RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C MDM30Q05930 598 aa3.17□□□□□ -1.9
CTK2YJL006C RRG7Q08774 242 aaPredicted RBP3.17□□□□□ -1.9
CTK2YJL006C RKM1Q08961 583 aaPredicted RBP3.17□□□□□ -1.9
CTK2YJL006C YPR022CQ12139 1133 aa3.17□□□□□ -1.9
CTK2YJL006C VAM3Q12241 283 aa3.17□□□□□ -1.9
CTK2YJL006C SRV2P17555 526 aaKnown RBP3.16□□□□□ -1.9
CTK2YJL006C SPS22P25380 463 aa3.16□□□□□ -1.9
CTK2YJL006C HIR2P32480 875 aa3.16□□□□□ -1.9
CTK2YJL006C SWD3P38123 315 aa3.16□□□□□ -1.9
CTK2YJL006C YHR054CP38780 354 aa3.16□□□□□ -1.9
CTK2YJL006C LYS1P38998 373 aaRIP-Chip data3.16□□□□□ -1.9not detected
CTK2YJL006C FRE4P53746 719 aa3.16□□□□□ -1.9
CTK2YJL006C BNI5P53890 448 aaKnown RBP3.16□□□□□ -1.9
CTK2YJL006C ESA1Q08649 445 aa3.16□□□□□ -1.9
CTK2YJL006C TIM18Q08749 192 aa3.16□□□□□ -1.9
CTK2YJL006C TMS1Q12116 473 aa3.16□□□□□ -1.9
CTK2YJL006C PKH2Q12236 1081 aaKnown RBP3.16□□□□□ -1.9
CTK2YJL006C YLR108CQ12259 485 aa3.16□□□□□ -1.9
CTK2YJL006C RAD61Q99359 647 aa3.16□□□□□ -1.9
CTK2YJL006C RHB1P25378 209 aa3.15□□□□□ -1.91
CTK2YJL006C RPC53P25441 422 aa3.15□□□□□ -1.91
CTK2YJL006C BEM1P29366 551 aa3.15□□□□□ -1.91
CTK2YJL006C ITR1P30605 584 aa3.15□□□□□ -1.91
CTK2YJL006C SDH3P33421 198 aa3.15□□□□□ -1.91
CTK2YJL006C STB6P36085 766 aa3.15□□□□□ -1.91
CTK2YJL006C RIB5P38145 238 aa3.15□□□□□ -1.91
CTK2YJL006C YIL067CP40514 678 aa3.15□□□□□ -1.91
CTK2YJL006C OST1P41543 476 aaKnown RBP3.15□□□□□ -1.91
CTK2YJL006C LAM5P43560 674 aa3.15□□□□□ -1.91
CTK2YJL006C YNR048WP53740 393 aa3.15□□□□□ -1.91
CTK2YJL006C ELP3Q02908 557 aaKnown RBP3.15□□□□□ -1.91
CTK2YJL006C PBA1Q05778 276 aa3.15□□□□□ -1.91
CTK2YJL006C ERV2Q12284 196 aa3.15□□□□□ -1.91
CTK2YJL006C HRT3Q12347 344 aa3.15□□□□□ -1.91
CTK2YJL006C ORT1Q12375 292 aa3.15□□□□□ -1.91
CTK2YJL006C AFI1Q99222 893 aa3.15□□□□□ -1.91
CTK2YJL006C ARG4P04076 463 aaPredicted RBP3.14□□□□□ -1.91
CTK2YJL006C CPR4P25334 318 aa3.14□□□□□ -1.91
CTK2YJL006C URA7P28274 579 aaKnown RBP3.14□□□□□ -1.91
CTK2YJL006C HXT11P54862 567 aa3.14□□□□□ -1.91
CTK2YJL006C YMR181CQ03231 154 aa3.14□□□□□ -1.91
CTK2YJL006C REX4Q08237 289 aa3.14□□□□□ -1.91
CTK2YJL006C SGT1Q08446 395 aa3.14□□□□□ -1.91
CTK2YJL006C YDL012CQ12489 107 aa3.14□□□□□ -1.91
CTK2YJL006C HHF1P02309 103 aaKnown RBP3.13□□□□□ -1.91
CTK2YJL006C TEF1P02994 458 aaKnown RBP3.13□□□□□ -1.91
CTK2YJL006C CLN3P13365 580 aa3.13□□□□□ -1.91
CTK2YJL006C CTR86P25355 563 aa3.13□□□□□ -1.91
CTK2YJL006C SOR1P35497 357 aaKnown RBP3.13□□□□□ -1.91
CTK2YJL006C HMS2P47175 358 aa3.13□□□□□ -1.91
CTK2YJL006C SOR2Q07786 357 aa3.13□□□□□ -1.91
CTK2YJL006C SKI7Q08491 747 aaPredicted RBP3.13□□□□□ -1.91
CTK2YJL006C RMD5Q12508 421 aa3.13□□□□□ -1.91
CTK2YJL006C SCEIP03882 235 aa3.12□□□□□ -1.91
CTK2YJL006C SUP35P05453 685 aaKnown RBP3.12□□□□□ -1.91
CTK2YJL006C ERV1P27882 189 aa3.12□□□□□ -1.91
CTK2YJL006C SMY1P32364 656 aaKnown RBP3.12□□□□□ -1.91
CTK2YJL006C WWM1P43582 211 aaKnown RBP3.12□□□□□ -1.91
CTK2YJL006C RPT4P53549 437 aaKnown RBP3.12□□□□□ -1.91
CTK2YJL006C TOF1P53840 1238 aa3.12□□□□□ -1.91
CTK2YJL006C TAF12Q03761 539 aa3.12□□□□□ -1.91
CTK2YJL006C ERB1Q04660 807 aaKnown RBP3.12□□□□□ -1.91
CTK2YJL006C BUG1Q12191 341 aa3.12□□□□□ -1.91
CTK2YJL006C ILV5P06168 395 aaKnown RBP3.11□□□□□ -1.91
CTK2YJL006C URA4P20051 364 aa3.11□□□□□ -1.91
CTK2YJL006C SLY1P22213 666 aa3.11□□□□□ -1.91
CTK2YJL006C BRF1P29056 596 aa3.11□□□□□ -1.91
CTK2YJL006C DBF4P32325 704 aa3.11□□□□□ -1.91
CTK2YJL006C TFB1P32776 642 aa3.11□□□□□ -1.91
CTK2YJL006C MPE1P35728 441 aaKnown RBP3.11□□□□□ -1.91
CTK2YJL006C APE3P37302 537 aaKnown RBP3.11□□□□□ -1.91
CTK2YJL006C MMS4P38257 691 aa3.11□□□□□ -1.91
CTK2YJL006C REE1P40893 198 aa3.11□□□□□ -1.91
CTK2YJL006C CAK1P43568 368 aaPredicted RBP3.11□□□□□ -1.91
CTK2YJL006C RSN1Q03516 953 aa3.11□□□□□ -1.91
CTK2YJL006C BET5Q03630 159 aa3.11□□□□□ -1.91
CTK2YJL006C ACL4Q03771 387 aa3.11□□□□□ -1.91
CTK2YJL006C PPM1Q04081 328 aa3.11□□□□□ -1.91
CTK2YJL006C YMR130WQ04223 302 aa3.11□□□□□ -1.91
CTK2YJL006C TSR1Q07381 788 aaKnown RBP3.11□□□□□ -1.91
CTK2YJL006C DIS3Q08162 1001 aaKnown RBP3.11□□□□□ -1.91
CTK2YJL006C CLB1P24868 471 aa3.1□□□□□ -1.91
CTK2YJL006C ARO2P28777 376 aaKnown RBP3.1□□□□□ -1.91
CTK2YJL006C YBR137WP38276 179 aa3.1□□□□□ -1.91
CTK2YJL006C YAL037WP39728 267 aa3.1□□□□□ -1.91
CTK2YJL006C PRM5P40476 318 aa3.1□□□□□ -1.91
CTK2YJL006C NCA3P46955 337 aa3.1□□□□□ -1.91
CTK2YJL006C PHO86P46956 311 aa3.1□□□□□ -1.91
CTK2YJL006C MDG1P53885 366 aa3.1□□□□□ -1.91
CTK2YJL006C HOT1Q03213 719 aa3.1□□□□□ -1.91
CTK2YJL006C RMT2Q03305 412 aa3.1□□□□□ -1.91
CTK2YJL006C YLR345WQ06137 509 aa3.1□□□□□ -1.91
CTK2YJL006C DCS1Q06151 350 aa3.1□□□□□ -1.91
CTK2YJL006C MMR1Q06324 491 aa3.1□□□□□ -1.91
CTK2YJL006C SPO7P18410 259 aa3.09□□□□□ -1.91
CTK2YJL006C CLN1P20437 546 aa3.09□□□□□ -1.91
CTK2YJL006C CPR2P23285 205 aa3.09□□□□□ -1.91
CTK2YJL006C KKQ8P36004 724 aa3.09□□□□□ -1.91
CTK2YJL006C RRN10P38204 145 aa3.09□□□□□ -1.91
CTK2YJL006C SLM4P38247 162 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms