ -2.02
AFB1YLR040C GPD2P41911 440 aaKnown RBP2.41□□□□□ -2.02
AFB1YLR040C COS5P47187 383 aa2.41□□□□□ -2.02
AFB1YLR040C AZR1P50080 613 aa2.41□□□□□ -2.02
AFB1YLR040C MDM1Q01846 1127 aa2.41□□□□□ -2.02
AFB1YLR040C SOR2Q07786 357 aa2.41□□□□□ -2.02
AFB1YLR040C COS7Q07788 383 aa2.41□□□□□ -2.02
AFB1YLR040C SKI7Q08491 747 aaPredicted RBP2.41□□□□□ -2.02
AFB1YLR040C YRM1Q12340 786 aa2.41□□□□□ -2.02
AFB1YLR040C CLB3P24870 427 aa2.4□□□□□ -2.03
AFB1YLR040C SMY1P32364 656 aaKnown RBP2.4□□□□□ -2.03
AFB1YLR040C KAR9P32526 644 aa2.4□□□□□ -2.03
AFB1YLR040C MRPL10P36520 322 aa2.4□□□□□ -2.03
AFB1YLR040C LSM5P40089 93 aaKnown RBP2.4□□□□□ -2.03
AFB1YLR040C YGL138CP53122 345 aa2.4□□□□□ -2.03
AFB1YLR040C SHY1P53266 389 aa2.4□□□□□ -2.03
AFB1YLR040C PEX25Q02969 394 aa2.4□□□□□ -2.03
AFB1YLR040C RSN1Q03516 953 aa2.4□□□□□ -2.03
AFB1YLR040C RRP45Q05636 305 aaKnown RBP2.4□□□□□ -2.03
AFB1YLR040C REX4Q08237 289 aa2.4□□□□□ -2.03
AFB1YLR040C SGT1Q08446 395 aa2.4□□□□□ -2.03
AFB1YLR040C CLC1P17891 233 aa2.39□□□□□ -2.03
AFB1YLR040C CSE2P33308 149 aa2.39□□□□□ -2.03
AFB1YLR040C UTH1P36135 365 aa2.39□□□□□ -2.03
AFB1YLR040C APE3P37302 537 aaKnown RBP2.39□□□□□ -2.03
AFB1YLR040C NTC20P38302 140 aaPredicted RBP2.39□□□□□ -2.03
AFB1YLR040C PHO86P46956 311 aa2.39□□□□□ -2.03
AFB1YLR040C MDG1P53885 366 aa2.39□□□□□ -2.03
AFB1YLR040C GPI15P53961 229 aa2.39□□□□□ -2.03
AFB1YLR040C YMR027WQ04371 470 aa2.39□□□□□ -2.03
AFB1YLR040C HSP42Q12329 375 aa2.39□□□□□ -2.03
AFB1YLR040C AHC1Q12433 566 aa2.39□□□□□ -2.03
AFB1YLR040C PCL1P24867 279 aa2.38□□□□□ -2.03
AFB1YLR040C YAL037WP39728 267 aa2.38□□□□□ -2.03
AFB1YLR040C JLP2P40206 208 aa2.38□□□□□ -2.03
AFB1YLR040C OAZ1Q02803 292 aa2.38□□□□□ -2.03
AFB1YLR040C GIP3Q03016 1276 aa2.38□□□□□ -2.03
AFB1YLR040C TSA2Q04120 196 aa2.38□□□□□ -2.03
AFB1YLR040C ROY1Q04847 553 aa2.38□□□□□ -2.03
AFB1YLR040C SNT309Q06091 175 aaPredicted RBP2.38□□□□□ -2.03
AFB1YLR040C RRG1Q12167 365 aaPredicted RBP2.38□□□□□ -2.03
AFB1YLR040C SCEIP03882 235 aa2.37□□□□□ -2.03
AFB1YLR040C SRV2P17555 526 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C SPO7P18410 259 aa2.37□□□□□ -2.03
AFB1YLR040C YCR051WP25631 222 aa2.37□□□□□ -2.03
AFB1YLR040C POP5P28005 173 aa2.37□□□□□ -2.03
AFB1YLR040C PRS1P32895 427 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C RRP4P38792 359 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C NAB3P38996 802 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
AFB1YLR040C YJR085CP47131 105 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C RHO5P53879 331 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C BNI5P53890 448 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C SKO1Q02100 647 aa2.37□□□□□ -2.03
AFB1YLR040C TAF12Q03761 539 aa2.37□□□□□ -2.03
AFB1YLR040C BCH1Q05029 724 aa2.37□□□□□ -2.03
AFB1YLR040C DIS3Q08162 1001 aaKnown RBP2.37□□□□□ -2.03
AFB1YLR040C SRL2Q12020 392 aa2.37□□□□□ -2.03
AFB1YLR040C SCM3Q12334 223 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms