RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C ROT1Q03691 256 aa5.25□□□□□ -1.57
RPT6YGL048C ARX1Q03862 593 aaKnown RBP5.25□□□□□ -1.57
RPT6YGL048C YDR109CQ04585 715 aa5.25□□□□□ -1.57
RPT6YGL048C YLR345WQ06137 509 aa5.25□□□□□ -1.57
RPT6YGL048C PFA4Q12006 378 aa5.25□□□□□ -1.57
RPT6YGL048C YOL114CQ12322 202 aa5.25□□□□□ -1.57
RPT6YGL048C GCN1P33892 2672 aaKnown RBP5.25□□□□□ -1.57
RPT6YGL048C HFA1P32874 2273 aa5.25□□□□□ -1.57
RPT6YGL048C ARG80P07249 177 aa5.24□□□□□ -1.57
RPT6YGL048C FUM1P08417 488 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C ERG20P08524 352 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C HEM15P16622 393 aa5.24□□□□□ -1.57
RPT6YGL048C STE4P18851 423 aa5.24□□□□□ -1.57
RPT6YGL048C YPK2P18961 677 aa5.24□□□□□ -1.57
RPT6YGL048C ATP12P22135 325 aa5.24□□□□□ -1.57
RPT6YGL048C YCR099CP25657 155 aa5.24□□□□□ -1.57
RPT6YGL048C ERG3P32353 365 aa5.24□□□□□ -1.57
RPT6YGL048C NRP1P32770 719 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
RPT6YGL048C DUT1P33317 147 aa5.24□□□□□ -1.57
RPT6YGL048C NUF2P33895 451 aa5.24□□□□□ -1.57
RPT6YGL048C YHI9P38765 294 aa5.24□□□□□ -1.57
RPT6YGL048C CCT4P39078 528 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C AGE2P40529 298 aa5.24□□□□□ -1.57
RPT6YGL048C CFD1P40558 293 aa5.24□□□□□ -1.57
RPT6YGL048C SMK1P41808 388 aa5.24□□□□□ -1.57
RPT6YGL048C YJL107CP42947 387 aa5.24□□□□□ -1.57
RPT6YGL048C GCN20P43535 752 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C GAT1P43574 510 aa5.24□□□□□ -1.57
RPT6YGL048C SGF73P53165 657 aa5.24□□□□□ -1.57
RPT6YGL048C ZRG17P53735 605 aa5.24□□□□□ -1.57
RPT6YGL048C EGD1Q02642 157 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C RPN9Q04062 393 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C SPC2Q04969 178 aa5.24□□□□□ -1.57
RPT6YGL048C STP3Q05937 343 aa5.24□□□□□ -1.57
RPT6YGL048C RSA3Q05942 220 aaKnown RBP5.24□□□□□ -1.57
RPT6YGL048C YTM1Q12024 460 aaPredicted RBP5.24□□□□□ -1.57
RPT6YGL048C YOR012WQ12351 137 aa5.24□□□□□ -1.57
RPT6YGL048C GTT2Q12390 233 aa5.24□□□□□ -1.57
RPT6YGL048C GLT1Q12680 2145 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C STE2D6VTK4 431 aa5.23□□□□□ -1.57
RPT6YGL048C CDC9P04819 755 aa5.23□□□□□ -1.57
RPT6YGL048C ARG3P05150 338 aa5.23□□□□□ -1.57
RPT6YGL048C CDC36P06100 191 aaPredicted RBP5.23□□□□□ -1.57
RPT6YGL048C RAD1P06777 1100 aa5.23□□□□□ -1.57
RPT6YGL048C CMD1P06787 147 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C UNG1P12887 359 aa5.23□□□□□ -1.57
RPT6YGL048C NSP1P14907 823 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C ZUO1P32527 433 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C CDC13P32797 924 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C MRP8P35719 219 aa5.23□□□□□ -1.57
RPT6YGL048C YBR238CP38330 731 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C UBA4P38820 440 aa5.23□□□□□ -1.57
RPT6YGL048C UTP9P38882 575 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C YIL077CP40508 320 aa5.23□□□□□ -1.57
RPT6YGL048C NAS2P40555 220 aa5.23□□□□□ -1.57
RPT6YGL048C PET130P47065 347 aa5.23□□□□□ -1.57
RPT6YGL048C YJR096WP47137 282 aa5.23□□□□□ -1.57
RPT6YGL048C YDL183CP48569 320 aa5.23□□□□□ -1.57
RPT6YGL048C SNF12P53628 566 aa5.23□□□□□ -1.57
RPT6YGL048C RHO3Q00245 231 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C OSH6Q02201 448 aa5.23□□□□□ -1.57
RPT6YGL048C SPP2Q02521 185 aa5.23□□□□□ -1.57
RPT6YGL048C TPP1Q03796 238 aa5.23□□□□□ -1.57
RPT6YGL048C CTK1Q03957 528 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C ECM18Q04623 453 aa5.23□□□□□ -1.57
RPT6YGL048C RCO1Q04779 684 aa5.23□□□□□ -1.57
RPT6YGL048C BCP1Q06338 283 aa5.23□□□□□ -1.57
RPT6YGL048C PML1Q07930 204 aaPredicted RBP5.23□□□□□ -1.57
RPT6YGL048C PUS7Q08647 676 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C HAL9Q12180 1030 aa5.23□□□□□ -1.57
RPT6YGL048C PSY3Q12318 242 aa5.23□□□□□ -1.57
RPT6YGL048C RTN2Q12443 393 aa5.23□□□□□ -1.57
RPT6YGL048C HRP1Q99383 534 aaKnown RBP5.23□□□□□ -1.57
RPT6YGL048C SEM1O94742 89 aa5.22□□□□□ -1.57
RPT6YGL048C DAL82P21705 255 aa5.22□□□□□ -1.57
RPT6YGL048C MF(ALPHA)2P32435 120 aa5.22□□□□□ -1.57
RPT6YGL048C SUA5P32579 426 aa5.22□□□□□ -1.57
RPT6YGL048C UBC6P33296 250 aaPredicted RBP5.22□□□□□ -1.57
RPT6YGL048C GDH2P33327 1092 aaKnown RBP5.22□□□□□ -1.57
RPT6YGL048C TIP20P33891 701 aa5.22□□□□□ -1.57
RPT6YGL048C RRP1P35178 278 aaPredicted RBP5.22□□□□□ -1.57
RPT6YGL048C ARA1P38115 344 aa5.22□□□□□ -1.57
RPT6YGL048C YHR097CP38809 366 aaKnown RBP5.22□□□□□ -1.57
RPT6YGL048C OAF1P39720 1047 aaPredicted RBP5.22□□□□□ -1.57
RPT6YGL048C LOC1P43586 204 aaPredicted RBP5.22□□□□□ -1.57
RPT6YGL048C YJR039WP47107 1121 aa5.22□□□□□ -1.57
RPT6YGL048C PRO2P54885 456 aaKnown RBP5.22□□□□□ -1.57
RPT6YGL048C SLT2Q00772 484 aa5.22□□□□□ -1.57
RPT6YGL048C TRM12Q04235 462 aa5.22□□□□□ -1.57
RPT6YGL048C YMR027WQ04371 470 aa5.22□□□□□ -1.57
RPT6YGL048C CDC123Q05791 360 aa5.22□□□□□ -1.57
RPT6YGL048C VTA1Q06263 330 aa5.22□□□□□ -1.57
RPT6YGL048C ATG17Q06410 417 aa5.22□□□□□ -1.57
RPT6YGL048C NUS1Q12063 375 aa5.22□□□□□ -1.57
RPT6YGL048C MRH1Q12117 320 aaPredicted RBP5.22□□□□□ -1.57
RPT6YGL048C UPC2Q12151 913 aa5.22□□□□□ -1.57
RPT6YGL048C SEC62P21825 274 aa5.21□□□□□ -1.58
RPT6YGL048C PHO91P27514 894 aa5.21□□□□□ -1.58
RPT6YGL048C YJU2P28320 278 aaPredicted RBP5.21□□□□□ -1.58
RPT6YGL048C YHR182WP38870 785 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms