RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W PRM5P40476 318 aa0.89□□□□□ -2.27
BFR2YDR299W DOT5P40553 215 aa0.89□□□□□ -2.27
BFR2YDR299W GCD10P41814 478 aa0.89□□□□□ -2.27
BFR2YDR299W YGL138CP53122 345 aa0.89□□□□□ -2.27
BFR2YDR299W DRN1P53255 507 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W VPS9P54787 451 aa0.89□□□□□ -2.27
BFR2YDR299W TAF11Q04226 346 aa0.89□□□□□ -2.27
BFR2YDR299W TAP42Q04372 366 aa0.89□□□□□ -2.27
BFR2YDR299W LOT6Q07923 191 aa0.89□□□□□ -2.27
BFR2YDR299W BUD21Q08492 214 aaPredicted RBP0.89□□□□□ -2.27
BFR2YDR299W RBD2Q12270 262 aa0.89□□□□□ -2.27
BFR2YDR299W JID1Q12350 301 aa0.89□□□□□ -2.27
BFR2YDR299W HIF1Q12373 385 aa0.89□□□□□ -2.27
BFR2YDR299W YLR278CQ05854 1341 aa0.89□□□□□ -2.27
BFR2YDR299W RPL3P14126 387 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W SPO12P17123 173 aa0.89□□□□□ -2.27
BFR2YDR299W RPB5P20434 215 aa0.89□□□□□ -2.27
BFR2YDR299W CPR4P25334 318 aa0.89□□□□□ -2.27
BFR2YDR299W POP5P28005 173 aa0.89□□□□□ -2.27
BFR2YDR299W ERG3P32353 365 aa0.89□□□□□ -2.27
BFR2YDR299W NIP1P32497 812 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W YME2P32843 850 aa0.89□□□□□ -2.27
BFR2YDR299W MNS1P32906 549 aa0.89□□□□□ -2.27
BFR2YDR299W UTH1P36135 365 aa0.89□□□□□ -2.27
BFR2YDR299W GDT1P38301 280 aaPredicted RBP0.89□□□□□ -2.27
BFR2YDR299W SGN1P40561 250 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
BFR2YDR299W SSU1P41930 458 aa0.89□□□□□ -2.27
BFR2YDR299W WWM1P43582 211 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W RRT5P43607 289 aa0.89□□□□□ -2.27
BFR2YDR299W AIP1P46680 615 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W BRO1P48582 844 aa0.89□□□□□ -2.27
BFR2YDR299W AVT4P50944 713 aa0.89□□□□□ -2.27
BFR2YDR299W PCP1P53259 346 aa0.89□□□□□ -2.27
BFR2YDR299W SHY1P53266 389 aa0.89□□□□□ -2.27
BFR2YDR299W TOF1P53840 1238 aa0.89□□□□□ -2.27
BFR2YDR299W CWC25P53854 179 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W MTQ1P53944 314 aa0.89□□□□□ -2.27
BFR2YDR299W TIM10P87108 93 aa0.89□□□□□ -2.27
BFR2YDR299W SYF1Q04048 859 aaPredicted RBP0.89□□□□□ -2.27
BFR2YDR299W YDR387CQ04162 555 aa0.89□□□□□ -2.27
BFR2YDR299W PRM6Q04705 352 aa0.89□□□□□ -2.27
BFR2YDR299W HRI1Q05905 244 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W TSR1Q07381 788 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W CMS1Q07897 291 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W THP3Q12049 470 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W VAM3Q12241 283 aa0.89□□□□□ -2.27
BFR2YDR299W TPT1Q12272 230 aaKnown RBP0.89□□□□□ -2.27
BFR2YDR299W ATG34Q12292 412 aa0.89□□□□□ -2.27
BFR2YDR299W YRF1-4O13559 1382 aa0.88□□□□□ -2.27
BFR2YDR299W SAM1P10659 382 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W SAM2P19358 384 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W CTR86P25355 563 aa0.88□□□□□ -2.27
BFR2YDR299W SNT1P25357 1226 aa0.88□□□□□ -2.27
BFR2YDR299W YCR051WP25631 222 aa0.88□□□□□ -2.27
BFR2YDR299W BRF1P29056 596 aa0.88□□□□□ -2.27
BFR2YDR299W HSP104P31539 908 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W SMY1P32364 656 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W HXT3P32466 567 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W RML2P32611 393 aa0.88□□□□□ -2.27
BFR2YDR299W TFB1P32776 642 aa0.88□□□□□ -2.27
BFR2YDR299W APE3P37302 537 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W ATP3P38077 311 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W THI2P38141 450 aa0.88□□□□□ -2.27
BFR2YDR299W RRN10P38204 145 aa0.88□□□□□ -2.27
BFR2YDR299W RFC3P38629 340 aa0.88□□□□□ -2.27
BFR2YDR299W YHR131CP38835 850 aa0.88□□□□□ -2.27
BFR2YDR299W COX14P39103 70 aa0.88□□□□□ -2.27
BFR2YDR299W YAL037WP39728 267 aa0.88□□□□□ -2.27
BFR2YDR299W NDE1P40215 560 aa0.88□□□□□ -2.27
BFR2YDR299W MAM33P40513 266 aa0.88□□□□□ -2.27
BFR2YDR299W CAK1P43568 368 aaPredicted RBP0.88□□□□□ -2.27
BFR2YDR299W RPS0BP46654 252 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W TRS85P46944 698 aa0.88□□□□□ -2.27
BFR2YDR299W SFH5P47008 294 aa0.88□□□□□ -2.27
BFR2YDR299W HMS2P47175 358 aa0.88□□□□□ -2.27
BFR2YDR299W TOM22P49334 152 aa0.88□□□□□ -2.27
BFR2YDR299W ART5P53244 586 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W RHO5P53879 331 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W GPI15P53961 229 aa0.88□□□□□ -2.27
BFR2YDR299W RPA49Q01080 415 aaPredicted RBP0.88□□□□□ -2.27
BFR2YDR299W HAL1Q01766 294 aa0.88□□□□□ -2.27
BFR2YDR299W MMT1Q03218 510 aa0.88□□□□□ -2.27
BFR2YDR299W PRP3Q03338 469 aaPredicted RBP0.88□□□□□ -2.27
BFR2YDR299W BET5Q03630 159 aa0.88□□□□□ -2.27
BFR2YDR299W RPN9Q04062 393 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W PPM1Q04081 328 aa0.88□□□□□ -2.27
BFR2YDR299W YMR130WQ04223 302 aa0.88□□□□□ -2.27
BFR2YDR299W WTM1Q12363 437 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W HTZ1Q12692 134 aaKnown RBP0.88□□□□□ -2.27
BFR2YDR299W MTR10Q99189 972 aa0.88□□□□□ -2.27
BFR2YDR299W ADH2P00331 348 aaKnown RBP0.87□□□□□ -2.27
BFR2YDR299W MET17P06106 444 aa0.87□□□□□ -2.27
BFR2YDR299W URA4P20051 364 aa0.87□□□□□ -2.27
BFR2YDR299W CPR2P23285 205 aa0.87□□□□□ -2.27
BFR2YDR299W PPH22P23595 377 aa0.87□□□□□ -2.27
BFR2YDR299W PCL1P24867 279 aa0.87□□□□□ -2.27
BFR2YDR299W RAD57P25301 460 aa0.87□□□□□ -2.27
BFR2YDR299W RHB1P25378 209 aa0.87□□□□□ -2.27
BFR2YDR299W BEM1P29366 551 aa0.87□□□□□ -2.27
BFR2YDR299W DBF4P32325 704 aa0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms