RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	OCA4	P25366	362 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	DPB3	P27344	201 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	CMC1	P36064	111 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	MRPS9	P38120	278 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	PFS2	P42841	465 aa	Known RBP	1.2	□□□□□ -2.22
HMRA2	YCR096C	RMD8	P43620	662 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	DSL1	P53847	754 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	JJJ1	P53863	590 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	MUM3	Q08750	479 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	ORT1	Q12375	292 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	RTP1	Q12751	981 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	YOL159C-A	Q3E769	90 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	MET17	P06106	444 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	RIP1	P08067	215 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	POP5	P28005	173 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	KAR9	P32526	644 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	MUD1	P32605	298 aa	Known RBP	1.19	□□□□□ -2.22
HMRA2	YCR096C	LYS1	P38998	373 aa	RIP-Chip data	1.19	□□□□□ -2.22	not detected
HMRA2	YCR096C	DFG10	P40526	253 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	AZR1	P50080	613 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	YNR048W	P53740	393 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	HSP31	Q04432	237 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	MDM30	Q05930	598 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	YRM1	Q12340	786 aa		1.19	□□□□□ -2.22
HMRA2	YCR096C	TEF1	P02994	458 aa	Known RBP	1.18	□□□□□ -2.22
HMRA2	YCR096C	SPO12	P17123	173 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	IES6	P32617	166 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	FMT1	P32785	401 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	VHC1	P38329	1120 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	RFC3	P38629	340 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	SMF1	P38925	575 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	MIG3	P39943	394 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	YER186C	P40101	306 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	VTC2	P43585	828 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	ECM27	P47144	725 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	HMS2	P47175	358 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	FLC3	P53121	802 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	RMD9	P53140	646 aa	Known RBP	1.18	□□□□□ -2.22
HMRA2	YCR096C	MKC7	P53379	596 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	RPA49	Q01080	415 aa	Predicted RBP	1.18	□□□□□ -2.22
HMRA2	YCR096C	YMR181C	Q03231	154 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	RQC1	Q05468	723 aa	Known RBP	1.18	□□□□□ -2.22
HMRA2	YCR096C	LIP2	Q06005	328 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	RIM20	Q12033	661 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	GRX6	Q12438	231 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	RMD5	Q12508	421 aa		1.18	□□□□□ -2.22
HMRA2	YCR096C	HIS4	P00815	799 aa	Known RBP	1.17	□□□□□ -2.22
HMRA2	YCR096C	SPS4	P09937	338 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SNT1	P25357	1226 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SIN4	P32259	974 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	IMP2'	P32351	346 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	HIR2	P32480	875 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	IME2	P32581	645 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SAS3	P34218	831 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SOR1	P35497	357 aa	Known RBP	1.17	□□□□□ -2.22
HMRA2	YCR096C	ARA1	P38115	344 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	YHR054C	P38780	354 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	JLP2	P40206	208 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	ESL1	P40456	1118 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SSN8	P47821	323 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	CRH1	P53301	507 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	BET5	Q03630	159 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	AIM32	Q04689	311 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SOR2	Q07786	357 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	MED1	Q12321	566 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	IZH2	Q12442	317 aa		1.17	□□□□□ -2.22
HMRA2	YCR096C	SAL1	D6W196	494 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	ARG4	P04076	463 aa	Predicted RBP	1.16	□□□□□ -2.22
HMRA2	YCR096C	GPH1	P06738	902 aa	Known RBP	1.16	□□□□□ -2.22
HMRA2	YCR096C	ROX1	P25042	368 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	CTR86	P25355	563 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	GEX1	P25596	615 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	BEM1	P29366	551 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	RML2	P32611	393 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	GYP6	P32806	458 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	REC114	P32841	428 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	SBE22	P38814	852 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	BAT1	P38891	393 aa	Known RBP	1.16	□□□□□ -2.22
HMRA2	YCR096C	RPS0B	P46654	252 aa	Known RBP	1.16	□□□□□ -2.22
HMRA2	YCR096C	PGU1	P47180	361 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	RHO5	P53879	331 aa	Known RBP	1.16	□□□□□ -2.22
HMRA2	YCR096C	ADA2	Q02336	434 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	MRPS16	Q02608	121 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	NUP116	Q02630	1113 aa		1.16	□□□□□ -2.22
HMRA2	YCR096C	ARX1	Q03862	593 aa	Known RBP	1.16	□□□□□ -2.22
HMRA2	YCR096C	TOP1	P04786	769 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	NAM2	P11325	894 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	RHB1	P25378	209 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	SPT10	P35208	640 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	RRP4	P38792	359 aa	Known RBP	1.15	□□□□□ -2.23
HMRA2	YCR096C	GPI15	P53961	229 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	OAZ1	Q02803	292 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	GIP3	Q03016	1276 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	BCH1	Q05029	724 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	SNT309	Q06091	175 aa	Predicted RBP	1.15	□□□□□ -2.23
HMRA2	YCR096C	YDL121C	Q07541	149 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	SRL2	Q12020	392 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	RRI2	Q12348	645 aa		1.15	□□□□□ -2.23
HMRA2	YCR096C	PGA3	Q12746	312 aa	Known RBP	1.15	□□□□□ -2.23
HMRA2	YCR096C	IMA3	P0CW40	589 aa		1.14	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms