RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W RIB1P38066 345 aa6.73□□□□□ -1.33
NUP84YDL116W MAK5P38112 773 aaPredicted RBP6.73□□□□□ -1.33
NUP84YDL116W YBR184WP38299 523 aa6.73□□□□□ -1.33
NUP84YDL116W RCK1P38622 512 aa6.73□□□□□ -1.33
NUP84YDL116W LEU5P38702 357 aa6.73□□□□□ -1.33
NUP84YDL116W FHL1P39521 936 aa6.73□□□□□ -1.33
NUP84YDL116W SSU1P41930 458 aa6.73□□□□□ -1.33
NUP84YDL116W BNA6P43619 295 aa6.73□□□□□ -1.33
NUP84YDL116W YJR098CP47139 656 aa6.73□□□□□ -1.33
NUP84YDL116W ECL1P48235 211 aa6.73□□□□□ -1.33
NUP84YDL116W MTR3P48240 250 aaPredicted RBP6.73□□□□□ -1.33
NUP84YDL116W HST3P53687 447 aa6.73□□□□□ -1.33
NUP84YDL116W MRPL50P53724 139 aa6.73□□□□□ -1.33
NUP84YDL116W EFM6P53970 246 aa6.73□□□□□ -1.33
NUP84YDL116W ELP4Q02884 456 aaKnown RBP6.73□□□□□ -1.33
NUP84YDL116W ECM22Q05958 814 aaPredicted RBP6.73□□□□□ -1.33
NUP84YDL116W TMA17Q12513 150 aa6.73□□□□□ -1.33
NUP84YDL116W MDM12Q92328 271 aa6.73□□□□□ -1.33
NUP84YDL116W SPT3P06844 337 aa6.72□□□□□ -1.33
NUP84YDL116W CDC4P07834 779 aa6.72□□□□□ -1.33
NUP84YDL116W KGD2P19262 463 aaPredicted RBP6.72□□□□□ -1.33
NUP84YDL116W SGV1P23293 657 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W JEN1P36035 616 aa6.72□□□□□ -1.33
NUP84YDL116W PAC11P40960 533 aa6.72□□□□□ -1.33
NUP84YDL116W TPN1P53099 579 aa6.72□□□□□ -1.33
NUP84YDL116W YGR168CP53293 376 aa6.72□□□□□ -1.33
NUP84YDL116W YNL143CP53908 130 aa6.72□□□□□ -1.33
NUP84YDL116W HER2Q03557 464 aa6.72□□□□□ -1.33
NUP84YDL116W RRP45Q05636 305 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W RSC3Q06639 885 aa6.72□□□□□ -1.33
NUP84YDL116W YLR413WQ06689 675 aa6.72□□□□□ -1.33
NUP84YDL116W MCA1Q08601 432 aa6.72□□□□□ -1.33
NUP84YDL116W BAG7Q12128 409 aa6.72□□□□□ -1.33
NUP84YDL116W RIB3Q99258 208 aa6.72□□□□□ -1.33
NUP84YDL116W LEU1P07264 779 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W NDC1P32500 655 aa6.72□□□□□ -1.33
NUP84YDL116W IRS4P36115 615 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W STB5P38699 743 aa6.72□□□□□ -1.33
NUP84YDL116W PCL6P40038 420 aa6.72□□□□□ -1.33
NUP84YDL116W YER137CP40083 148 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W GAB1P41733 394 aa6.72□□□□□ -1.33
NUP84YDL116W QRI7P43122 407 aa6.72□□□□□ -1.33
NUP84YDL116W GLG2P47011 380 aa6.72□□□□□ -1.33
NUP84YDL116W YJR120WP47157 116 aa6.72□□□□□ -1.33
NUP84YDL116W PRP24P49960 444 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W MET13P53128 600 aa6.72□□□□□ -1.33
NUP84YDL116W IDP3P53982 420 aaKnown RBP6.72□□□□□ -1.33
NUP84YDL116W RRP17Q04031 235 aaPredicted RBP6.72□□□□□ -1.33
NUP84YDL116W DCI1Q08558 271 aa6.72□□□□□ -1.33
NUP84YDL116W LCB4Q12246 624 aa6.72□□□□□ -1.33
NUP84YDL116W TY4B-PA0A0B7P3V8 1104 aa6.71□□□□□ -1.33
NUP84YDL116W HVG1P0CE11 249 aa6.71□□□□□ -1.33
NUP84YDL116W CAP2P13517 287 aa6.71□□□□□ -1.33
NUP84YDL116W SEN2P16658 377 aa6.71□□□□□ -1.33
NUP84YDL116W PRP2P20095 876 aaPredicted RBP6.71□□□□□ -1.33
NUP84YDL116W SPT14P32363 452 aa6.71□□□□□ -1.33
NUP84YDL116W DUR3P33413 735 aa6.71□□□□□ -1.33
NUP84YDL116W SCD5P34758 872 aa6.71□□□□□ -1.33
NUP84YDL116W LDB7P38210 180 aa6.71□□□□□ -1.33
NUP84YDL116W YHL041WP38730 149 aa6.71□□□□□ -1.33
NUP84YDL116W YHR045WP38775 560 aa6.71□□□□□ -1.33
NUP84YDL116W YAP1801P38856 637 aa6.71□□□□□ -1.33
NUP84YDL116W BST1P43571 1029 aa6.71□□□□□ -1.33
NUP84YDL116W GAT1P43574 510 aa6.71□□□□□ -1.33
NUP84YDL116W JHD2P47156 728 aaPredicted RBP6.71□□□□□ -1.33
NUP84YDL116W ARH1P48360 493 aa6.71□□□□□ -1.33
NUP84YDL116W SHY1P53266 389 aa6.71□□□□□ -1.33
NUP84YDL116W DID2P69771 204 aa6.71□□□□□ -1.33
NUP84YDL116W SPP2Q02521 185 aa6.71□□□□□ -1.33
NUP84YDL116W PDR8Q06149 701 aa6.71□□□□□ -1.33
NUP84YDL116W DBP9Q06218 594 aaKnown RBP6.71□□□□□ -1.33
NUP84YDL116W CLB3P24870 427 aa6.71□□□□□ -1.34
NUP84YDL116W CHA1P25379 360 aaKnown RBP6.71□□□□□ -1.34
NUP84YDL116W MF(ALPHA)2P32435 120 aa6.71□□□□□ -1.34
NUP84YDL116W RPS1AP33442 255 aaKnown RBP6.71□□□□□ -1.34
NUP84YDL116W GPT2P36148 743 aa6.71□□□□□ -1.34
NUP84YDL116W ARA1P38115 344 aa6.71□□□□□ -1.34
NUP84YDL116W RAD55P38953 406 aa6.71□□□□□ -1.34
NUP84YDL116W TIM17P39515 158 aa6.71□□□□□ -1.34
NUP84YDL116W RRD1P40454 393 aaKnown RBP6.71□□□□□ -1.34
NUP84YDL116W SPP1Q03012 353 aa6.71□□□□□ -1.34
NUP84YDL116W MFG1Q07684 458 aa6.71□□□□□ -1.34
NUP84YDL116W PLB3Q08108 686 aa6.71□□□□□ -1.34
NUP84YDL116W IRC10Q08118 586 aa6.71□□□□□ -1.34
NUP84YDL116W RRG7Q08774 242 aaPredicted RBP6.71□□□□□ -1.34
NUP84YDL116W FRE5Q08908 694 aa6.71□□□□□ -1.34
NUP84YDL116W SMF3Q12078 473 aaPredicted RBP6.71□□□□□ -1.34
NUP84YDL116W SVS1Q12254 260 aa6.71□□□□□ -1.34
NUP84YDL116W LPX1Q12405 387 aaKnown RBP6.71□□□□□ -1.34
NUP84YDL116W MHT1Q12525 324 aa6.71□□□□□ -1.34
NUP84YDL116W YGL194C-AQ2V2P6 80 aa6.71□□□□□ -1.34
NUP84YDL116W SRN2Q99176 213 aa6.71□□□□□ -1.34
NUP84YDL116W URA3P03962 267 aa6.7□□□□□ -1.34
NUP84YDL116W RAD52P06778 471 aaKnown RBP6.7□□□□□ -1.34
NUP84YDL116W YCL049CP25577 312 aa6.7□□□□□ -1.34
NUP84YDL116W CYS3P31373 394 aaKnown RBP6.7□□□□□ -1.34
NUP84YDL116W PHO11P35842 467 aa6.7□□□□□ -1.34
NUP84YDL116W CBP4P37267 147 aa6.7□□□□□ -1.34
NUP84YDL116W KTR4P38131 464 aa6.7□□□□□ -1.34
NUP84YDL116W YBR137WP38276 179 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms