RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SUI3P09064 285 aaKnown RBP3.09□□□□□ -1.91
SDO1YLR022C MTF2P10849 440 aa3.09□□□□□ -1.91
SDO1YLR022C NAM9P27929 486 aa3.09□□□□□ -1.91
SDO1YLR022C CDC13P32797 924 aaKnown RBP3.09□□□□□ -1.91
SDO1YLR022C PEX5P35056 612 aa3.09□□□□□ -1.91
SDO1YLR022C YHR210CP38893 341 aa3.09□□□□□ -1.91
SDO1YLR022C CCT6P39079 546 aa3.09□□□□□ -1.91
SDO1YLR022C SER3P40054 469 aa3.09□□□□□ -1.91
SDO1YLR022C NDE1P40215 560 aa3.09□□□□□ -1.91
SDO1YLR022C CTF18P49956 741 aa3.09□□□□□ -1.91
SDO1YLR022C VAC7P53950 1165 aa3.09□□□□□ -1.91
SDO1YLR022C IZH1Q03419 316 aa3.09□□□□□ -1.91
SDO1YLR022C YDR131CQ03899 556 aa3.09□□□□□ -1.91
SDO1YLR022C ARO80Q04052 950 aa3.09□□□□□ -1.91
SDO1YLR022C ECI1Q05871 280 aa3.09□□□□□ -1.91
SDO1YLR022C MDM30Q05930 598 aa3.09□□□□□ -1.91
SDO1YLR022C YPR114WQ06107 315 aa3.09□□□□□ -1.91
SDO1YLR022C VAM6Q07468 1049 aa3.09□□□□□ -1.91
SDO1YLR022C VPS68Q12016 184 aa3.09□□□□□ -1.91
SDO1YLR022C YLR112WQ12130 139 aa3.09□□□□□ -1.91
SDO1YLR022C JIP3O13555 125 aa3.08□□□□□ -1.92
SDO1YLR022C APA1P16550 321 aaKnown RBP3.08□□□□□ -1.92
SDO1YLR022C CDC42P19073 191 aa3.08□□□□□ -1.92
SDO1YLR022C MNE1P24720 663 aa3.08□□□□□ -1.92
SDO1YLR022C STE50P25344 346 aa3.08□□□□□ -1.92
SDO1YLR022C NRP1P32770 719 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SDO1YLR022C YBR138CP38277 524 aa3.08□□□□□ -1.92
SDO1YLR022C EFM2P38347 419 aa3.08□□□□□ -1.92
SDO1YLR022C LRP1P38801 184 aaKnown RBP3.08□□□□□ -1.92
SDO1YLR022C YND1P40009 630 aa3.08□□□□□ -1.92
SDO1YLR022C CPR7P47103 393 aa3.08□□□□□ -1.92
SDO1YLR022C TRM9P49957 279 aa3.08□□□□□ -1.92
SDO1YLR022C GIS2P53849 153 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92 RIP-Chip
SDO1YLR022C INP2Q03824 705 aa3.08□□□□□ -1.92
SDO1YLR022C SXM1Q04175 944 aaKnown RBP3.08□□□□□ -1.92
SDO1YLR022C GPN2Q08726 347 aaPredicted RBP3.08□□□□□ -1.92
SDO1YLR022C TRM8Q12009 286 aa3.08□□□□□ -1.92
SDO1YLR022C YDR056CQ12025 205 aa3.08□□□□□ -1.92
SDO1YLR022C YLR049CQ12110 428 aa3.08□□□□□ -1.92
SDO1YLR022C RRP12Q12754 1228 aaKnown RBP3.08□□□□□ -1.92
SDO1YLR022C AI5_BETAQ9ZZX0 354 aa3.08□□□□□ -1.92
SDO1YLR022C YER145C-AA0A023PYF4 145 aa3.07□□□□□ -1.92
SDO1YLR022C MRPL8P22353 238 aa3.07□□□□□ -1.92
SDO1YLR022C IMG1P25626 169 aa3.07□□□□□ -1.92
SDO1YLR022C LHS1P36016 881 aa3.07□□□□□ -1.92
SDO1YLR022C LYS1P38998 373 aaRIP-Chip data3.07□□□□□ -1.92not detected
SDO1YLR022C YER130CP39959 443 aa3.07□□□□□ -1.92
SDO1YLR022C PAN6P40459 309 aa3.07□□□□□ -1.92
SDO1YLR022C SMK1P41808 388 aa3.07□□□□□ -1.92
SDO1YLR022C ERR3P42222 437 aa3.07□□□□□ -1.92
SDO1YLR022C RPC17P47076 161 aa3.07□□□□□ -1.92
SDO1YLR022C DCP2P53550 970 aaKnown RBP3.07□□□□□ -1.92
SDO1YLR022C IGO1P53897 168 aa3.07□□□□□ -1.92
SDO1YLR022C ESBP6P53918 673 aa3.07□□□□□ -1.92
SDO1YLR022C ASI1P54074 624 aa3.07□□□□□ -1.92
SDO1YLR022C GTR1Q00582 310 aa3.07□□□□□ -1.92
SDO1YLR022C DIG1Q03063 452 aaKnown RBP3.07□□□□□ -1.92
SDO1YLR022C YMR160WQ03823 816 aa3.07□□□□□ -1.92
SDO1YLR022C GRC3Q07845 632 aa3.07□□□□□ -1.92
SDO1YLR022C RLP24Q07915 199 aaKnown RBP3.07□□□□□ -1.92
SDO1YLR022C PLB3Q08108 686 aa3.07□□□□□ -1.92
SDO1YLR022C NRT1Q08485 598 aa3.07□□□□□ -1.92
SDO1YLR022C RAX1Q08760 435 aa3.07□□□□□ -1.92
SDO1YLR022C SWT1Q12104 458 aa3.07□□□□□ -1.92
SDO1YLR022C YOR342CQ12182 319 aa3.07□□□□□ -1.92
SDO1YLR022C PMS1P14242 873 aa3.06□□□□□ -1.92
SDO1YLR022C YCR102CP25608 368 aa3.06□□□□□ -1.92
SDO1YLR022C PSO2P30620 661 aa3.06□□□□□ -1.92
SDO1YLR022C MRP4P32902 394 aa3.06□□□□□ -1.92
SDO1YLR022C SLC1P33333 303 aa3.06□□□□□ -1.92
SDO1YLR022C SKN1P33336 771 aa3.06□□□□□ -1.92
SDO1YLR022C RSM22P36056 628 aa3.06□□□□□ -1.92
SDO1YLR022C MRPL15P36523 253 aa3.06□□□□□ -1.92
SDO1YLR022C MRPL36P36531 177 aa3.06□□□□□ -1.92
SDO1YLR022C ADE17P38009 592 aaKnown RBP3.06□□□□□ -1.92
SDO1YLR022C SRP72P38688 640 aaKnown RBP3.06□□□□□ -1.92
SDO1YLR022C NPR3P38742 1146 aa3.06□□□□□ -1.92
SDO1YLR022C PUG1P40100 303 aa3.06□□□□□ -1.92
SDO1YLR022C SSU1P41930 458 aa3.06□□□□□ -1.92
SDO1YLR022C YFR018CP43599 363 aa3.06□□□□□ -1.92
SDO1YLR022C YFR020WP43600 232 aa3.06□□□□□ -1.92
SDO1YLR022C YGL108CP53139 140 aa3.06□□□□□ -1.92
SDO1YLR022C SWC4P53201 476 aa3.06□□□□□ -1.92
SDO1YLR022C ARE2P53629 642 aaKnown RBP3.06□□□□□ -1.92
SDO1YLR022C MRPL13Q02204 264 aa3.06□□□□□ -1.92
SDO1YLR022C RRN11Q04712 507 aa3.06□□□□□ -1.92
SDO1YLR022C YMR254CQ04838 102 aa3.06□□□□□ -1.92
SDO1YLR022C YMR317WQ04893 1140 aa3.06□□□□□ -1.92
SDO1YLR022C RRP45Q05636 305 aaKnown RBP3.06□□□□□ -1.92
SDO1YLR022C YTH1Q06102 208 aaPredicted RBP3.06□□□□□ -1.92
SDO1YLR022C YLR352WQ06479 807 aa3.06□□□□□ -1.92
SDO1YLR022C SWA2Q06677 668 aa3.06□□□□□ -1.92
SDO1YLR022C TLG2Q08144 397 aa3.06□□□□□ -1.92
SDO1YLR022C DIS3Q08162 1001 aaKnown RBP3.06□□□□□ -1.92
SDO1YLR022C HIS1P00498 297 aaKnown RBP3.05□□□□□ -1.92
SDO1YLR022C PHO2P07269 559 aa3.05□□□□□ -1.92
SDO1YLR022C CDC23P16522 626 aa3.05□□□□□ -1.92
SDO1YLR022C REC107P21651 314 aa3.05□□□□□ -1.92
SDO1YLR022C NUP120P35729 1037 aa3.05□□□□□ -1.92
SDO1YLR022C EBP2P36049 427 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms