RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C SIL1Q08199 421 aa3.64□□□□□ -1.83
RPF2YKR081C REX4Q08237 289 aa3.64□□□□□ -1.83
RPF2YKR081C ORT1Q12375 292 aa3.64□□□□□ -1.83
RPF2YKR081C SIN4P32259 974 aa3.63□□□□□ -1.83
RPF2YKR081C RFC3P38629 340 aa3.63□□□□□ -1.83
RPF2YKR081C HMS2P47175 358 aa3.63□□□□□ -1.83
RPF2YKR081C HSP42Q12329 375 aa3.63□□□□□ -1.83
RPF2YKR081C RTN2Q12443 393 aa3.63□□□□□ -1.83
RPF2YKR081C RTP1Q12751 981 aa3.63□□□□□ -1.83
RPF2YKR081C NFT1P0CE68 1218 aa3.62□□□□□ -1.83
RPF2YKR081C NAT1P12945 854 aaKnown RBP3.62□□□□□ -1.83
RPF2YKR081C NDE1P40215 560 aa3.62□□□□□ -1.83
RPF2YKR081C BET5Q03630 159 aa3.62□□□□□ -1.83
RPF2YKR081C RED1P14291 827 aa3.61□□□□□ -1.83
RPF2YKR081C CLB3P24870 427 aa3.61□□□□□ -1.83
RPF2YKR081C KRE2P27809 442 aa3.61□□□□□ -1.83
RPF2YKR081C POP5P28005 173 aa3.61□□□□□ -1.83
RPF2YKR081C RML2P32611 393 aa3.61□□□□□ -1.83
RPF2YKR081C TAF11Q04226 346 aa3.61□□□□□ -1.83
RPF2YKR081C RRP45Q05636 305 aaKnown RBP3.61□□□□□ -1.83
RPF2YKR081C SKI7Q08491 747 aaPredicted RBP3.61□□□□□ -1.83
RPF2YKR081C RMD5Q12508 421 aa3.61□□□□□ -1.83
RPF2YKR081C CTR86P25355 563 aa3.6□□□□□ -1.83
RPF2YKR081C ERG3P32353 365 aa3.6□□□□□ -1.83
RPF2YKR081C RPS0BP46654 252 aaKnown RBP3.6□□□□□ -1.83
RPF2YKR081C MDM30Q05930 598 aa3.6□□□□□ -1.83
RPF2YKR081C IRC25Q07951 179 aa3.6□□□□□ -1.83
RPF2YKR081C YOL159C-AQ3E769 90 aa3.6□□□□□ -1.83
RPF2YKR081C CYC3P06182 269 aa3.59□□□□□ -1.83
RPF2YKR081C SNT1P25357 1226 aa3.59□□□□□ -1.83
RPF2YKR081C RHB1P25378 209 aa3.59□□□□□ -1.83
RPF2YKR081C BEM1P29366 551 aa3.59□□□□□ -1.83
RPF2YKR081C KAR9P32526 644 aa3.59□□□□□ -1.83
RPF2YKR081C SAS3P34218 831 aa3.59□□□□□ -1.83
RPF2YKR081C NTC20P38302 140 aaPredicted RBP3.59□□□□□ -1.83
RPF2YKR081C PCF11P39081 626 aaPredicted RBP3.59□□□□□ -1.83
RPF2YKR081C COS5P47187 383 aa3.59□□□□□ -1.83
RPF2YKR081C SUB1P54000 292 aaKnown RBP3.59□□□□□ -1.83
RPF2YKR081C COS7Q07788 383 aa3.59□□□□□ -1.83
RPF2YKR081C RKM1Q08961 583 aaPredicted RBP3.59□□□□□ -1.83
RPF2YKR081C VAM3Q12241 283 aa3.59□□□□□ -1.83
RPF2YKR081C ILV5P06168 395 aaKnown RBP3.58□□□□□ -1.84
RPF2YKR081C SPO7P18410 259 aa3.58□□□□□ -1.84
RPF2YKR081C AZR1P50080 613 aa3.58□□□□□ -1.84
RPF2YKR081C TAF12Q03761 539 aa3.58□□□□□ -1.84
RPF2YKR081C SMY1P32364 656 aaKnown RBP3.57□□□□□ -1.84
RPF2YKR081C RPN12P32496 274 aa3.57□□□□□ -1.84
RPF2YKR081C YGL138CP53122 345 aa3.57□□□□□ -1.84
RPF2YKR081C GPI15P53961 229 aa3.57□□□□□ -1.84
RPF2YKR081C PGA3Q12746 312 aaKnown RBP3.57□□□□□ -1.84
RPF2YKR081C SCEIP03882 235 aa3.56□□□□□ -1.84
RPF2YKR081C SRV2P17555 526 aaKnown RBP3.56□□□□□ -1.84
RPF2YKR081C GEX1P25596 615 aa3.56□□□□□ -1.84
RPF2YKR081C HIR2P32480 875 aa3.56□□□□□ -1.84
RPF2YKR081C NPL6P32832 435 aa3.56□□□□□ -1.84
RPF2YKR081C MRPL10P36520 322 aa3.56□□□□□ -1.84
RPF2YKR081C APE3P37302 537 aaKnown RBP3.56□□□□□ -1.84
RPF2YKR081C YAL037WP39728 267 aa3.56□□□□□ -1.84
RPF2YKR081C JLP2P40206 208 aa3.56□□□□□ -1.84
RPF2YKR081C RHO5P53879 331 aaKnown RBP3.56□□□□□ -1.84
RPF2YKR081C HAL1Q01766 294 aa3.56□□□□□ -1.84
RPF2YKR081C TSA2Q04120 196 aa3.56□□□□□ -1.84
RPF2YKR081C SFI1Q12369 946 aa3.56□□□□□ -1.84
RPF2YKR081C CDC31P06704 161 aaKnown RBP3.55□□□□□ -1.84
RPF2YKR081C CLN1P20437 546 aa3.55□□□□□ -1.84
RPF2YKR081C PCL1P24867 279 aa3.55□□□□□ -1.84
RPF2YKR081C YME2P32843 850 aa3.55□□□□□ -1.84
RPF2YKR081C SOR1P35497 357 aaKnown RBP3.55□□□□□ -1.84
RPF2YKR081C UTH1P36135 365 aa3.55□□□□□ -1.84
RPF2YKR081C SSU1P41930 458 aa3.55□□□□□ -1.84
RPF2YKR081C BRO1P48582 844 aa3.55□□□□□ -1.84
RPF2YKR081C BCH1Q05029 724 aa3.55□□□□□ -1.84
RPF2YKR081C YLR287CQ05881 355 aa3.55□□□□□ -1.84
RPF2YKR081C COG4Q06096 861 aa3.55□□□□□ -1.84
RPF2YKR081C SOR2Q07786 357 aa3.55□□□□□ -1.84
RPF2YKR081C YRM1Q12340 786 aa3.55□□□□□ -1.84
RPF2YKR081C SPO12P17123 173 aa3.54□□□□□ -1.84
RPF2YKR081C RAD57P25301 460 aa3.54□□□□□ -1.84
RPF2YKR081C NAB3P38996 802 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
RPF2YKR081C SFH5P47008 294 aa3.54□□□□□ -1.84
RPF2YKR081C MDE1P47095 244 aa3.54□□□□□ -1.84
RPF2YKR081C PHB2P50085 310 aa3.54□□□□□ -1.84
RPF2YKR081C SKO1Q02100 647 aa3.54□□□□□ -1.84
RPF2YKR081C GIP3Q03016 1276 aa3.54□□□□□ -1.84
RPF2YKR081C ARX1Q03862 593 aaKnown RBP3.54□□□□□ -1.84
RPF2YKR081C SRL2Q12020 392 aa3.54□□□□□ -1.84
RPF2YKR081C REC107P21651 314 aa3.53□□□□□ -1.84
RPF2YKR081C GAB1P41733 394 aa3.53□□□□□ -1.84
RPF2YKR081C PHO86P46956 311 aa3.53□□□□□ -1.84
RPF2YKR081C OAZ1Q02803 292 aa3.53□□□□□ -1.84
RPF2YKR081C CUE5Q08412 411 aaKnown RBP3.53□□□□□ -1.84
RPF2YKR081C SNU66Q12420 587 aaPredicted RBP3.53□□□□□ -1.84
RPF2YKR081C INH1P01097 85 aa3.52□□□□□ -1.85
RPF2YKR081C NUP2P32499 720 aa3.52□□□□□ -1.85
RPF2YKR081C NFU1P32860 256 aa3.52□□□□□ -1.85
RPF2YKR081C CSE2P33308 149 aa3.52□□□□□ -1.85
RPF2YKR081C MMS4P38257 691 aa3.52□□□□□ -1.85
RPF2YKR081C NOC2P39744 710 aaKnown RBP3.52□□□□□ -1.85
RPF2YKR081C UTP18P40362 594 aaPredicted RBP3.52□□□□□ -1.85
RPF2YKR081C MTQ1P53944 314 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms