RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W RPF2P36160 344 aaKnown RBP5.83□□□□□ -1.48
RPT3YDR394W ATG14P38270 344 aa5.83□□□□□ -1.48
RPT3YDR394W PTC7P38797 343 aa5.83□□□□□ -1.48
RPT3YDR394W MNN9P39107 395 aaKnown RBP5.83□□□□□ -1.48
RPT3YDR394W TIM17P39515 158 aa5.83□□□□□ -1.48
RPT3YDR394W ERV46P39727 415 aa5.83□□□□□ -1.48
RPT3YDR394W YJL070CP40361 888 aa5.83□□□□□ -1.48
RPT3YDR394W ECL1P48235 211 aa5.83□□□□□ -1.48
RPT3YDR394W GPI8P49018 411 aa5.83□□□□□ -1.48
RPT3YDR394W ATP22P50273 684 aaPredicted RBP5.83□□□□□ -1.48
RPT3YDR394W SHE4P51534 789 aa5.83□□□□□ -1.48
RPT3YDR394W PYK2P52489 506 aaKnown RBP5.83□□□□□ -1.48
RPT3YDR394W MPS2P53159 387 aa5.83□□□□□ -1.48
RPT3YDR394W YGR015CP53208 328 aa5.83□□□□□ -1.48
RPT3YDR394W PXR1P53335 271 aaPredicted RBP5.83□□□□□ -1.48
RPT3YDR394W GOR1P53839 350 aa5.83□□□□□ -1.48
RPT3YDR394W VAC7P53950 1165 aa5.83□□□□□ -1.48
RPT3YDR394W YNL034WP53963 612 aa5.83□□□□□ -1.48
RPT3YDR394W RRP15Q06511 250 aaPredicted RBP5.83□□□□□ -1.48
RPT3YDR394W GRS2Q06817 618 aa5.83□□□□□ -1.48
RPT3YDR394W IES3Q12345 250 aa5.83□□□□□ -1.48
RPT3YDR394W MHT1Q12525 324 aa5.83□□□□□ -1.48
RPT3YDR394W BRR1Q99177 341 aaPredicted RBP5.83□□□□□ -1.48
RPT3YDR394W Q0010Q9ZZX9 128 aa5.83□□□□□ -1.48
RPT3YDR394W YLR422WQ06409 1932 aa5.83□□□□□ -1.48
RPT3YDR394W ATP4P05626 244 aa5.82□□□□□ -1.48
RPT3YDR394W GAL3P13045 520 aa5.82□□□□□ -1.48
RPT3YDR394W KIN3P22209 435 aa5.82□□□□□ -1.48
RPT3YDR394W PRE9P23638 258 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W CLB2P24869 491 aa5.82□□□□□ -1.48
RPT3YDR394W RNQ1P25367 405 aa5.82□□□□□ -1.48
RPT3YDR394W URK1P27515 501 aa5.82□□□□□ -1.48
RPT3YDR394W TFB1P32776 642 aa5.82□□□□□ -1.48
RPT3YDR394W MRPL6P32904 214 aa5.82□□□□□ -1.48
RPT3YDR394W ATO2P32907 282 aa5.82□□□□□ -1.48
RPT3YDR394W UTP11P34247 250 aaPredicted RBP5.82□□□□□ -1.48
RPT3YDR394W GIC1P38785 314 aa5.82□□□□□ -1.48
RPT3YDR394W SWD1P39706 426 aa5.82□□□□□ -1.48
RPT3YDR394W UTP18P40362 594 aaPredicted RBP5.82□□□□□ -1.48
RPT3YDR394W FAR7P43592 221 aa5.82□□□□□ -1.48
RPT3YDR394W YFR018CP43599 363 aa5.82□□□□□ -1.48
RPT3YDR394W YJR030CP47101 745 aa5.82□□□□□ -1.48
RPT3YDR394W YJR149WP47177 404 aa5.82□□□□□ -1.48
RPT3YDR394W RBL2P48606 106 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W SWC4P53201 476 aa5.82□□□□□ -1.48
RPT3YDR394W YGR054WP53235 642 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W YNL140CP53910 189 aa5.82□□□□□ -1.48
RPT3YDR394W TGL2P54857 326 aa5.82□□□□□ -1.48
RPT3YDR394W SED5Q01590 340 aa5.82□□□□□ -1.48
RPT3YDR394W RRN5Q02983 363 aa5.82□□□□□ -1.48
RPT3YDR394W EMI1Q04406 187 aa5.82□□□□□ -1.48
RPT3YDR394W ATG38Q05789 226 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W DBP9Q06218 594 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W DTD1Q07648 150 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W FLC1Q08967 793 aa5.82□□□□□ -1.48
RPT3YDR394W YPL245WQ12179 454 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W RPN5Q12250 445 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W PST1Q12355 444 aa5.82□□□□□ -1.48
RPT3YDR394W WTM1Q12363 437 aaKnown RBP5.82□□□□□ -1.48
RPT3YDR394W RIB3Q99258 208 aa5.82□□□□□ -1.48
RPT3YDR394W VCX1Q99385 411 aa5.82□□□□□ -1.48
RPT3YDR394W YAP1P19880 650 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W URE2P23202 354 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W SGV1P23293 657 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W UBC8P28263 218 aa5.81□□□□□ -1.48
RPT3YDR394W NTG1P31378 399 aa5.81□□□□□ -1.48
RPT3YDR394W SOL2P37262 315 aa5.81□□□□□ -1.48
RPT3YDR394W ECM8P38246 354 aa5.81□□□□□ -1.48
RPT3YDR394W IML3P38265 245 aa5.81□□□□□ -1.48
RPT3YDR394W TSL1P38427 1098 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W SSZ1P38788 538 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W EGD2P38879 174 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W RPS26AP39938 119 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W RPS26BP39939 119 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W MOB1P40484 314 aa5.81□□□□□ -1.48
RPT3YDR394W ERG10P41338 398 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W IRC5P43610 853 aa5.81□□□□□ -1.48
RPT3YDR394W GUS1P46655 708 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
RPT3YDR394W ZRG17P53735 605 aa5.81□□□□□ -1.48
RPT3YDR394W GIP3Q03016 1276 aa5.81□□□□□ -1.48
RPT3YDR394W YMR099CQ03161 297 aaKnown RBP5.81□□□□□ -1.48
RPT3YDR394W RSN1Q03516 953 aa5.81□□□□□ -1.48
RPT3YDR394W YMR034CQ05131 434 aaPredicted RBP5.81□□□□□ -1.48
RPT3YDR394W VPS74Q06385 345 aa5.81□□□□□ -1.48
RPT3YDR394W HDA2Q06629 674 aa5.81□□□□□ -1.48
RPT3YDR394W REH1Q06709 432 aa5.81□□□□□ -1.48
RPT3YDR394W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
RPT3YDR394W YOL131WQ08270 108 aa5.81□□□□□ -1.48
RPT3YDR394W NMD4Q12129 218 aa5.81□□□□□ -1.48
RPT3YDR394W YPR011CQ12251 326 aa5.81□□□□□ -1.48
RPT3YDR394W HER1Q12276 1246 aa5.81□□□□□ -1.48
RPT3YDR394W SNF8Q12483 233 aa5.81□□□□□ -1.48
RPT3YDR394W SRN2Q99176 213 aa5.81□□□□□ -1.48
RPT3YDR394W MED11Q99278 115 aa5.81□□□□□ -1.48
RPT3YDR394W YPR096CO13587 100 aa5.8□□□□□ -1.48
RPT3YDR394W REP1P03871 373 aa5.8□□□□□ -1.48
RPT3YDR394W CLN2P20438 545 aa5.8□□□□□ -1.48
RPT3YDR394W SLM5P25345 492 aaKnown RBP5.8□□□□□ -1.48
RPT3YDR394W PPZ1P26570 692 aa5.8□□□□□ -1.48
RPT3YDR394W ATP11P32453 318 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms